NP-MRD: Showing NP-Card for Spiroindimicin C (NP0010870)

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Record Information

Version

2.0

Created at

2021-01-05 20:41:01 UTC

Updated at

2021-07-15 17:07:18 UTC

NP-MRD ID

NP0010870

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Spiroindimicin C

Provided By

NPAtlas

Description

Spiroindimicin C is found in Streptomyces. Based on a literature review very few articles have been published on methyl (3R)-4',5-dichloro-1,2-dihydro-8',13'-diazaspiro[indole-3,10'-tetracyclo[7.6.0.0²,⁷.0¹¹,¹⁵]Pentadecane]-1'(9'),2'(7'),3',5',11',14'-hexaene-12'-carboxylate.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI

  Mrv1652306242107413D          

 44 49  0  0  0  0            999 V2000
    4.7646    0.5112   -1.1574 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4429    0.0913   -0.9604 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9156   -0.8777   -1.7956 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6490   -1.3428   -2.7008 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5601   -1.3824   -1.6781 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9810   -2.3048   -2.4347 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2785   -2.4924   -2.0052 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5181   -1.6600   -0.9331 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6294   -0.9552   -0.7150 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4262   -0.0584    0.4132 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3725   -0.3209    1.5621 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8076    0.9980    1.9735 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.4282    1.9580    0.9892 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7454    3.3060    0.8559 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2604    4.0793   -0.2026 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4488    3.4682   -1.1253 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1752    4.3954   -2.4570 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    0.1477    2.1318   -0.9735 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6148    1.3713    0.0529 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9649   -0.2934    0.8523 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9068    0.0918    1.7703 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0270   -0.5873    1.5669 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2775   -0.6123    2.1750 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2809   -1.4442    1.7380 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0185   -2.2710    0.6627 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2679   -3.3464    0.0736 Cl  0  0  0  0  0  0  0  0  0  0  0  0
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   -2.8223   -1.4359    0.4962 C   0  0  0  0  0  0  0  0  0  0  0  0
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    4.8495    1.4188   -1.7874 H   0  0  0  0  0  0  0  0  0  0  0  0
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    5.3914   -0.2960   -1.5668 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4589   -2.7880   -3.2301 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0023   -3.1740   -2.4132 H   0  0  0  0  0  0  0  0  0  0  0  0
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    0.8141   -0.8252    2.4024 H   0  0  0  0  0  0  0  0  0  0  0  0
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    2.3913    3.8066    1.5840 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5369    5.1348   -0.2655 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4961    1.6596   -1.7111 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7254    0.8103    2.4965 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4792    0.0323    3.0118 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2688   -1.4538    2.2298 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5615   -2.9101   -0.8069 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
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  8  9  1  0  0  0  0
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 19 13  1  0  0  0  0
 28 22  1  0  0  0  0
  1 30  1  0  0  0  0
  1 31  1  0  0  0  0
  1 32  1  0  0  0  0
  6 33  1  0  0  0  0
  7 34  1  0  0  0  0
 11 35  1  0  0  0  0
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 12 37  1  0  0  0  0
 14 38  1  0  0  0  0
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 18 40  1  0  0  0  0
 21 41  1  0  0  0  0
 23 42  1  0  0  0  0
 24 43  1  0  0  0  0
 27 44  1  0  0  0  0
M  END

     RDKit          3D

 44 49  0  0  0  0  0  0  0  0999 V2000
    4.7646    0.5112   -1.1574 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4429    0.0913   -0.9604 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9156   -0.8777   -1.7956 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6490   -1.3428   -2.7008 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5601   -1.3824   -1.6781 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9810   -2.3048   -2.4347 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2785   -2.4924   -2.0052 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5181   -1.6600   -0.9331 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6294   -0.9552   -0.7150 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4262   -0.0584    0.4132 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3725   -0.3209    1.5621 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8076    0.9980    1.9735 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.4282    1.9580    0.9892 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7454    3.3060    0.8559 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2604    4.0793   -0.2026 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4488    3.4682   -1.1253 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1752    4.3954   -2.4570 Cl  0  0  0  0  0  0  0  0  0  0  0  0
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   -3.0270   -0.5873    1.5669 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -5.2809   -1.4442    1.7380 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0185   -2.2710    0.6627 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2679   -3.3464    0.0736 Cl  0  0  0  0  0  0  0  0  0  0  0  0
   -3.8006   -2.2844    0.0275 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8223   -1.4359    0.4962 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5099   -1.2463    0.0442 C   0  0  0  0  0  0  0  0  0  0  0  0
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    5.2057    0.7827   -0.1723 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3914   -0.2960   -1.5668 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4589   -2.7880   -3.2301 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0023   -3.1740   -2.4132 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2198   -0.9401    1.2725 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8141   -0.8252    2.4024 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.5615   -2.9101   -0.8069 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
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  8  9  1  0
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M  END

