NP-MRD: Showing NP-Card for Agathic acid (NP0011266)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

1.0

Created at

2021-01-05 21:01:07 UTC

Updated at

2021-07-15 17:08:26 UTC

NP-MRD ID

NP0011266

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Agathic acid

Provided By

NPAtlas

Description

CHEMBL4285668 is also known as agathic acid. Agathic acid is found in Agathis australis , Chromocleista sp., Hymenaea oblongifolia and Unknown-fungus platensis MA7339. It was first documented in 2012 (PMID: 23157615). Based on a literature review very few articles have been published on CHEMBL4285668.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242116553D          

 54 55  0  0  0  0            999 V2000
    1.6436    0.7142   -2.1760 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8664    0.5703   -1.0865 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5011    1.7780   -0.2986 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9000    1.6819    0.2628 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.5656    0.4697   -0.3661 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.8601   -0.8058    0.0332 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6195   -0.8953    1.5062 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6943   -2.0058   -0.3379 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.6797   -1.7075   -1.4386 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.6238   -0.6080   -1.1036 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.0396    0.4768   -0.2274 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5120    1.8397   -0.7812 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5713    0.4032    1.1346 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2575   -0.5758    1.5191 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3371    1.4144    2.0554 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4263   -0.8020   -0.7937 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.4298   -1.8111   -0.4639 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3281   -1.6868    0.6866 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.2473   -0.5226    0.7017 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2574   -0.3612   -0.3596 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2128    0.3868    1.6673 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0782    1.5428    1.7439 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9310    2.3380    2.7315 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0670    1.8535    0.8134 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9568   -0.0969   -2.8030 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9656    1.7009   -2.4269 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4778    2.6709   -0.9963 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2617    2.0545    0.4481 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5287    2.5564    0.0008 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8912    1.6201    1.3704 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3662    0.6042   -1.4744 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4338   -1.9543    1.7723 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1641   -0.2667    1.9110 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5602   -0.6377    2.0460 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2033   -2.4523    0.5450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0206   -2.7851   -0.7356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1094   -1.5370   -2.3843 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2684   -2.6365   -1.6019 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9272   -0.1356   -2.0653 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5889   -0.9871   -0.6673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5422    1.6534   -1.1519 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5595    2.5376    0.0750 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8515    2.1852   -1.5863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5334    1.3122    3.0428 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0031   -1.1561   -1.8250 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9527   -2.8434   -0.4705 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1246   -1.9115   -1.3796 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8933   -1.8405    1.6971 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0564   -2.5813    0.6198 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2065    0.5927   -0.9112 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2644   -1.2050   -1.0730 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2657   -0.3789    0.1400 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4763    0.2222    2.4326 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9932    2.0078    1.1790 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  1  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  1  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
  6 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 19 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 22 24  1  0  0  0  0
 16  2  1  0  0  0  0
 11  5  1  0  0  0  0
  1 25  1  0  0  0  0
  1 26  1  0  0  0  0
  3 27  1  0  0  0  0
  3 28  1  0  0  0  0
  4 29  1  0  0  0  0
  4 30  1  0  0  0  0
  5 31  1  6  0  0  0
  7 32  1  0  0  0  0
  7 33  1  0  0  0  0
  7 34  1  0  0  0  0
  8 35  1  0  0  0  0
  8 36  1  0  0  0  0
  9 37  1  0  0  0  0
  9 38  1  0  0  0  0
 10 39  1  0  0  0  0
 10 40  1  0  0  0  0
 12 41  1  0  0  0  0
 12 42  1  0  0  0  0
 12 43  1  0  0  0  0
 15 44  1  0  0  0  0
 16 45  1  6  0  0  0
 17 46  1  0  0  0  0
 17 47  1  0  0  0  0
 18 48  1  0  0  0  0
 18 49  1  0  0  0  0
 20 50  1  0  0  0  0
 20 51  1  0  0  0  0
 20 52  1  0  0  0  0
 21 53  1  0  0  0  0
 24 54  1  0  0  0  0
M  END

