NP-MRD: Showing NP-Card for Stereumin M (NP0011287)

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Record Information

Version

1.0

Created at

2021-01-05 21:01:54 UTC

Updated at

2021-07-15 17:08:29 UTC

NP-MRD ID

NP0011287

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Stereumin M

Provided By

NPAtlas

Description

Stereumin M belongs to the class of organic compounds known as oxanes. Oxanes are compounds containing an oxane (tetrahydropyran) ring, which is a six-member saturated aliphatic heterocycle with one oxygen atom and five carbon atoms. Stereumin M is found in Stereum. It was first documented in 2013 (PMID: 23177358). Based on a literature review very few articles have been published on Stereumin M.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242116553D          

 39 41  0  0  0  0            999 V2000
   -1.4091    3.4437    0.2130 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3086    2.1234    0.1937 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4794    1.3308   -0.2285 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.0259    0.0954   -0.6701 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4296   -0.5122    0.4341 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.5077   -1.9839    0.2662 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7824   -2.3086   -0.5237 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3319   -2.6054   -0.3991 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4164   -3.4613   -1.2541 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0075   -2.0881    0.0714 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9802   -0.6118   -0.2573 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3343   -0.0409    0.0978 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.4653   -0.8129   -0.5459 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3985    1.4118   -0.3325 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.0451    2.0264   -0.2769 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8224    2.9873   -0.9768 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0366    1.5109    0.5977 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2477    2.0533    1.8800 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0388    0.0138    0.6771 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5771    4.0883    0.5166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3386    3.9191   -0.0782 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1625    1.2013    0.6628 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0654    1.8664   -1.0151 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0386   -0.2306    1.3200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6220   -2.5173    1.2468 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6149   -2.1658    0.2226 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7592   -3.3533   -0.8906 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8776   -1.5753   -1.3490 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7907   -2.6315   -0.4864 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0458   -2.1984    1.1528 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7175   -0.4344   -1.3241 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4518   -0.0908    1.1860 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6030   -1.7962   -0.0555 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3931   -0.2381   -0.3706 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2670   -0.9076   -1.6355 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8283    1.4857   -1.3356 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0405    1.9484    0.3889 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1329    1.3382    2.5414 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2508   -0.2798    1.7009 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  8  9  2  0  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 15 17  1  0  0  0  0
 17 18  1  1  0  0  0
 17 19  1  0  0  0  0
 17  2  1  0  0  0  0
 19  5  1  0  0  0  0
 19 11  1  0  0  0  0
  1 20  1  0  0  0  0
  1 21  1  0  0  0  0
  3 22  1  0  0  0  0
  3 23  1  0  0  0  0
  5 24  1  1  0  0  0
  6 25  1  1  0  0  0
  7 26  1  0  0  0  0
  7 27  1  0  0  0  0
  7 28  1  0  0  0  0
 10 29  1  0  0  0  0
 10 30  1  0  0  0  0
 11 31  1  6  0  0  0
 12 32  1  1  0  0  0
 13 33  1  0  0  0  0
 13 34  1  0  0  0  0
 13 35  1  0  0  0  0
 14 36  1  0  0  0  0
 14 37  1  0  0  0  0
 18 38  1  0  0  0  0
 19 39  1  1  0  0  0
M  END

     RDKit          3D

 39 41  0  0  0  0  0  0  0  0999 V2000
   -1.4091    3.4437    0.2130 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3086    2.1234    0.1937 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4794    1.3308   -0.2285 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0259    0.0954   -0.6701 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4296   -0.5122    0.4341 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.5077   -1.9839    0.2662 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7824   -2.3086   -0.5237 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3319   -2.6054   -0.3991 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4164   -3.4613   -1.2541 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0075   -2.0881    0.0714 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9802   -0.6118   -0.2573 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3343   -0.0409    0.0978 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.4653   -0.8129   -0.5459 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3985    1.4118   -0.3325 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0451    2.0264   -0.2769 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8224    2.9873   -0.9768 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0366    1.5109    0.5977 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2477    2.0533    1.8800 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0388    0.0138    0.6771 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5771    4.0883    0.5166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3386    3.9191   -0.0782 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1625    1.2013    0.6628 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0654    1.8664   -1.0151 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0386   -0.2306    1.3200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6220   -2.5173    1.2468 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6149   -2.1658    0.2226 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7592   -3.3533   -0.8906 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8776   -1.5753   -1.3490 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7907   -2.6315   -0.4864 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0458   -2.1984    1.1528 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7175   -0.4344   -1.3241 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4518   -0.0908    1.1860 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6030   -1.7962   -0.0555 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3931   -0.2381   -0.3706 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2670   -0.9076   -1.6355 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8283    1.4857   -1.3356 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0405    1.9484    0.3889 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1329    1.3382    2.5414 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2508   -0.2798    1.7009 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  6  8  1  0
  8  9  2  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 15 16  2  0
 15 17  1  0
 17 18  1  1
 17 19  1  0
 17  2  1  0
 19  5  1  0
 19 11  1  0
  1 20  1  0
  1 21  1  0
  3 22  1  0
  3 23  1  0
  5 24  1  1
  6 25  1  1
  7 26  1  0
  7 27  1  0
  7 28  1  0
 10 29  1  0
 10 30  1  0
 11 31  1  6
 12 32  1  1
 13 33  1  0
 13 34  1  0
 13 35  1  0
 14 36  1  0
 14 37  1  0
 18 38  1  0
 19 39  1  1
M  END


