NP-MRD: Showing NP-Card for Miaolinolide (NP0011510)

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Record Information

Version

2.0

Created at

2021-01-05 21:10:32 UTC

Updated at

2021-07-15 17:09:09 UTC

NP-MRD ID

NP0011510

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Miaolinolide

Provided By

NPAtlas

Description

Miaolinolide is found in Actinomadura and Actinomadura miaoliensis. Miaolinolide was first documented in 2013 (PMID: 23418178). Based on a literature review very few articles have been published on (3Z,4R)-4-hydroxy-3-icosylidene-5-methylideneoxolan-2-one.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242116563D          

 72 72  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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 25 67  1  0
 26 68  1  0
 26 69  1  0
 26 70  1  0
 27 71  1  1
 28 72  1  0
M  END


  Mrv1652306242116563D          

 72 72  0  0  0  0            999 V2000
   10.0503    0.4429    1.8304 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9046   -0.1944    1.7560 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7290    0.1292    2.4480 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6107   -0.3252    1.7172 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4002   -0.2084    2.0371 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1504   -0.9584    0.5167 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5613   -1.0797   -0.6288 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2144   -0.5721   -0.8792 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.2477    0.4643   -1.9824 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.9231    1.0410   -2.3120 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.2824    1.7283   -1.1587 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9411    2.3332   -1.5041 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.9277    1.3560   -1.9899 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.6309    0.2785   -0.9799 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1115    0.8473    0.2883 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1478    1.6217    0.0591 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.2238    0.7841   -0.5543 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.5612   -0.3983    0.2936 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.0105    0.0365    1.6565 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.2134    0.9069    1.5623 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.3507    0.2082    0.8689 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.7236   -1.0309    1.6264 C   0  0  2  0  0  0  0  0  0  0  0  0
   -6.8590   -1.7229    0.9161 C   0  0  1  0  0  0  0  0  0  0  0  0
   -8.0478   -0.7910    0.8634 C   0  0  1  0  0  0  0  0  0  0  0  0
   -9.1510   -1.5963    0.1464 C   0  0  2  0  0  0  0  0  0  0  0  0
   -8.6228   -1.9461   -1.2135 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5194   -1.4038    0.9473 C   0  0  1  0  0  0  0  0  0  0  0  0
    9.3276   -1.5396   -0.1493 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.1840    1.3202    2.4695 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.9246    0.1497    1.2779 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1123   -1.5871   -1.4348 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6466   -0.1926   -0.0525 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6432   -1.4424   -1.3361 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5834   -0.1142   -2.8964 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0234    1.2226   -1.8156 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0819    1.8113   -3.1071 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2412    0.2358   -2.6568 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0934    1.0320   -0.3027 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9527    2.5332   -0.7935 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5178    2.8955   -0.6503 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1213    3.1190   -2.2959 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0171    1.9300   -2.2595 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2336    0.8544   -2.9435 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1286   -0.4407   -1.3864 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5709   -0.3305   -0.7952 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1221    0.0467    1.0439 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9052    1.5285    0.7065 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5012    2.1037    1.0222 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9859    2.4967   -0.6256 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1775    1.3855   -0.6757 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9242    0.4137   -1.5804 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6526   -1.0367    0.3825 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3735   -0.9671   -0.2390 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1424   -0.8721    2.2958 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2152    0.6286    2.1793 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6090    1.1793    2.5912 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9455    1.8675    1.0967 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1689   -0.0175   -0.1940 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2097    0.9404    0.8841 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1448   -0.7364    2.6331 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8558   -1.7127    1.7613 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5321   -2.0081   -0.1164 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0868   -2.6371    1.5112 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4421   -0.5729    1.8581 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8744    0.1057    0.2536 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0199   -0.9116    0.1226 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3560   -2.4459    0.8058 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1902   -2.9651   -1.1703 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8409   -1.2337   -1.5379 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.4667   -1.8761   -1.9354 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.4762   -2.2487    1.6324 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.0168   -2.2354    0.0918 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  4  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
  6 27  1  0  0  0  0
 27 28  1  0  0  0  0
 27  2  1  0  0  0  0
  1 29  1  0  0  0  0
  1 30  1  0  0  0  0
  7 31  1  0  0  0  0
  8 32  1  0  0  0  0
  8 33  1  0  0  0  0
  9 34  1  0  0  0  0
  9 35  1  0  0  0  0
 10 36  1  0  0  0  0
 10 37  1  0  0  0  0
 11 38  1  0  0  0  0
 11 39  1  0  0  0  0
 12 40  1  0  0  0  0
 12 41  1  0  0  0  0
 13 42  1  0  0  0  0
 13 43  1  0  0  0  0
 14 44  1  0  0  0  0
 14 45  1  0  0  0  0
 15 46  1  0  0  0  0
 15 47  1  0  0  0  0
 16 48  1  0  0  0  0
 16 49  1  0  0  0  0
 17 50  1  0  0  0  0
 17 51  1  0  0  0  0
 18 52  1  0  0  0  0
 18 53  1  0  0  0  0
 19 54  1  0  0  0  0
 19 55  1  0  0  0  0
 20 56  1  0  0  0  0
 20 57  1  0  0  0  0
 21 58  1  0  0  0  0
 21 59  1  0  0  0  0
 22 60  1  0  0  0  0
 22 61  1  0  0  0  0
 23 62  1  0  0  0  0
 23 63  1  0  0  0  0
 24 64  1  0  0  0  0
 24 65  1  0  0  0  0
 25 66  1  0  0  0  0
 25 67  1  0  0  0  0
 26 68  1  0  0  0  0
 26 69  1  0  0  0  0
 26 70  1  0  0  0  0
 27 71  1  1  0  0  0
 28 72  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0011510