     RDKit          3D

 54 55  0  0  0  0  0  0  0  0999 V2000
    1.6436    0.7142   -2.1760 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8664    0.5703   -1.0865 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5011    1.7780   -0.2986 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9000    1.6819    0.2628 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5656    0.4697   -0.3661 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.8601   -0.8058    0.0332 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6195   -0.8953    1.5062 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6943   -2.0058   -0.3379 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6797   -1.7075   -1.4386 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6238   -0.6080   -1.1036 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0396    0.4768   -0.2274 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5120    1.8397   -0.7812 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5713    0.4032    1.1346 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2575   -0.5758    1.5191 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3371    1.4144    2.0554 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4263   -0.8020   -0.7937 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.4298   -1.8111   -0.4639 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3281   -1.6868    0.6866 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2473   -0.5226    0.7017 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2574   -0.3612   -0.3596 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2128    0.3868    1.6673 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0782    1.5428    1.7439 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9310    2.3380    2.7315 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0670    1.8535    0.8134 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9568   -0.0969   -2.8030 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9656    1.7009   -2.4269 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4778    2.6709   -0.9963 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2617    2.0545    0.4481 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5287    2.5564    0.0008 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8912    1.6201    1.3704 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3662    0.6042   -1.4744 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4338   -1.9543    1.7723 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1641   -0.2667    1.9110 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5602   -0.6377    2.0460 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2033   -2.4523    0.5450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0206   -2.7851   -0.7356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1094   -1.5370   -2.3843 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2684   -2.6365   -1.6019 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9272   -0.1356   -2.0653 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5889   -0.9871   -0.6673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5422    1.6534   -1.1519 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5595    2.5376    0.0750 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8515    2.1852   -1.5863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5334    1.3122    3.0428 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0031   -1.1561   -1.8250 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9527   -2.8434   -0.4705 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1246   -1.9115   -1.3796 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8933   -1.8405    1.6971 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0564   -2.5813    0.6198 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2065    0.5927   -0.9112 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2644   -1.2050   -1.0730 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2657   -0.3789    0.1400 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4763    0.2222    2.4326 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9932    2.0078    1.1790 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  1
  6  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 11 13  1  1
 13 14  2  0
 13 15  1  0
  6 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  2  0
 21 22  1  0
 22 23  2  0
 22 24  1  0
 16  2  1  0
 11  5  1  0
  1 25  1  0
  1 26  1  0
  3 27  1  0
  3 28  1  0
  4 29  1  0
  4 30  1  0
  5 31  1  6
  7 32  1  0
  7 33  1  0
  7 34  1  0
  8 35  1  0
  8 36  1  0
  9 37  1  0
  9 38  1  0
 10 39  1  0
 10 40  1  0
 12 41  1  0
 12 42  1  0
 12 43  1  0
 15 44  1  0
 16 45  1  6
 17 46  1  0
 17 47  1  0
 18 48  1  0
 18 49  1  0
 20 50  1  0
 20 51  1  0
 20 52  1  0
 21 53  1  0
 24 54  1  0
M  END


