Np mrd loader

Record Information
Version2.0
Created at2021-01-05 20:08:49 UTC
Updated at2021-07-15 17:06:54 UTC
NP-MRD IDNP0010726
Secondary Accession NumbersNone
Natural Product Identification
Common NamePeptidolipin E
Provided ByNPAtlasNPAtlas Logo
Description Peptidolipin E is found in Nocardia sp. Peptidolipin E was first documented in 2012 (PMID: 22482367). Based on a literature review very few articles have been published on (3R,6S,9S,12R,16S,19S,22S,27aR)-3-[(2S)-butan-2-yl]-1,4,7,14,17,20-hexahydroxy-16-[(1R)-1-hydroxyethyl]-9-[(1R)-1-methoxyethyl]-22-methyl-12-[(16Z)-pentacos-16-en-1-yl]-6,19-bis(propan-2-yl)-3H,6H,9H,10H,12H,13H,16H,19H,22H,23H,25H,26H,27H,27aH-pyrrolo[2,1-l]1-oxa-4,7,10,13,16,19,22-heptaazacyclopentacosane-10,23-dione.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC61H109N7O11
Average Mass1116.5810 Da
Monoisotopic Mass1115.81851 Da
IUPAC Name(3R,6S,9S,12R,16S,19S,22S,27aR)-3-[(2S)-butan-2-yl]-16-[(1R)-1-hydroxyethyl]-9-[(1R)-1-methoxyethyl]-22-methyl-12-[(16Z)-pentacos-16-en-1-yl]-6,19-bis(propan-2-yl)-hexacosahydropyrrolo[2,1-l]1-oxa-4,7,10,13,16,19,22-heptaazacyclopentacosan-1,4,7,10,14,17,20,23-octone
Traditional Name(3R,6S,9S,12R,16S,19S,22S,27aR)-3-[(2S)-butan-2-yl]-16-[(1R)-1-hydroxyethyl]-6,19-diisopropyl-9-[(1R)-1-methoxyethyl]-22-methyl-12-[(16Z)-pentacos-16-en-1-yl]-octadecahydropyrrolo[2,1-l]1-oxa-4,7,10,13,16,19,22-heptaazacyclopentacosan-1,4,7,10,14,17,20,23-octone
CAS Registry NumberNot Available
SMILES
CCCCCCCC\C=C/CCCCCCCCCCCCCCC[C@@H]1CC(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](C)C(=O)N2CCC[C@@H]2C(=O)N[C@H]([C@@H](C)CC)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H]([C@@H](C)OC)C(=O)O1
InChI Identifier
InChI=1S/C61H109N7O11/c1-12-14-15-16-17-18-19-20-21-22-23-24-25-26-27-28-29-30-31-32-33-34-35-37-47-40-49(70)63-53(45(9)69)59(75)65-50(41(3)4)56(72)62-44(8)60(76)68-39-36-38-48(68)55(71)66-52(43(7)13-2)58(74)64-51(42(5)6)57(73)67-54(46(10)78-11)61(77)79-47/h20-21,41-48,50-54,69H,12-19,22-40H2,1-11H3,(H,62,72)(H,63,70)(H,64,74)(H,65,75)(H,66,71)(H,67,73)/b21-20-/t43-,44-,45+,46+,47+,48+,50-,51-,52+,53-,54-/m0/s1
InChI KeyFDSYBTTXIDEREA-XWTMVZHXSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Nocardia sp.NPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP6.52ALOGPS
logP9.67ChemAxon
logS-5.8ALOGPS
pKa (Strongest Acidic)11.36ChemAxon
pKa (Strongest Basic)-2.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count7ChemAxon
Polar Surface Area250.67 ŲChemAxon
Rotatable Bond Count30ChemAxon
Refractivity308.47 m³·mol⁻¹ChemAxon
Polarizability126.46 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA002933
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID29214370
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound57409018
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Wyche TP, Hou Y, Vazquez-Rivera E, Braun D, Bugni TS: Peptidolipins B-F, antibacterial lipopeptides from an ascidian-derived Nocardia sp. J Nat Prod. 2012 Apr 27;75(4):735-40. doi: 10.1021/np300016r. Epub 2012 Apr 6. [PubMed:22482367 ]