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@@]1([H])C(OC(=O)\C1=C(\[H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H])=C([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C25H44O3/c1-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-23-24(26)22(2)28-25(23)27/h21,24,26H,2-20H2,1H3/b23-21-/t24-/m0/s1

> <INCHI_KEY>
VJDSJBHPTKUESZ-WEPATYSUSA-N

> <FORMULA>
C25H44O3

> <MOLECULAR_WEIGHT>
392.624

> <EXACT_MASS>
392.329045277

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
72

> <JCHEM_AVERAGE_POLARIZABILITY>
49.4443112001763

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(3Z,4R)-4-hydroxy-3-icosylidene-5-methylideneoxolan-2-one

> <ALOGPS_LOGP>
8.99

> <JCHEM_LOGP>
8.524272928000002

> <ALOGPS_LOGS>
-6.87

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
11.968293103937235

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.379884274877147

> <JCHEM_PKA_STRONGEST_BASIC>
-3.6642440151797535

> <JCHEM_POLAR_SURFACE_AREA>
46.53

> <JCHEM_REFRACTIVITY>
119.14769999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
18

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
5.28e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(3Z,4R)-4-hydroxy-3-icosylidene-5-methylideneoxolan-2-one

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 72 72  0  0  0  0  0  0  0  0999 V2000
   10.0503    0.4429    1.8304 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9046   -0.1944    1.7560 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7290    0.1292    2.4480 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6107   -0.3252    1.7172 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4002   -0.2084    2.0371 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1504   -0.9584    0.5167 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5613   -1.0797   -0.6288 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2144   -0.5721   -0.8792 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2477    0.4643   -1.9824 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9231    1.0410   -2.3120 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2824    1.7283   -1.1587 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9411    2.3332   -1.5041 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9277    1.3560   -1.9899 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6309    0.2785   -0.9799 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1115    0.8473    0.2883 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1478    1.6217    0.0591 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2238    0.7841   -0.5543 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5612   -0.3983    0.2936 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0105    0.0365    1.6565 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2134    0.9069    1.5623 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3507    0.2082    0.8689 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7236   -1.0309    1.6264 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8590   -1.7229    0.9161 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0478   -0.7910    0.8634 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.1510   -1.5963    0.1464 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6228   -1.9461   -1.2135 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5194   -1.4038    0.9473 C   0  0  1  0  0  0  0  0  0  0  0  0
    9.3276   -1.5396   -0.1493 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.1840    1.3202    2.4695 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.9246    0.1497    1.2779 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1123   -1.5871   -1.4348 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6466   -0.1926   -0.0525 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6432   -1.4424   -1.3361 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5834   -0.1142   -2.8964 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0234    1.2226   -1.8156 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0819    1.8113   -3.1071 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2412    0.2358   -2.6568 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0934    1.0320   -0.3027 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9527    2.5332   -0.7935 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5178    2.8955   -0.6503 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1213    3.1190   -2.2959 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0171    1.9300   -2.2595 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2336    0.8544   -2.9435 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1286   -0.4407   -1.3864 