  Mrv1652306242107413D          

 44 49  0  0  0  0            999 V2000
    4.7646    0.5112   -1.1574 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4429    0.0913   -0.9604 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9156   -0.8777   -1.7956 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6490   -1.3428   -2.7008 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5601   -1.3824   -1.6781 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9810   -2.3048   -2.4347 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2785   -2.4924   -2.0052 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.6294   -0.9552   -0.7150 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4262   -0.0584    0.4132 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3725   -0.3209    1.5621 C   0  0  2  0  0  0  0  0  0  0  0  0
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    1.4282    1.9580    0.9892 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.4488    3.4682   -1.1253 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.0270   -0.5873    1.5669 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.4961    1.6596   -1.7111 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7254    0.8103    2.4965 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4792    0.0323    3.0118 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2688   -1.4538    2.2298 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5615   -2.9101   -0.8069 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
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 29  8  1  0  0  0  0
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  6 33  1  0  0  0  0
  7 34  1  0  0  0  0
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 24 43  1  0  0  0  0
 27 44  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0010870

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]N1C([H])=C2C3=C(N([H])C4=C([H])C([H])=C(Cl)C([H])=C34)[C@]3(C4=C([H])C(Cl)=C([H])C([H])=C4N([H])C3([H])[H])C2=C1C(=O)OC([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C22H15Cl2N3O2/c1-29-21(28)19-18-13(8-25-19)17-12-6-10(23)2-4-15(12)27-20(17)22(18)9-26-16-5-3-11(24)7-14(16)22/h2-8,25-27H,9H2,1H3/t22-/m1/s1

> <INCHI_KEY>
CANUOBPCCLZMKM-JOCHJYFZSA-N

> <FORMULA>
C22H15Cl2N3O2

> <MOLECULAR_WEIGHT>
424.28

> <EXACT_MASS>
423.0541321

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
44

> <JCHEM_AVERAGE_POLARIZABILITY>
43.75330888475122

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl (3R)-4',5-dichloro-1,2-dihydro-8',13'-diazaspiro[indole-3,10'-tetracyclo[7.6.0.0^{2,7}.0^{11,15}]pentadecane]-1'(9'),2',4',6',11',14'-hexaene-12'-carboxylate