  Mrv1652306242116553D          

 54 55  0  0  0  0            999 V2000
    1.6436    0.7142   -2.1760 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8664    0.5703   -1.0865 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5011    1.7780   -0.2986 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9000    1.6819    0.2628 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.5656    0.4697   -0.3661 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.8601   -0.8058    0.0332 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6195   -0.8953    1.5062 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6943   -2.0058   -0.3379 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.6797   -1.7075   -1.4386 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.6238   -0.6080   -1.1036 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.0396    0.4768   -0.2274 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5120    1.8397   -0.7812 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5713    0.4032    1.1346 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2575   -0.5758    1.5191 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3371    1.4144    2.0554 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4263   -0.8020   -0.7937 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.4298   -1.8111   -0.4639 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3281   -1.6868    0.6866 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.2473   -0.5226    0.7017 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2574   -0.3612   -0.3596 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2128    0.3868    1.6673 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0782    1.5428    1.7439 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9310    2.3380    2.7315 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0670    1.8535    0.8134 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9568   -0.0969   -2.8030 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9656    1.7009   -2.4269 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4778    2.6709   -0.9963 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2617    2.0545    0.4481 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5287    2.5564    0.0008 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8912    1.6201    1.3704 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3662    0.6042   -1.4744 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4338   -1.9543    1.7723 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1641   -0.2667    1.9110 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5602   -0.6377    2.0460 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2033   -2.4523    0.5450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0206   -2.7851   -0.7356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1094   -1.5370   -2.3843 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2684   -2.6365   -1.6019 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9272   -0.1356   -2.0653 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5889   -0.9871   -0.6673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5422    1.6534   -1.1519 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5595    2.5376    0.0750 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8515    2.1852   -1.5863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5334    1.3122    3.0428 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0031   -1.1561   -1.8250 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9527   -2.8434   -0.4705 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1246   -1.9115   -1.3796 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8933   -1.8405    1.6971 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0564   -2.5813    0.6198 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2065    0.5927   -0.9112 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2644   -1.2050   -1.0730 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2657   -0.3789    0.1400 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4763    0.2222    2.4326 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9932    2.0078    1.1790 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  1  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  1  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
  6 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 19 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 22 24  1  0  0  0  0
 16  2  1  0  0  0  0
 11  5  1  0  0  0  0
  1 25  1  0  0  0  0
  1 26  1  0  0  0  0
  3 27  1  0  0  0  0
  3 28  1  0  0  0  0
  4 29  1  0  0  0  0
  4 30  1  0  0  0  0
  5 31  1  6  0  0  0
  7 32  1  0  0  0  0
  7 33  1  0  0  0  0
  7 34  1  0  0  0  0
  8 35  1  0  0  0  0
  8 36  1  0  0  0  0
  9 37  1  0  0  0  0
  9 38  1  0  0  0  0
 10 39  1  0  0  0  0
 10 40  1  0  0  0  0
 12 41  1  0  0  0  0
 12 42  1  0  0  0  0
 12 43  1  0  0  0  0
 15 44  1  0  0  0  0
 16 45  1  6  0  0  0
 17 46  1  0  0  0  0
 17 47  1  0  0  0  0
 18 48  1  0  0  0  0
 18 49  1  0  0  0  0
 20 50  1  0  0  0  0
 20 51  1  0  0  0  0
 20 52  1  0  0  0  0
 21 53  1  0  0  0  0
 24 54  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0011266

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC(=O)C(\[H])=C(/C([H])([H])[H])C([H])([H])C([H])([H])[C@]1([H])C(=C([H])[H])C([H])([H])C([H])([H])[C@]2([H])[C@@](C(=O)O[H])(C([H])([H])[H])C([H])([H])C([H])([H])C([H])([H])[C@@]12C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C20H30O4/c1-13(12-17(21)22)6-8-15-14(2)7-9-16-19(15,3)10-5-11-20(16,4)18(23)24/h12,15-16H,2,5-11H2,1,3-4H3,(H,21,22)(H,23,24)/b13-12+/t15-,16+,19+,20-/m1/s1

> <INCHI_KEY>
QYCOHMYDSOZCQD-PMTPZQICSA-N

> <FORMULA>
C20H30O4

> <MOLECULAR_WEIGHT>
334.456

> <EXACT_MASS>
334.214409446

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
54

> <JCHEM_AVERAGE_POLARIZABILITY>
36.698158496401064

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,4aS,5R,8aS)-5-[(3E)-4-carboxy-3-methylbut-3-en-1-yl]-1,4a-dimethyl-6-methylidene-decahydronaphthalene-1-carboxylic acid

> <ALOGPS_LOGP>
3.88

> <JCHEM_LOGP>
4.671277583333334

> <ALOGPS_LOGS>
-4.34

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-2

> <JCHEM_PKA>
5.175528929748271

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.5724332023814025

> <JCHEM_POLAR_SURFACE_AREA>
74.6

> <JCHEM_REFRACTIVITY>
93.63839999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.54e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,4aS,5R,8aS)-5-[(3E)-4-carboxy-3-methylbut-3-en-1-yl]-1,4a-dimethyl-6-methylidene-hexahydro-2H-naphthalene-1-carboxylic acid