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5709   -0.3305   -0.7952 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1221    0.0467    1.0439 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9052    1.5285    0.7065 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5012    2.1037    1.0222 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9859    2.4967   -0.6256 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1775    1.3855   -0.6757 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9242    0.4137   -1.5804 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6526   -1.0367    0.3825 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3735   -0.9671   -0.2390 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1424   -0.8721    2.2958 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2152    0.6286    2.1793 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6090    1.1793    2.5912 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9455    1.8675    1.0967 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1689   -0.0175   -0.1940 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2097    0.9404    0.8841 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1448   -0.7364    2.6331 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8558   -1.7127    1.7613 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5321   -2.0081   -0.1164 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0868   -2.6371    1.5112 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4421   -0.5729    1.8581 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8744    0.1057    0.2536 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0199   -0.9116    0.1226 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3560   -2.4459    0.8058 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1902   -2.9651   -1.1703 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8409   -1.2337   -1.5379 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.4667   -1.8761   -1.9354 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.4762   -2.2487    1.6324 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.0168   -2.2354    0.0918 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  3  4  1  0
  4  5  2  0
  4  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
  6 27  1  0
 27 28  1  0
 27  2  1  0
  1 29  1  0
  1 30  1  0
  7 31  1  0
  8 32  1  0
  8 33  1  0
  9 34  1  0
  9 35  1  0
 10 36  1  0
 10 37  1  0
 11 38  1  0
 11 39  1  0
 12 40  1  0
 12 41  1  0
 13 42  1  0
 13 43  1  0
 14 44  1  0
 14 45  1  0
 15 46  1  0
 15 47  1  0
 16 48  1  0
 16 49  1  0
 17 50  1  0
 17 51  1  0
 18 52  1  0
 18 53  1  0
 19 54  1  0
 19 55  1  0
 20 56  1  0
 20 57  1  0
 21 58  1  0
 21 59  1  0
 22 60  1  0
 22 61  1  0
 23 62  1  0
 23 63  1  0
 24 64  1  0
 24 65  1  0
 25 66  1  0
 25 67  1  0
 26 68  1  0
 26 69  1  0
 26 70  1  0
 27 71  1  1
 28 72  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0      10.050   0.443   1.830  0.00  0.00           C+0
HETATM    2  C   UNK     0       8.905  -0.194   1.756  0.00  0.00           C+0
HETATM    3  O   UNK     0       7.729   0.129   2.448  0.00  0.00           O+0
HETATM    4  C   UNK     0       6.611  -0.325   1.717  0.00  0.00           C+0
HETATM    5  O   UNK     0       5.400  -0.208   2.037  0.00  0.00           O+0
HETATM    6  C   UNK     0       7.150  -0.958   0.517  0.00  0.00           C+0
HETATM    7  C   UNK     0       6.561  -1.080  -0.629  0.00  0.00           C+0
HETATM    8  C   UNK     0       5.214  -0.572  -0.879  0.00  0.00           C+0
HETATM    9  C   UNK     0       5.248   0.464  -1.982  0.00  0.00           C+0
HETATM   10  C   UNK     0       3.923   1.041  -2.312  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.282   1.728  -1.159  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.941   2.333  -1.504  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.928   1.356  -1.990  0.00  0.00           C+0
HETATM   14  C   UNK     0       0.631   0.279  -0.980  0.00  0.00           C+0
HETATM   15  C   UNK     0       0.112   0.847   0.288  0.00  0.00           C+0
HETATM   16  C   UNK     0      -1.148   1.622   0.059  0.00  0.00           C+0
HETATM   17  C   UNK     0      -2.224   0.784  -0.554  0.00  0.00           C+0
HETATM   18  C   UNK     0      -2.561  -0.398   0.294  0.00  0.00           C+0
HETATM   19  C   UNK     0      -3.010   0.037   1.657  0.00  0.00           C+0
HETATM   20  C   UNK     0      -4.213   0.907   1.562  0.00  0.00           C+0
HETATM   21  C   UNK     0      -5.351   0.208   0.869  0.00  0.00           C+0
HETATM   22  C   UNK     0      -5.724  -1.031   1.626  0.00  0.00           C+0