> <ALOGPS_LOGP>
5.15

> <JCHEM_LOGP>
4.4006882869999995

> <ALOGPS_LOGS>
-5.29

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.89309586791087

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.616881126085364

> <JCHEM_PKA_STRONGEST_BASIC>
2.921776001552158

> <JCHEM_POLAR_SURFACE_AREA>
69.91

> <JCHEM_REFRACTIVITY>
115.81260000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.15e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl (3R)-4',5-dichloro-1,2-dihydro-8',13'-diazaspiro[indole-3,10'-tetracyclo[7.6.0.0^{2,7}.0^{11,15}]pentadecane]-1'(9'),2',4',6',11',14'-hexaene-12'-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 44 49  0  0  0  0  0  0  0  0999 V2000
    4.7646    0.5112   -1.1574 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4429    0.0913   -0.9604 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9156   -0.8777   -1.7956 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6490   -1.3428   -2.7008 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5601   -1.3824   -1.6781 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9810   -2.3048   -2.4347 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2785   -2.4924   -2.0052 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5181   -1.6600   -0.9331 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6294   -0.9552   -0.7150 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4262   -0.0584    0.4132 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3725   -0.3209    1.5621 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8076    0.9980    1.9735 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.4282    1.9580    0.9892 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7454    3.3060    0.8559 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2604    4.0793   -0.2026 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4488    3.4682   -1.1253 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1752    4.3954   -2.4570 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    0.1477    2.1318   -0.9735 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6148    1.3713    0.0529 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9649   -0.2934    0.8523 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9068    0.0918    1.7703 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0270   -0.5873    1.5669 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2775   -0.6123    2.1750 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2809   -1.4442    1.7380 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0185   -2.2710    0.6627 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2679   -3.3464    0.0736 Cl  0  0  0  0  0  0  0  0  0  0  0  0
   -3.8006   -2.2844    0.0275 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8223   -1.4359    0.4962 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5099   -1.2463    0.0442 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8495    1.4188   -1.7874 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2057    0.7827   -0.1723 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3914   -0.2960   -1.5668 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4589   -2.7880   -3.2301 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0023   -3.1740   -2.4132 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2198   -0.9401    1.2725 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8141   -0.8252    2.4024 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3197    1.2559    2.8416 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3913    3.8066    1.5840 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5369    5.1348   -0.2655 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4961    1.6596   -1.7111 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7254    0.8103    2.4965 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4792    0.0323    3.0118 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2688   -1.4538    2.2298 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5615   -2.9101   -0.8069 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  1  0
 10 11  1  1
 11 12  1  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  2  0
 16 17  1  0
 16 18  1  0
 18 19  2  0
 10 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  2  0
 25 26  1  0
 25 27  1  0
 27 28  2  0
 28 29  1  0
  9  5  2  0
 19 10  1  0
 29 20  2  0
 29  8  1  0
 19 13  1  0
 28 22  1  0
  1 30  1  0
  1 31  1  0
  1 32  1  0
  6 33  1  0
  7 34  1  0
 11 35  1  0
 11 36  1  0
 12 37  1  0
 14 38  1  0
 15 39  1  0
 18 40  1  0
 21 41  1  0
 23 42  1  0
 24 43  1  0
 27 44  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0       4.765   0.511  -1.157  0.00  0.00           C+0
HETATM    2  O   UNK     0       3.443   0.091  -0.960  0.00  0.00           O+0
HETATM    3  C   UNK     0       2.916  -0.878  -1.796  0.00  0.00           C+0
HETATM    4  O   UNK     0       3.649  -1.343  -2.701  0.00  0.00           O+0
HETATM    5  C   UNK     0       1.560  -1.382  -1.678  0.00  0.00           C+0
HETATM    6  N   UNK     0       0.981  -2.305  -2.435  0.00  0.00           N+0
HETATM    7  C   UNK     0      -0.279  -2.492  -2.005  0.00  0.00           C+0
HETATM    8  C   UNK     0      -0.518  -1.660  -0.933  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.629  -0.955  -0.715  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.426  -0.058   0.413  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.373  -0.321   1.562  0.00  0.00           C+0
HETATM   12  N   UNK     0       1.808   0.998   1.974  0.00  0.00           N+0