  Mrv1652306242116553D          

 39 41  0  0  0  0            999 V2000
   -1.4091    3.4437    0.2130 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3086    2.1234    0.1937 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4794    1.3308   -0.2285 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.0259    0.0954   -0.6701 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4296   -0.5122    0.4341 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.5077   -1.9839    0.2662 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7824   -2.3086   -0.5237 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3319   -2.6054   -0.3991 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4164   -3.4613   -1.2541 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0075   -2.0881    0.0714 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9802   -0.6118   -0.2573 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3343   -0.0409    0.0978 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.4653   -0.8129   -0.5459 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3985    1.4118   -0.3325 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.0451    2.0264   -0.2769 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8224    2.9873   -0.9768 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0366    1.5109    0.5977 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2477    2.0533    1.8800 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0388    0.0138    0.6771 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5771    4.0883    0.5166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3386    3.9191   -0.0782 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1625    1.2013    0.6628 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0654    1.8664   -1.0151 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0386   -0.2306    1.3200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6220   -2.5173    1.2468 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6149   -2.1658    0.2226 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7592   -3.3533   -0.8906 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8776   -1.5753   -1.3490 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7907   -2.6315   -0.4864 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0458   -2.1984    1.1528 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7175   -0.4344   -1.3241 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4518   -0.0908    1.1860 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6030   -1.7962   -0.0555 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3931   -0.2381   -0.3706 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2670   -0.9076   -1.6355 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8283    1.4857   -1.3356 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0405    1.9484    0.3889 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1329    1.3382    2.5414 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2508   -0.2798    1.7009 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  8  9  2  0  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 15 17  1  0  0  0  0
 17 18  1  1  0  0  0
 17 19  1  0  0  0  0
 17  2  1  0  0  0  0
 19  5  1  0  0  0  0
 19 11  1  0  0  0  0
  1 20  1  0  0  0  0
  1 21  1  0  0  0  0
  3 22  1  0  0  0  0
  3 23  1  0  0  0  0
  5 24  1  1  0  0  0
  6 25  1  1  0  0  0
  7 26  1  0  0  0  0
  7 27  1  0  0  0  0
  7 28  1  0  0  0  0
 10 29  1  0  0  0  0
 10 30  1  0  0  0  0
 11 31  1  6  0  0  0
 12 32  1  1  0  0  0
 13 33  1  0  0  0  0
 13 34  1  0  0  0  0
 13 35  1  0  0  0  0
 14 36  1  0  0  0  0
 14 37  1  0  0  0  0
 18 38  1  0  0  0  0
 19 39  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0011287

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@]12C(=O)C([H])([H])[C@]([H])(C([H])([H])[H])[C@@]3([H])C([H])([H])C(=O)[C@]([H])(C([H])([H])[H])[C@]([H])(OC([H])([H])C1=C([H])[H])[C@]23[H]

> <INCHI_IDENTIFIER>
InChI=1S/C15H20O4/c1-7-4-12(17)15(18)8(2)6-19-14-9(3)11(16)5-10(7)13(14)15/h7,9-10,13-14,18H,2,4-6H2,1,3H3/t7-,9-,10+,13+,14-,15-/m0/s1