HETATM   23  C   UNK     0      -6.859  -1.723   0.916  0.00  0.00           C+0
HETATM   24  C   UNK     0      -8.048  -0.791   0.863  0.00  0.00           C+0
HETATM   25  C   UNK     0      -9.151  -1.596   0.146  0.00  0.00           C+0
HETATM   26  C   UNK     0      -8.623  -1.946  -1.214  0.00  0.00           C+0
HETATM   27  C   UNK     0       8.519  -1.404   0.947  0.00  0.00           C+0
HETATM   28  O   UNK     0       9.328  -1.540  -0.149  0.00  0.00           O+0
HETATM   29  H   UNK     0      10.184   1.320   2.470  0.00  0.00           H+0
HETATM   30  H   UNK     0      10.925   0.150   1.278  0.00  0.00           H+0
HETATM   31  H   UNK     0       7.112  -1.587  -1.435  0.00  0.00           H+0
HETATM   32  H   UNK     0       4.647  -0.193  -0.053  0.00  0.00           H+0
HETATM   33  H   UNK     0       4.643  -1.442  -1.336  0.00  0.00           H+0
HETATM   34  H   UNK     0       5.583  -0.114  -2.896  0.00  0.00           H+0
HETATM   35  H   UNK     0       6.023   1.223  -1.816  0.00  0.00           H+0
HETATM   36  H   UNK     0       4.082   1.811  -3.107  0.00  0.00           H+0
HETATM   37  H   UNK     0       3.241   0.236  -2.657  0.00  0.00           H+0
HETATM   38  H   UNK     0       3.093   1.032  -0.303  0.00  0.00           H+0
HETATM   39  H   UNK     0       3.953   2.533  -0.794  0.00  0.00           H+0
HETATM   40  H   UNK     0       1.518   2.896  -0.650  0.00  0.00           H+0
HETATM   41  H   UNK     0       2.121   3.119  -2.296  0.00  0.00           H+0
HETATM   42  H   UNK     0       0.017   1.930  -2.260  0.00  0.00           H+0
HETATM   43  H   UNK     0       1.234   0.854  -2.943  0.00  0.00           H+0
HETATM   44  H   UNK     0      -0.129  -0.441  -1.386  0.00  0.00           H+0
HETATM   45  H   UNK     0       1.571  -0.331  -0.795  0.00  0.00           H+0
HETATM   46  H   UNK     0      -0.122   0.047   1.044  0.00  0.00           H+0
HETATM   47  H   UNK     0       0.905   1.529   0.707  0.00  0.00           H+0
HETATM   48  H   UNK     0      -1.501   2.104   1.022  0.00  0.00           H+0
HETATM   49  H   UNK     0      -0.986   2.497  -0.626  0.00  0.00           H+0
HETATM   50  H   UNK     0      -3.178   1.385  -0.676  0.00  0.00           H+0
HETATM   51  H   UNK     0      -1.924   0.414  -1.580  0.00  0.00           H+0
HETATM   52  H   UNK     0      -1.653  -1.037   0.383  0.00  0.00           H+0
HETATM   53  H   UNK     0      -3.373  -0.967  -0.239  0.00  0.00           H+0
HETATM   54  H   UNK     0      -3.142  -0.872   2.296  0.00  0.00           H+0
HETATM   55  H   UNK     0      -2.215   0.629   2.179  0.00  0.00           H+0
HETATM   56  H   UNK     0      -4.609   1.179   2.591  0.00  0.00           H+0
HETATM   57  H   UNK     0      -3.946   1.867   1.097  0.00  0.00           H+0
HETATM   58  H   UNK     0      -5.169  -0.018  -0.194  0.00  0.00           H+0
HETATM   59  H   UNK     0      -6.210   0.940   0.884  0.00  0.00           H+0
HETATM   60  H   UNK     0      -6.145  -0.736   2.633  0.00  0.00           H+0
HETATM   61  H   UNK     0      -4.856  -1.713   1.761  0.00  0.00           H+0
HETATM   62  H   UNK     0      -6.532  -2.008  -0.116  0.00  0.00           H+0
HETATM   63  H   UNK     0      -7.087  -2.637   1.511  0.00  0.00           H+0
HETATM   64  H   UNK     0      -8.442  -0.573   1.858  0.00  0.00           H+0
HETATM   65  H   UNK     0      -7.874   0.106   0.254  0.00  0.00           H+0
HETATM   66  H   UNK     0     -10.020  -0.912   0.123  0.00  0.00           H+0
HETATM   67  H   UNK     0      -9.356  -2.446   0.806  0.00  0.00           H+0
HETATM   68  H   UNK     0      -8.190  -2.965  -1.170  0.00  0.00           H+0
HETATM   69  H   UNK     0      -7.841  -1.234  -1.538  0.00  0.00           H+0
HETATM   70  H   UNK     0      -9.467  -1.876  -1.935  0.00  0.00           H+0
HETATM   71  H   UNK     0       8.476  -2.249   1.632  0.00  0.00           H+0
HETATM   72  H   UNK     0      10.017  -2.235   0.092  0.00  0.00           H+0
CONECT    1    2   29   30                                                  
CONECT    2    1    3   27                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7   27                                                  
CONECT    7    6    8   31                                                  
CONECT    8    7    9   32   33                                             
CONECT    9    8   10   34   35                                             
CONECT   10    9   11   36   37                                             
CONECT   11   10   12   38   39                                             
CONECT   12   11   13   40   41                                             