HETATM   13  C   UNK     0       1.428   1.958   0.989  0.00  0.00           C+0
HETATM   14  C   UNK     0       1.745   3.306   0.856  0.00  0.00           C+0
HETATM   15  C   UNK     0       1.260   4.079  -0.203  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.449   3.468  -1.125  0.00  0.00           C+0
HETATM   17 Cl   UNK     0      -0.175   4.395  -2.457  0.00  0.00          Cl+0
HETATM   18  C   UNK     0       0.148   2.132  -0.974  0.00  0.00           C+0
HETATM   19  C   UNK     0       0.615   1.371   0.053  0.00  0.00           C+0
HETATM   20  C   UNK     0      -0.965  -0.293   0.852  0.00  0.00           C+0
HETATM   21  N   UNK     0      -1.907   0.092   1.770  0.00  0.00           N+0
HETATM   22  C   UNK     0      -3.027  -0.587   1.567  0.00  0.00           C+0
HETATM   23  C   UNK     0      -4.277  -0.612   2.175  0.00  0.00           C+0
HETATM   24  C   UNK     0      -5.281  -1.444   1.738  0.00  0.00           C+0
HETATM   25  C   UNK     0      -5.019  -2.271   0.663  0.00  0.00           C+0
HETATM   26 Cl   UNK     0      -6.268  -3.346   0.074  0.00  0.00          Cl+0
HETATM   27  C   UNK     0      -3.801  -2.284   0.028  0.00  0.00           C+0
HETATM   28  C   UNK     0      -2.822  -1.436   0.496  0.00  0.00           C+0
HETATM   29  C   UNK     0      -1.510  -1.246   0.044  0.00  0.00           C+0
HETATM   30  H   UNK     0       4.849   1.419  -1.787  0.00  0.00           H+0
HETATM   31  H   UNK     0       5.206   0.783  -0.172  0.00  0.00           H+0
HETATM   32  H   UNK     0       5.391  -0.296  -1.567  0.00  0.00           H+0
HETATM   33  H   UNK     0       1.459  -2.788  -3.230  0.00  0.00           H+0
HETATM   34  H   UNK     0      -1.002  -3.174  -2.413  0.00  0.00           H+0
HETATM   35  H   UNK     0       2.220  -0.940   1.272  0.00  0.00           H+0
HETATM   36  H   UNK     0       0.814  -0.825   2.402  0.00  0.00           H+0
HETATM   37  H   UNK     0       2.320   1.256   2.842  0.00  0.00           H+0
HETATM   38  H   UNK     0       2.391   3.807   1.584  0.00  0.00           H+0
HETATM   39  H   UNK     0       1.537   5.135  -0.266  0.00  0.00           H+0
HETATM   40  H   UNK     0      -0.496   1.660  -1.711  0.00  0.00           H+0
HETATM   41  H   UNK     0      -1.725   0.810   2.497  0.00  0.00           H+0
HETATM   42  H   UNK     0      -4.479   0.032   3.012  0.00  0.00           H+0
HETATM   43  H   UNK     0      -6.269  -1.454   2.230  0.00  0.00           H+0
HETATM   44  H   UNK     0      -3.562  -2.910  -0.807  0.00  0.00           H+0
CONECT    1    2   30   31   32                                             
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6    9                                                  
CONECT    6    5    7   33                                                  
CONECT    7    6    8   34                                                  
CONECT    8    7    9   29                                                  
CONECT    9    8   10    5                                                  
CONECT   10    9   11   20   19                                             
CONECT   11   10   12   35   36                                             
CONECT   12   11   13   37                                                  
CONECT   13   12   14   19                                                  
CONECT   14   13   15   38                                                  
CONECT   15   14   16   39                                                  
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19   40                                                  
CONECT   19   18   10   13                                                  
CONECT   20   10   21   29                                                  
CONECT   21   20   22   41                                                  
CONECT   22   21   23   28                                                  
CONECT   23   22   24   42                                                  
CONECT   24   23   25   43                                                  
CONECT   25   24   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28   44                                                  
CONECT   28   27   29   22                                                  
CONECT   29   28   20    8                                                  
CONECT   30    1                                                            
CONECT   31    1                                                            
CONECT   32    1                                                            
CONECT   33    6                                                            
CONECT   34    7                                                            
CONECT   35   11                                                            
CONECT   36   11                                                            
CONECT   37   12                                                            
CONECT   38   14                                                            
CONECT   39   15                                                            
CONECT   40   18                                                            
CONECT   41   21                                                            
CONECT   42   23                                                            
CONECT   43   24                                                            
CONECT   44   27                                                            
MASTER        0    0    0    0    0    0    0    0   44    0   98    0
END