> <INCHI_KEY>
WZCAALLBFMLHLR-HPKNGNGWSA-N

> <FORMULA>
C15H20O4

> <MOLECULAR_WEIGHT>
264.321

> <EXACT_MASS>
264.136159124

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
39

> <JCHEM_AVERAGE_POLARIZABILITY>
27.78460305716108

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,5S,8S,9R,12R,13R)-5-hydroxy-8,12-dimethyl-4-methylidene-2-oxatricyclo[7.3.1.0^{5,13}]tridecane-6,11-dione

> <ALOGPS_LOGP>
0.63

> <JCHEM_LOGP>
1.087566445333333

> <ALOGPS_LOGS>
-1.55

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
18.26960347030028

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.197159874375796

> <JCHEM_PKA_STRONGEST_BASIC>
-4.024761803002005

> <JCHEM_POLAR_SURFACE_AREA>
63.60000000000001

> <JCHEM_REFRACTIVITY>
69.01480000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
7.54e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,5S,8S,9R,12R,13R)-5-hydroxy-8,12-dimethyl-4-methylidene-2-oxatricyclo[7.3.1.0^{5,13}]tridecane-6,11-dione

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 39 41  0  0  0  0  0  0  0  0999 V2000
   -1.4091    3.4437    0.2130 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3086    2.1234    0.1937 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4794    1.3308   -0.2285 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0259    0.0954   -0.6701 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4296   -0.5122    0.4341 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.5077   -1.9839    0.2662 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7824   -2.3086   -0.5237 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3319   -2.6054   -0.3991 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4164   -3.4613   -1.2541 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0075   -2.0881    0.0714 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9802   -0.6118   -0.2573 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3343   -0.0409    0.0978 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.4653   -0.8129   -0.5459 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3985    1.4118   -0.3325 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0451    2.0264   -0.2769 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8224    2.9873   -0.9768 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0366    1.5109    0.5977 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2477    2.0533    1.8800 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0388    0.0138    0.6771 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5771    4.0883    0.5166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3386    3.9191   -0.0782 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1625    1.2013    0.6628 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0654    1.8664   -1.0151 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0386   -0.2306    1.3200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6220   -2.5173    1.2468 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6149   -2.1658    0.2226 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7592   -3.3533   -0.8906 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8776   -1.5753   -1.3490 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7907   -2.6315   -0.4864 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0458   -2.1984    1.1528 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7175   -0.4344   -1.3241 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4518   -0.0908    1.1860 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6030   -1.7962   -0.0555 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3931   -0.2381   -0.3706 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2670   -0.9076   -1.6355 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8283    1.4857   -1.3356 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0405    1.9484    0.3889 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1329    1.3382    2.5414 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2508   -0.2798    1.7009 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  6  8  1  0
  8  9  2  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 15 16  2  0
 15 17  1  0
 17 18  1  1
 17 19  1  0
 17  2  1  0
 19  5  1  0
 19 11  1  0
  1 20  1  0
  1 21  1  0
  3 22  1  0
  3 23  1  0
  5 24  1  1
  6 25  1  1
  7 26  1  0
  7 27  1  0
  7 28  1  0
 10 29  1  0
 10 30  1  0
 11 31  1  6
 12 32  1  1
 13 33  1  0
 13 34  1  0
 13 35  1  0
 14 36  1  0
 14 37  1  0
 18 38  1  0
 19 39  1  1
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0      -1.409   3.444   0.213  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.309   2.123   0.194  0.00  0.00           C+0
HETATM    3  C   UNK     0      -2.479   1.331  -0.229  0.00  0.00           C+0
HETATM    4  O   UNK     0      -2.026   0.095  -0.670  0.00  0.00           O+0
HETATM    5  C   UNK     0      -1.430  -0.512   0.434  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.508  -1.984   0.266  0.00  0.00           C+0
HETATM    7  C   UNK     0      -2.782  -2.309  -0.524  0.00  0.00           C+0
HETATM    8  C   UNK     0      -0.332  -2.605  -0.399  0.00  0.00           C+0
HETATM    9  O   UNK     0      -0.416  -3.461  -1.254  0.00  0.00           O+0