CONECT   13   12   14   42   43                                             
CONECT   14   13   15   44   45                                             
CONECT   15   14   16   46   47                                             
CONECT   16   15   17   48   49                                             
CONECT   17   16   18   50   51                                             
CONECT   18   17   19   52   53                                             
CONECT   19   18   20   54   55                                             
CONECT   20   19   21   56   57                                             
CONECT   21   20   22   58   59                                             
CONECT   22   21   23   60   61                                             
CONECT   23   22   24   62   63                                             
CONECT   24   23   25   64   65                                             
CONECT   25   24   26   66   67                                             
CONECT   26   25   68   69   70                                             
CONECT   27    6   28    2   71                                             
CONECT   28   27   72                                                       
CONECT   29    1                                                            
CONECT   30    1                                                            
CONECT   31    7                                                            
CONECT   32    8                                                            
CONECT   33    8                                                            
CONECT   34    9                                                            
CONECT   35    9                                                            
CONECT   36   10                                                            
CONECT   37   10                                                            
CONECT   38   11                                                            
CONECT   39   11                                                            
CONECT   40   12                                                            
CONECT   41   12                                                            
CONECT   42   13                                                            
CONECT   43   13                                                            
CONECT   44   14                                                            
CONECT   45   14                                                            
CONECT   46   15                                                            
CONECT   47   15                                                            
CONECT   48   16                                                            
CONECT   49   16                                                            
CONECT   50   17                                                            
CONECT   51   17                                                            
CONECT   52   18                                                            
CONECT   53   18                                                            
CONECT   54   19                                                            
CONECT   55   19                                                            
CONECT   56   20                                                            
CONECT   57   20                                                            
CONECT   58   21                                                            
CONECT   59   21                                                            
CONECT   60   22                                                            
CONECT   61   22                                                            
CONECT   62   23                                                            
CONECT   63   23                                                            
CONECT   64   24                                                            
CONECT   65   24                                                            
CONECT   66   25                                                            
CONECT   67   25                                                            
CONECT   68   26                                                            
CONECT   69   26                                                            
CONECT   70   26                                                            
CONECT   71   27                                                            
CONECT   72   28                                                            
MASTER        0    0    0    0    0    0    0    0   72    0  144    0
END