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 54 55  0  0  0  0  0  0  0  0999 V2000
    1.6436    0.7142   -2.1760 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8664    0.5703   -1.0865 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5011    1.7780   -0.2986 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9000    1.6819    0.2628 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5656    0.4697   -0.3661 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.8601   -0.8058    0.0332 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6195   -0.8953    1.5062 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6943   -2.0058   -0.3379 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6797   -1.7075   -1.4386 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6238   -0.6080   -1.1036 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0396    0.4768   -0.2274 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5120    1.8397   -0.7812 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5713    0.4032    1.1346 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2575   -0.5758    1.5191 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3371    1.4144    2.0554 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4263   -0.8020   -0.7937 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.4298   -1.8111   -0.4639 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3281   -1.6868    0.6866 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2473   -0.5226    0.7017 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2574   -0.3612   -0.3596 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2128    0.3868    1.6673 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0782    1.5428    1.7439 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9310    2.3380    2.7315 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0670    1.8535    0.8134 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9568   -0.0969   -2.8030 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9656    1.7009   -2.4269 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4778    2.6709   -0.9963 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2617    2.0545    0.4481 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5287    2.5564    0.0008 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8912    1.6201    1.3704 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3662    0.6042   -1.4744 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4338   -1.9543    1.7723 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1641   -0.2667    1.9110 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5602   -0.6377    2.0460 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2033   -2.4523    0.5450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0206   -2.7851   -0.7356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1094   -1.5370   -2.3843 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2684   -2.6365   -1.6019 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9272   -0.1356   -2.0653 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5889   -0.9871   -0.6673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5422    1.6534   -1.1519 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5595    2.5376    0.0750 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8515    2.1852   -1.5863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5334    1.3122    3.0428 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0031   -1.1561   -1.8250 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9527   -2.8434   -0.4705 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1246   -1.9115   -1.3796 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8933   -1.8405    1.6971 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0564   -2.5813    0.6198 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2065    0.5927   -0.9112 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2644   -1.2050   -1.0730 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2657   -0.3789    0.1400 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4763    0.2222    2.4326 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9932    2.0078    1.1790 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  1
  6  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 11 13  1  1
 13 14  2  0
 13 15  1  0
  6 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  2  0
 21 22  1  0
 22 23  2  0
 22 24  1  0
 16  2  1  0
 11  5  1  0
  1 25  1  0
  1 26  1  0
  3 27  1  0
  3 28  1  0
  4 29  1  0
  4 30  1  0
  5 31  1  6
  7 32  1  0
  7 33  1  0
  7 34  1  0
  8 35  1  0
  8 36  1  0
  9 37  1  0
  9 38  1  0
 10 39  1  0
 10 40  1  0
 12 41  1  0
 12 42  1  0
 12 43  1  0
 15 44  1  0
 16 45  1  6
 17 46  1  0
 17 47  1  0
 18 48  1  0
 18 49  1  0
 20 50  1  0
 20 51  1  0
 20 52  1  0
 21 53  1  0
 24 54  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0       1.644   0.714  -2.176  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.866   0.570  -1.087  0.00  0.00           C+0
HETATM    3  C   UNK     0       0.501   1.778  -0.299  0.00  0.00           C+0
HETATM    4  C   UNK     0      -0.900   1.682   0.263  0.00  0.00           C+0
HETATM    5  C   UNK     0      -1.566   0.470  -0.366  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.860  -0.806   0.033  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.620  -0.895   1.506  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.694  -2.006  -0.338  0.00  0.00           C+0
HETATM    9  C   UNK     0      -2.680  -1.708  -1.439  0.00  0.00           C+0
HETATM   10  C   UNK     0      -3.624  -0.608  -1.104  0.00  0.00           C+0
HETATM   11  C   UNK     0      -3.040   0.477  -0.227  0.00  0.00           C+0
HETATM   12  C   UNK     0      -3.512   1.840  -0.781  0.00  0.00           C+0
HETATM   13  C   UNK     0      -3.571   0.403   1.135  0.00  0.00           C+0
HETATM   14  O   UNK     0      -4.258  -0.576   1.519  0.00  0.00           O+0
HETATM   15  O   UNK     0      -3.337   1.414   2.055  0.00  0.00           O+0
HETATM   16  C   UNK     0       0.426  -0.802  -0.794  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.430  -1.811  -0.464  0.00  0.00           C+0
HETATM   18  C   UNK     0       2.328  -1.687   0.687  0.00  0.00           C+0
HETATM   19  C   UNK     0       3.247  -0.523   0.702  0.00  0.00           C+0
HETATM   20  C   UNK     0       4.257  -0.361  -0.360  0.00  0.00           C+0
HETATM   21  C   UNK     0       3.213   0.387   1.667  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.078   1.543   1.744  0.00  0.00           C+0
