Np mrd loader

Record Information
Version2.0
Created at2021-01-05 20:52:36 UTC
Updated at2021-07-15 17:07:51 UTC
NP-MRD IDNP0011063
Secondary Accession NumbersNone
Natural Product Identification
Common NamePiricyclamide TLGCM(O)NGTERCLGLP
Provided ByNPAtlasNPAtlas Logo
Description Piricyclamide TLGCM(O)NGTERCLGLP is found in Microcystis. Based on a literature review very few articles have been published on 3-[(1R,4S,10S,16S,19R,22S,28R,31S,34S,40S,43S,46S)-46-(3-carbamimidamidopropyl)-2,5,8,17,20,23,26,29,32,35,38,41,44,47-tetradecahydroxy-34-[(C-hydroxycarbonimidoyl)methyl]-19,40-bis[(1R)-1-hydroxyethyl]-31-(2-methanesulfinylethyl)-4,10,22-tris(2-methylpropyl)-11-oxo-50,51-dithia-3,6,9,12,18,21,24,27,30,33,36,39,42,45,48-pentadecaazatricyclo[26.20.4.0¹²,¹⁶]Dopentaconta-2,5,8,17,20,23,26,29,32,35,38,41,44,47-tetradecaen-43-yl]propanoic acid.
Structure
Thumb
Synonyms
ValueSource
3-[(1R,4S,10S,16S,19R,22S,28R,31S,34S,40S,43S,46S)-46-(3-Carbamimidamidopropyl)-2,5,8,17,20,23,26,29,32,35,38,41,44,47-tetradecahydroxy-34-[(C-hydroxycarbonimidoyl)methyl]-19,40-bis[(1R)-1-hydroxyethyl]-31-(2-methanesulfinylethyl)-4,10,22-tris(2-methylpropyl)-11-oxo-50,51-dithia-3,6,9,12,18,21,24,27,30,33,36,39,42,45,48-pentadecaazatricyclo[26.20.4.0,]dopentaconta-2,5,8,17,20,23,26,29,32,35,38,41,44,47-tetradecaen-43-yl]propanoateGenerator
3-[(1R,4S,10S,16S,19R,22S,28R,31S,34S,40S,43S,46S)-46-(3-Carbamimidamidopropyl)-2,5,8,17,20,23,26,29,32,35,38,41,44,47-tetradecahydroxy-34-[(C-hydroxycarbonimidoyl)methyl]-19,40-bis[(1R)-1-hydroxyethyl]-31-(2-methanesulphinylethyl)-4,10,22-tris(2-methylpropyl)-11-oxo-50,51-dithia-3,6,9,12,18,21,24,27,30,33,36,39,42,45,48-pentadecaazatricyclo[26.20.4.0,]dopentaconta-2,5,8,17,20,23,26,29,32,35,38,41,44,47-tetradecaen-43-yl]propanoateGenerator
3-[(1R,4S,10S,16S,19R,22S,28R,31S,34S,40S,43S,46S)-46-(3-Carbamimidamidopropyl)-2,5,8,17,20,23,26,29,32,35,38,41,44,47-tetradecahydroxy-34-[(C-hydroxycarbonimidoyl)methyl]-19,40-bis[(1R)-1-hydroxyethyl]-31-(2-methanesulphinylethyl)-4,10,22-tris(2-methylpropyl)-11-oxo-50,51-dithia-3,6,9,12,18,21,24,27,30,33,36,39,42,45,48-pentadecaazatricyclo[26.20.4.0,]dopentaconta-2,5,8,17,20,23,26,29,32,35,38,41,44,47-tetradecaen-43-yl]propanoic acidGenerator
Chemical FormulaC63H105N19O21S3
Average Mass1560.8300 Da
Monoisotopic Mass1559.68945 Da
IUPAC Name3-[(1R,4S,10S,16S,19R,22S,28R,31S,34S,40S,43S,46S)-46-(3-carbamimidamidopropyl)-34-(carbamoylmethyl)-19,40-bis[(1R)-1-hydroxyethyl]-31-{2-[(R)-methanesulfinyl]ethyl}-4,10,22-tris(2-methylpropyl)-2,5,8,11,17,20,23,26,29,32,35,38,41,44,47-pentadecaoxo-50,51-dithia-3,6,9,12,18,21,24,27,30,33,36,39,42,45,48-pentadecaazatricyclo[26.20.4.0^{12,16}]dopentacontan-43-yl]propanoic acid
Traditional Name3-[(1R,4S,10S,16S,19R,22S,28R,31S,34S,40S,43S,46S)-46-(3-carbamimidamidopropyl)-34-(carbamoylmethyl)-19,40-bis[(1R)-1-hydroxyethyl]-31-{2-[(R)-methanesulfinyl]ethyl}-4,10,22-tris(2-methylpropyl)-2,5,8,11,17,20,23,26,29,32,35,38,41,44,47-pentadecaoxo-50,51-dithia-3,6,9,12,18,21,24,27,30,33,36,39,42,45,48-pentadecaazatricyclo[26.20.4.0^{12,16}]dopentacontan-43-yl]propanoic acid
CAS Registry NumberNot Available
SMILES
CC(C)C[C@@H]1NC(=O)[C@@H]2CSSC[C@H](NC(=O)CNC(=O)[C@H](CC(C)C)NC(=O)[C@H](NC(=O)[C@@H]3CCCN3C(=O)[C@H](CC(C)C)NC(=O)CNC1=O)[C@@H](C)O)C(=O)N[C@@H](CCS(C)=O)C(=O)N[C@@H](CC(N)=O)C(=O)NCC(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H](CCC(O)=O)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N2
InChI Identifier
InChI=1S/C63H105N19O21S3/c1-29(2)20-37-51(91)68-24-45(86)71-40(22-31(5)6)62(102)82-18-11-13-43(82)59(99)81-50(33(8)84)61(101)78-38(21-30(3)4)52(92)69-25-46(87)72-41-27-104-105-28-42(58(98)76-37)79-54(94)34(12-10-17-67-63(65)66)73-55(95)35(14-15-48(89)90)75-60(100)49(32(7)83)80-47(88)26-70-53(93)39(23-44(64)85)77-56(96)36(74-57(41)97)16-19-106(9)103/h29-43,49-50,83-84H,10-28H2,1-9H3,(H2,64,85)(H,68,91)(H,69,92)(H,70,93)(H,71,86)(H,72,87)(H,73,95)(H,74,97)(H,75,100)(H,76,98)(H,77,96)(H,78,101)(H,79,94)(H,80,88)(H,81,99)(H,89,90)(H4,65,66,67)/t32-,33-,34+,35+,36+,37+,38+,39+,40+,41+,42+,43+,49+,50-,106?/m1/s1
InChI KeyAJEAJMSDIHYTQZ-ZYBLOIBVSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
MicrocystisNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-1.2ALOGPS
logP-13ChemAxon
logS-3ALOGPS
pKa (Strongest Acidic)3.61ChemAxon
pKa (Strongest Basic)11.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count24ChemAxon
Hydrogen Donor Count21ChemAxon
Polar Surface Area627.53 ŲChemAxon
Rotatable Bond Count20ChemAxon
Refractivity391.41 m³·mol⁻¹ChemAxon
Polarizability158.6 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA028874
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound146684889
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References