RDKit          3D

72 72  0  0  0  0  0  0  0  0999 V2000
   10.0503    0.4429    1.8304 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9046   -0.1944    1.7560 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7290    0.1292    2.4480 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6107   -0.3252    1.7172 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4002   -0.2084    2.0371 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1504   -0.9584    0.5167 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5613   -1.0797   -0.6288 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2144   -0.5721   -0.8792 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2477    0.4643   -1.9824 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9231    1.0410   -2.3120 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2824    1.7283   -1.1587 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9411    2.3332   -1.5041 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9277    1.3560   -1.9899 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6309    0.2785   -0.9799 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1115    0.8473    0.2883 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1478    1.6217    0.0591 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2238    0.7841   -0.5543 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5612   -0.3983    0.2936 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0105    0.0365    1.6565 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2134    0.9069    1.5623 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3507    0.2082    0.8689 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7236   -1.0309    1.6264 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8590   -1.7229    0.9161 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0478   -0.7910    0.8634 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.1510   -1.5963    0.1464 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6228   -1.9461   -1.2135 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5194   -1.4038    0.9473 C   0  0  1  0  0  0  0  0  0  0  0  0
    9.3276   -1.5396   -0.1493 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.1840    1.3202    2.4695 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.9246    0.1497    1.2779 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1123   -1.5871   -1.4348 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6466   -0.1926   -0.0525 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6432   -1.4424   -1.3361 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5834   -0.1142   -2.8964 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0234    1.2226   -1.8156 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0819    1.8113   -3.1071 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2412    0.2358   -2.6568 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0934    1.0320   -0.3027 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9527    2.5332   -0.7935 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5178    2.8955   -0.6503 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1213    3.1190   -2.2959 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0171    1.9300   -2.2595 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2336    0.8544   -2.9435 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1286   -0.4407   -1.3864 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5709   -0.3305   -0.7952 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1221    0.0467    1.0439 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9052    1.5285    0.7065 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5012    2.1037    1.0222 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9859    2.4967   -0.6256 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1775    1.3855   -0.6757 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9242    0.4137   -1.5804 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6526   -1.0367    0.3825 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3735   -0.9671   -0.2390 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1424   -0.8721    2.2958 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2152    0.6286    2.1793 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6090    1.1793    2.5912 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9455    1.8675    1.0967 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1689   -0.0175   -0.1940 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2097    0.9404    0.8841 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1448   -0.7364    2.6331 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8558   -1.7127    1.7613 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5321   -2.0081   -0.1164 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0868   -2.6371    1.5112 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4421   -0.5729    1.8581 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8744    0.1057    0.2536 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0199   -0.9116    0.1226 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3560   -2.4459    0.8058 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1902   -2.9651   -1.1703 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8409   -1.2337   -1.5379 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.4667   -1.8761   -1.9354 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.4762   -2.2487    1.6324 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.0168   -2.2354    0.0918 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  3  4  1  0
  4  5  2  0
  4  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
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M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
Dihydro-4-hydroxy-3-icosylidene-5-methylidenefuran-2(3H)-one	MeSH

Chemical Formula

C₂₅H₄₄O₃

Average Mass

392.6240 Da

Monoisotopic Mass

392.32905 Da

IUPAC Name

(3Z,4R)-4-hydroxy-3-icosylidene-5-methylideneoxolan-2-one

Traditional Name

(3Z,4R)-4-hydroxy-3-icosylidene-5-methylideneoxolan-2-one

CAS Registry Number

Not Available

SMILES

CCCCCCCCCCCCCCCCCCC\C=C1\[C@@H](O)C(=C)OC1=O

InChI Identifier

InChI=1S/C25H44O3/c1-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-23-24(26)22(2)28-25(23)27/h21,24,26H,2-20H2,1H3/b23-21-/t24-/m0/s1

InChI Key

VJDSJBHPTKUESZ-WEPATYSUSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Actinomadura	NPAtlas	23418178
Actinomadura miaoliensis	LOTUS Database	35616633

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	8.99	ALOGPS
logP	8.52	ChemAxon
logS	-6.9	ALOGPS
pKa (Strongest Acidic)	11.38	ChemAxon
pKa (Strongest Basic)	-3.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	46.53 Å²	ChemAxon
Rotatable Bond Count	18	ChemAxon
Refractivity	119.15 m³·mol⁻¹	ChemAxon
Polarizability	49.44 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA004290

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78440855

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

71600064

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Tseng M, Su YS, Cheng MJ, Liu TW, Chen IS, Wu MD, Chang HS, Yuan GF: Chemical constituents from a soil-derived actinomycete, Actinomadura miaoliensis BCRC 16873, and their inhibitory activities on lipopolysaccharide-induced tumor necrosis factor production. Chem Biodivers. 2013 Feb;10(2):303-12. doi: 10.1002/cbdv.201200242. [PubMed:23418178 ]

Showing NP-Card for Miaolinolide (NP0011510)

MOL for NP0011510 (Miaolinolide)

3D MOL for NP0011510 (Miaolinolide)

3D SDF for NP0011510 (Miaolinolide)

3D-SDF for NP0011510 (Miaolinolide)

PDB for NP0011510 (Miaolinolide)

3D PDB for NP0011510 (Miaolinolide)

SMILES for NP0011510 (Miaolinolide)

INCHI for NP0011510 (Miaolinolide)

Structure for NP0011510 (Miaolinolide)

3D Structure for NP0011510 (Miaolinolide)