HETATM   23  O   UNK     0       3.931   2.338   2.732  0.00  0.00           O+0
HETATM   24  O   UNK     0       5.067   1.853   0.813  0.00  0.00           O+0
HETATM   25  H   UNK     0       1.957  -0.097  -2.803  0.00  0.00           H+0
HETATM   26  H   UNK     0       1.966   1.701  -2.427  0.00  0.00           H+0
HETATM   27  H   UNK     0       0.478   2.671  -0.996  0.00  0.00           H+0
HETATM   28  H   UNK     0       1.262   2.054   0.448  0.00  0.00           H+0
HETATM   29  H   UNK     0      -1.529   2.556   0.001  0.00  0.00           H+0
HETATM   30  H   UNK     0      -0.891   1.620   1.370  0.00  0.00           H+0
HETATM   31  H   UNK     0      -1.366   0.604  -1.474  0.00  0.00           H+0
HETATM   32  H   UNK     0      -0.434  -1.954   1.772  0.00  0.00           H+0
HETATM   33  H   UNK     0       0.164  -0.267   1.911  0.00  0.00           H+0
HETATM   34  H   UNK     0      -1.560  -0.638   2.046  0.00  0.00           H+0
HETATM   35  H   UNK     0      -2.203  -2.452   0.545  0.00  0.00           H+0
HETATM   36  H   UNK     0      -1.021  -2.785  -0.736  0.00  0.00           H+0
HETATM   37  H   UNK     0      -2.109  -1.537  -2.384  0.00  0.00           H+0
HETATM   38  H   UNK     0      -3.268  -2.636  -1.602  0.00  0.00           H+0
HETATM   39  H   UNK     0      -3.927  -0.136  -2.065  0.00  0.00           H+0
HETATM   40  H   UNK     0      -4.589  -0.987  -0.667  0.00  0.00           H+0
HETATM   41  H   UNK     0      -4.542   1.653  -1.152  0.00  0.00           H+0
HETATM   42  H   UNK     0      -3.559   2.538   0.075  0.00  0.00           H+0
HETATM   43  H   UNK     0      -2.852   2.185  -1.586  0.00  0.00           H+0
HETATM   44  H   UNK     0      -3.533   1.312   3.043  0.00  0.00           H+0
HETATM   45  H   UNK     0      -0.003  -1.156  -1.825  0.00  0.00           H+0
HETATM   46  H   UNK     0       0.953  -2.843  -0.471  0.00  0.00           H+0
HETATM   47  H   UNK     0       2.125  -1.912  -1.380  0.00  0.00           H+0
HETATM   48  H   UNK     0       1.893  -1.841   1.697  0.00  0.00           H+0
HETATM   49  H   UNK     0       3.056  -2.581   0.620  0.00  0.00           H+0
HETATM   50  H   UNK     0       4.207   0.593  -0.911  0.00  0.00           H+0
HETATM   51  H   UNK     0       4.264  -1.205  -1.073  0.00  0.00           H+0
HETATM   52  H   UNK     0       5.266  -0.379   0.140  0.00  0.00           H+0
HETATM   53  H   UNK     0       2.476   0.222   2.433  0.00  0.00           H+0
HETATM   54  H   UNK     0       5.993   2.008   1.179  0.00  0.00           H+0
CONECT    1    2   25   26                                                  
CONECT    2    1    3   16                                                  
CONECT    3    2    4   27   28                                             
CONECT    4    3    5   29   30                                             
CONECT    5    4    6   11   31                                             
CONECT    6    5    7    8   16                                             
CONECT    7    6   32   33   34                                             
CONECT    8    6    9   35   36                                             
CONECT    9    8   10   37   38                                             
CONECT   10    9   11   39   40                                             
CONECT   11   10   12   13    5                                             
CONECT   12   11   41   42   43                                             
CONECT   13   11   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   44                                                       
CONECT   16    6   17    2   45                                             
CONECT   17   16   18   46   47                                             
CONECT   18   17   19   48   49                                             
CONECT   19   18   20   21                                                  
CONECT   20   19   50   51   52                                             
CONECT   21   19   22   53                                                  
CONECT   22   21   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   54                                                       
CONECT   25    1                                                            
CONECT   26    1                                                            
CONECT   27    3                                                            
CONECT   28    3                                                            
CONECT   29    4                                                            
CONECT   30    4                                                            
CONECT   31    5                                                            
CONECT   32    7                                                            
CONECT   33    7                                                            
CONECT   34    7                                                            
CONECT   35    8                                                            
CONECT   36    8                                                            
CONECT   37    9                                                            
CONECT   38    9                                                            
CONECT   39   10                                                            
CONECT   40   10                                                            
CONECT   41   12                                                            
CONECT   42   12                                                            
CONECT   43   12                                                            
CONECT   44   15                                                            
CONECT   45   16                                                            
CONECT   46   17                                                            
CONECT   47   17                                                            
CONECT   48   18                                                            
CONECT   49   18                                                            
CONECT   50   20                                                            
CONECT   51   20                                                            
CONECT   52   20                                                            
CONECT   53   21                                                            
CONECT   54   24                                                            
MASTER        0    0    0    0    0    0    0    0   54    0  110    0
END