RDKit          3D

44 49  0  0  0  0  0  0  0  0999 V2000
    4.7646    0.5112   -1.1574 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4429    0.0913   -0.9604 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9156   -0.8777   -1.7956 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6490   -1.3428   -2.7008 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5601   -1.3824   -1.6781 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9810   -2.3048   -2.4347 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2785   -2.4924   -2.0052 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5181   -1.6600   -0.9331 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6294   -0.9552   -0.7150 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4262   -0.0584    0.4132 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3725   -0.3209    1.5621 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8076    0.9980    1.9735 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.4282    1.9580    0.9892 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7454    3.3060    0.8559 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2604    4.0793   -0.2026 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4488    3.4682   -1.1253 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1752    4.3954   -2.4570 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    0.1477    2.1318   -0.9735 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6148    1.3713    0.0529 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9649   -0.2934    0.8523 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9068    0.0918    1.7703 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0270   -0.5873    1.5669 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2775   -0.6123    2.1750 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2809   -1.4442    1.7380 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0185   -2.2710    0.6627 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2679   -3.3464    0.0736 Cl  0  0  0  0  0  0  0  0  0  0  0  0
   -3.8006   -2.2844    0.0275 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8223   -1.4359    0.4962 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5099   -1.2463    0.0442 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8495    1.4188   -1.7874 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2057    0.7827   -0.1723 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3914   -0.2960   -1.5668 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4589   -2.7880   -3.2301 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0023   -3.1740   -2.4132 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2198   -0.9401    1.2725 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8141   -0.8252    2.4024 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3197    1.2559    2.8416 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3913    3.8066    1.5840 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5369    5.1348   -0.2655 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4961    1.6596   -1.7111 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7254    0.8103    2.4965 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4792    0.0323    3.0118 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2688   -1.4538    2.2298 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5615   -2.9101   -0.8069 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  1  0
 10 11  1  1
 11 12  1  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  2  0
 16 17  1  0
 16 18  1  0
 18 19  2  0
 10 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  2  0
 25 26  1  0
 25 27  1  0
 27 28  2  0
 28 29  1  0
  9  5  2  0
 19 10  1  0
 29 20  2  0
 29  8  1  0
 19 13  1  0
 28 22  1  0
  1 30  1  0
  1 31  1  0
  1 32  1  0
  6 33  1  0
  7 34  1  0
 11 35  1  0
 11 36  1  0
 12 37  1  0
 14 38  1  0
 15 39  1  0
 18 40  1  0
 21 41  1  0
 23 42  1  0
 24 43  1  0
 27 44  1  0
M  END

View in JSmol View NMR Assignments View DFT Assignments 3D Conformers

Synonyms

Value	Source
Methyl (3R)-4',5-dichloro-1,2-dihydro-8',13'-diazaspiro[indole-3,10'-tetracyclo[7.6.0.0,.0,]pentadecane]-1'(9'),2'(7'),3',5',11',14'-hexaene-12'-carboxylic acid	Generator

Chemical Formula

C₂₂H₁₅Cl₂N₃O₂

Average Mass

424.2800 Da

Monoisotopic Mass

423.05413 Da

IUPAC Name

methyl (3R)-4',5-dichloro-1,2-dihydro-8',13'-diazaspiro[indole-3,10'-tetracyclo[7.6.0.0^{2,7}.0^{11,15}]pentadecane]-1'(9'),2',4',6',11',14'-hexaene-12'-carboxylate

Traditional Name

methyl (3R)-4',5-dichloro-1,2-dihydro-8',13'-diazaspiro[indole-3,10'-tetracyclo[7.6.0.0^{2,7}.0^{11,15}]pentadecane]-1'(9'),2',4',6',11',14'-hexaene-12'-carboxylate

CAS Registry Number

Not Available

SMILES

COC(=O)C1=C2C(=CN1)C1=C(NC3=C1C=C(Cl)C=C3)[C@@]21CNC2=C1C=C(Cl)C=C2

InChI Identifier

InChI=1S/C22H15Cl2N3O2/c1-29-21(28)19-18-13(8-25-19)17-12-6-10(23)2-4-15(12)27-20(17)22(18)9-26-16-5-3-11(24)7-14(16)22/h2-8,25-27H,9H2,1H3/t22-/m1/s1

InChI Key

CANUOBPCCLZMKM-JOCHJYFZSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 150 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 175 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 225 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 250 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Streptomyces	NPAtlas	22694269

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.15	ALOGPS
logP	4.4	ChemAxon
logS	-5.3	ALOGPS
pKa (Strongest Acidic)	11.62	ChemAxon
pKa (Strongest Basic)	2.92	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	69.91 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	115.81 m³·mol⁻¹	ChemAxon
Polarizability	43.75 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA014544

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

29214710

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

60166299

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for Spiroindimicin C (NP0010870)

MOL for NP0010870 (Spiroindimicin C)

3D MOL for NP0010870 (Spiroindimicin C)

3D SDF for NP0010870 (Spiroindimicin C)

3D-SDF for NP0010870 (Spiroindimicin C)

PDB for NP0010870 (Spiroindimicin C)

3D PDB for NP0010870 (Spiroindimicin C)

SMILES for NP0010870 (Spiroindimicin C)

INCHI for NP0010870 (Spiroindimicin C)

Structure for NP0010870 (Spiroindimicin C)

3D Structure for NP0010870 (Spiroindimicin C)