HETATM   10  C   UNK     0       1.008  -2.088   0.071  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.980  -0.612  -0.257  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.334  -0.041   0.098  0.00  0.00           C+0
HETATM   13  C   UNK     0       3.465  -0.813  -0.546  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.398   1.412  -0.333  0.00  0.00           C+0
HETATM   15  C   UNK     0       1.045   2.026  -0.277  0.00  0.00           C+0
HETATM   16  O   UNK     0       0.822   2.987  -0.977  0.00  0.00           O+0
HETATM   17  C   UNK     0      -0.037   1.511   0.598  0.00  0.00           C+0
HETATM   18  O   UNK     0       0.248   2.053   1.880  0.00  0.00           O+0
HETATM   19  C   UNK     0      -0.039   0.014   0.677  0.00  0.00           C+0
HETATM   20  H   UNK     0      -0.577   4.088   0.517  0.00  0.00           H+0
HETATM   21  H   UNK     0      -2.339   3.919  -0.078  0.00  0.00           H+0
HETATM   22  H   UNK     0      -3.163   1.201   0.663  0.00  0.00           H+0
HETATM   23  H   UNK     0      -3.065   1.866  -1.015  0.00  0.00           H+0
HETATM   24  H   UNK     0      -2.039  -0.231   1.320  0.00  0.00           H+0
HETATM   25  H   UNK     0      -1.622  -2.517   1.247  0.00  0.00           H+0
HETATM   26  H   UNK     0      -3.615  -2.166   0.223  0.00  0.00           H+0
HETATM   27  H   UNK     0      -2.759  -3.353  -0.891  0.00  0.00           H+0
HETATM   28  H   UNK     0      -2.878  -1.575  -1.349  0.00  0.00           H+0
HETATM   29  H   UNK     0       1.791  -2.632  -0.486  0.00  0.00           H+0
HETATM   30  H   UNK     0       1.046  -2.198   1.153  0.00  0.00           H+0
HETATM   31  H   UNK     0       0.718  -0.434  -1.324  0.00  0.00           H+0
HETATM   32  H   UNK     0       2.452  -0.091   1.186  0.00  0.00           H+0
HETATM   33  H   UNK     0       3.603  -1.796  -0.056  0.00  0.00           H+0
HETATM   34  H   UNK     0       4.393  -0.238  -0.371  0.00  0.00           H+0
HETATM   35  H   UNK     0       3.267  -0.908  -1.636  0.00  0.00           H+0
HETATM   36  H   UNK     0       2.828   1.486  -1.336  0.00  0.00           H+0
HETATM   37  H   UNK     0       3.041   1.948   0.389  0.00  0.00           H+0
HETATM   38  H   UNK     0       0.133   1.338   2.541  0.00  0.00           H+0
HETATM   39  H   UNK     0       0.251  -0.280   1.701  0.00  0.00           H+0
CONECT    1    2   20   21                                                  
CONECT    2    1    3   17                                                  
CONECT    3    2    4   22   23                                             
CONECT    4    3    5                                                       
CONECT    5    4    6   19   24                                             
CONECT    6    5    7    8   25                                             
CONECT    7    6   26   27   28                                             
CONECT    8    6    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8   11   29   30                                             
CONECT   11   10   12   19   31                                             
CONECT   12   11   13   14   32                                             
CONECT   13   12   33   34   35                                             
CONECT   14   12   15   36   37                                             
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   18   19    2                                             
CONECT   18   17   38                                                       
CONECT   19   17    5   11   39                                             
CONECT   20    1                                                            
CONECT   21    1                                                            
CONECT   22    3                                                            
CONECT   23    3                                                            
CONECT   24    5                                                            
CONECT   25    6                                                            
CONECT   26    7                                                            
CONECT   27    7                                                            
CONECT   28    7                                                            
CONECT   29   10                                                            
CONECT   30   10                                                            
CONECT   31   11                                                            
CONECT   32   12                                                            
CONECT   33   13                                                            
CONECT   34   13                                                            
CONECT   35   13                                                            
CONECT   36   14                                                            
CONECT   37   14                                                            
CONECT   38   18                                                            
CONECT   39   19                                                            
MASTER        0    0    0    0    0    0    0    0   39    0   82    0
END