RDKit          3D

54 55  0  0  0  0  0  0  0  0999 V2000
    1.6436    0.7142   -2.1760 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8664    0.5703   -1.0865 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5011    1.7780   -0.2986 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9000    1.6819    0.2628 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5656    0.4697   -0.3661 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.8601   -0.8058    0.0332 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6195   -0.8953    1.5062 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6943   -2.0058   -0.3379 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6797   -1.7075   -1.4386 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6238   -0.6080   -1.1036 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0396    0.4768   -0.2274 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5120    1.8397   -0.7812 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5713    0.4032    1.1346 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2575   -0.5758    1.5191 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3371    1.4144    2.0554 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4263   -0.8020   -0.7937 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.4298   -1.8111   -0.4639 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3281   -1.6868    0.6866 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2473   -0.5226    0.7017 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2574   -0.3612   -0.3596 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2128    0.3868    1.6673 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0782    1.5428    1.7439 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9310    2.3380    2.7315 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0670    1.8535    0.8134 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9568   -0.0969   -2.8030 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9656    1.7009   -2.4269 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4778    2.6709   -0.9963 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2617    2.0545    0.4481 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5287    2.5564    0.0008 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8912    1.6201    1.3704 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3662    0.6042   -1.4744 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4338   -1.9543    1.7723 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1641   -0.2667    1.9110 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5602   -0.6377    2.0460 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2033   -2.4523    0.5450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0206   -2.7851   -0.7356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1094   -1.5370   -2.3843 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2684   -2.6365   -1.6019 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9272   -0.1356   -2.0653 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5889   -0.9871   -0.6673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5422    1.6534   -1.1519 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5595    2.5376    0.0750 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8515    2.1852   -1.5863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5334    1.3122    3.0428 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0031   -1.1561   -1.8250 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9527   -2.8434   -0.4705 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1246   -1.9115   -1.3796 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8933   -1.8405    1.6971 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0564   -2.5813    0.6198 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2065    0.5927   -0.9112 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2644   -1.2050   -1.0730 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2657   -0.3789    0.1400 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4763    0.2222    2.4326 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9932    2.0078    1.1790 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  1
  6  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 11 13  1  1
 13 14  2  0
 13 15  1  0
  6 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  2  0
 21 22  1  0
 22 23  2  0
 22 24  1  0
 16  2  1  0
 11  5  1  0
  1 25  1  0
  1 26  1  0
  3 27  1  0
  3 28  1  0
  4 29  1  0
  4 30  1  0
  5 31  1  6
  7 32  1  0
  7 33  1  0
  7 34  1  0
  8 35  1  0
  8 36  1  0
  9 37  1  0
  9 38  1  0
 10 39  1  0
 10 40  1  0
 12 41  1  0
 12 42  1  0
 12 43  1  0
 15 44  1  0
 16 45  1  6
 17 46  1  0
 17 47  1  0
 18 48  1  0
 18 49  1  0
 20 50  1  0
 20 51  1  0
 20 52  1  0
 21 53  1  0
 24 54  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
Labda-8(17),13-diene-15,19-dioic acid	MeSH
Agathic acid	MeSH
(1R,4AS,5R,8as)-5-[(3E)-4-carboxy-3-methylbut-3-en-1-yl]-1,4a-dimethyl-6-methylidene-decahydronaphthalene-1-carboxylate	Generator

Chemical Formula

C₂₀H₃₀O₄

Average Mass

334.4560 Da

Monoisotopic Mass

334.21441 Da

IUPAC Name

(1R,4aS,5R,8aS)-5-[(3E)-4-carboxy-3-methylbut-3-en-1-yl]-1,4a-dimethyl-6-methylidene-decahydronaphthalene-1-carboxylic acid

Traditional Name

(1R,4aS,5R,8aS)-5-[(3E)-4-carboxy-3-methylbut-3-en-1-yl]-1,4a-dimethyl-6-methylidene-hexahydro-2H-naphthalene-1-carboxylic acid

CAS Registry Number

Not Available

SMILES

C\C(CC[C@@H]1C(=C)CC[C@H]2[C@@]1(C)CCC[C@@]2(C)C(O)=O)=C/C(O)=O

InChI Identifier

InChI=1S/C20H30O4/c1-13(12-17(21)22)6-8-15-14(2)7-9-16-19(15,3)10-5-11-20(16,4)18(23)24/h12,15-16H,2,5-11H2,1,3-4H3,(H,21,22)(H,23,24)/b13-12+/t15-,16+,19+,20-/m1/s1

InChI Key

QYCOHMYDSOZCQD-PMTPZQICSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Agathis australis	Plant	KNApSAcK
Chromocleista sp.	Fungi	KNApSAcK
Hymenaea oblongifolia	Plant	KNApSAcK
Unknown-fungus platensis MA7339	NPAtlas	23157615

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.88	ALOGPS
logP	4.67	ChemAxon
logS	-4.3	ALOGPS
pKa (Strongest Acidic)	4.57	ChemAxon
Physiological Charge	-2	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	74.6 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	93.64 m³·mol⁻¹	ChemAxon
Polarizability	36.7 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA013486

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78437878

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

132838614

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Smanski MJ, Casper J, Peterson RM, Yu Z, Rajski SR, Shen B: Expression of the platencin biosynthetic gene cluster in heterologous hosts yielding new platencin congeners. J Nat Prod. 2012 Dec 28;75(12):2158-67. doi: 10.1021/np3005985. Epub 2012 Nov 16. [PubMed:23157615 ]

Showing NP-Card for Agathic acid (NP0011266)

MOL for NP0011266 (Agathic acid)

3D MOL for NP0011266 (Agathic acid)

3D SDF for NP0011266 (Agathic acid)

3D-SDF for NP0011266 (Agathic acid)

PDB for NP0011266 (Agathic acid)

3D PDB for NP0011266 (Agathic acid)

SMILES for NP0011266 (Agathic acid)

INCHI for NP0011266 (Agathic acid)

Structure for NP0011266 (Agathic acid)

3D Structure for NP0011266 (Agathic acid)