RDKit          3D

39 41  0  0  0  0  0  0  0  0999 V2000
   -1.4091    3.4437    0.2130 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3086    2.1234    0.1937 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4794    1.3308   -0.2285 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0259    0.0954   -0.6701 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4296   -0.5122    0.4341 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.5077   -1.9839    0.2662 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7824   -2.3086   -0.5237 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3319   -2.6054   -0.3991 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4164   -3.4613   -1.2541 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0075   -2.0881    0.0714 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9802   -0.6118   -0.2573 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3343   -0.0409    0.0978 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.4653   -0.8129   -0.5459 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3985    1.4118   -0.3325 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0451    2.0264   -0.2769 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8224    2.9873   -0.9768 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0366    1.5109    0.5977 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2477    2.0533    1.8800 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0388    0.0138    0.6771 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5771    4.0883    0.5166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3386    3.9191   -0.0782 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1625    1.2013    0.6628 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0654    1.8664   -1.0151 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0386   -0.2306    1.3200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6220   -2.5173    1.2468 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6149   -2.1658    0.2226 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7592   -3.3533   -0.8906 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8776   -1.5753   -1.3490 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7907   -2.6315   -0.4864 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0458   -2.1984    1.1528 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7175   -0.4344   -1.3241 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4518   -0.0908    1.1860 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6030   -1.7962   -0.0555 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3931   -0.2381   -0.3706 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2670   -0.9076   -1.6355 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8283    1.4857   -1.3356 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0405    1.9484    0.3889 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1329    1.3382    2.5414 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2508   -0.2798    1.7009 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  6  8  1  0
  8  9  2  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 15 16  2  0
 15 17  1  0
 17 18  1  1
 17 19  1  0
 17  2  1  0
 19  5  1  0
 19 11  1  0
  1 20  1  0
  1 21  1  0
  3 22  1  0
  3 23  1  0
  5 24  1  1
  6 25  1  1
  7 26  1  0
  7 27  1  0
  7 28  1  0
 10 29  1  0
 10 30  1  0
 11 31  1  6
 12 32  1  1
 13 33  1  0
 13 34  1  0
 13 35  1  0
 14 36  1  0
 14 37  1  0
 18 38  1  0
 19 39  1  1
M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₁₅H₂₀O₄

Average Mass

264.3210 Da

Monoisotopic Mass

264.13616 Da

IUPAC Name

(1R,5S,8S,9R,12R,13R)-5-hydroxy-8,12-dimethyl-4-methylidene-2-oxatricyclo[7.3.1.0^{5,13}]tridecane-6,11-dione

Traditional Name

(1R,5S,8S,9R,12R,13R)-5-hydroxy-8,12-dimethyl-4-methylidene-2-oxatricyclo[7.3.1.0^{5,13}]tridecane-6,11-dione

CAS Registry Number

Not Available

SMILES

C[C@H]1CC(=O)[C@]2(O)[C@@H]3[C@@H]1CC(=O)[C@H](C)[C@@H]3OCC2=C

InChI Identifier

InChI=1S/C15H20O4/c1-7-4-12(17)15(18)8(2)6-19-14-9(3)11(16)5-10(7)13(14)15/h7,9-10,13-14,18H,2,4-6H2,1,3H3/t7-,9-,10+,13+,14-,15-/m0/s1

InChI Key

WZCAALLBFMLHLR-HPKNGNGWSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Stereum	NPAtlas	23177358

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as oxanes. Oxanes are compounds containing an oxane (tetrahydropyran) ring, which is a six-member saturated aliphatic heterocycle with one oxygen atom and five carbon atoms.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Oxanes

Sub Class

Not Available

Direct Parent

Oxanes

Alternative Parents

Substituents

Oxane
Tertiary alcohol
Cyclic alcohol
Cyclic ketone
Ketone
Oxacycle
Ether
Dialkyl ether
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Alcohol
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.63	ALOGPS
logP	1.09	ChemAxon
logS	-1.6	ALOGPS
pKa (Strongest Acidic)	12.2	ChemAxon
pKa (Strongest Basic)	-4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	63.6 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	69.01 m³·mol⁻¹	ChemAxon
Polarizability	27.78 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA017107

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78443485

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139587857

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Zheng X, Li GH, Xie MJ, Wang X, Sun R, Lu H, Zhang KQ: Stereumins K-P, sesquiterpenes from the fungus Stereum sp. CCTCC AF 2012007. Phytochemistry. 2013 Feb;86:144-50. doi: 10.1016/j.phytochem.2012.10.014. Epub 2012 Nov 21. [PubMed:23177358 ]

Showing NP-Card for Stereumin M (NP0011287)

MOL for NP0011287 (Stereumin M)

3D MOL for NP0011287 (Stereumin M)

3D SDF for NP0011287 (Stereumin M)

3D-SDF for NP0011287 (Stereumin M)

PDB for NP0011287 (Stereumin M)

3D PDB for NP0011287 (Stereumin M)

SMILES for NP0011287 (Stereumin M)

INCHI for NP0011287 (Stereumin M)

Structure for NP0011287 (Stereumin M)

3D Structure for NP0011287 (Stereumin M)