NP-MRD: Showing NP-Card for Seimatopolide A (NP0010701)

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Record Information

Version

2.0

Created at

2021-01-05 20:07:52 UTC

Updated at

2021-07-15 17:06:50 UTC

NP-MRD ID

NP0010701

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Seimatopolide A

Provided By

NPAtlas

Description

Seimatopolide A is found in Seimatosporium discosioides.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242107403D          

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M  END

     RDKit          3D

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M  END


  Mrv1652306242107403D          

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   -0.5550    0.1664    1.5686 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4332    2.0453    0.7361 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8077    1.0723    1.2323 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1898    2.1609   -1.3812 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2612    0.2267   -2.4406 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7746    1.3125   -1.5681 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2079    3.3265   -0.8890 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7706    2.0129    1.4310 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5454   -0.1319    1.9108 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0795   -0.6465   -1.1420 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9611   -1.4851   -0.7657 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4674   -3.0018    0.2847 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4225   -2.1794   -0.8602 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  1  0  0  0  0
 14 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 21 23  1  0  0  0  0
 23 10  1  0  0  0  0
  1 24  1  0  0  0  0
  1 25  1  0  0  0  0
  1 26  1  0  0  0  0
  2 27  1  0  0  0  0
  2 28  1  0  0  0  0
  3 29  1  0  0  0  0
  3 30  1  0  0  0  0
  4 31  1  0  0  0  0
  4 32  1  0  0  0  0
  5 33  1  0  0  0  0
  5 34  1  0  0  0  0
  6 35  1  0  0  0  0
  6 36  1  0  0  0  0
  7 37  1  0  0  0  0
  7 38  1  0  0  0  0
  8 39  1  0  0  0  0
  8 40  1  0  0  0  0
  9 41  1  0  0  0  0
  9 42  1  0  0  0  0
 10 43  1  1  0  0  0
 11 44  1  0  0  0  0
 11 45  1  0  0  0  0
 12 46  1  6  0  0  0
 13 47  1  0  0  0  0
 14 48  1  6  0  0  0
 15 49  1  0  0  0  0
 16 50  1  0  0  0  0
 17 51  1  0  0  0  0
 18 52  1  6  0  0  0
 19 53  1  0  0  0  0
 20 54  1  0  0  0  0
 20 55  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0010701

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@@]1([H])\C([H])=C([H])/[C@@]([H])(O[H])[C@]([H])(O[H])C([H])([H])[C@@]([H])(OC(=O)C1([H])[H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C18H32O5/c1-2-3-4-5-6-7-8-9-15-13-17(21)16(20)11-10-14(19)12-18(22)23-15/h10-11,14-17,19-21H,2-9,12-13H2,1H3/b11-10-/t14-,15-,16+,17+/m0/s1

> <INCHI_KEY>
VKFBQLMPTJTKBZ-PONYRBOISA-N

> <FORMULA>
C18H32O5

> <MOLECULAR_WEIGHT>
328.449

> <EXACT_MASS>
328.22497413

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
55

> <JCHEM_AVERAGE_POLARIZABILITY>
36.95419788826013

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(4R,7R,8R,10S)-4,7,8-trihydroxy-10-nonyl-3,4,7,8,9,10-hexahydro-2H-oxecin-2-one

> <ALOGPS_LOGP>
2.74

> <JCHEM_LOGP>
2.6081387616666665

> <ALOGPS_LOGS>
-2.82

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.550808692059142

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.587049258472309

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9618595000209345

> <JCHEM_POLAR_SURFACE_AREA>
86.99

> <JCHEM_REFRACTIVITY>
89.77439999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.93e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(4R,7R,8R,10S)-4,7,8-trihydroxy-10-nonyl-3,4,7,8,9,10-hexahydrooxecin-2-one

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 55 55  0  0  0  0  0  0  0  0999 V2000
    6.9221   -0.8607    0.6088 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8815   -0.6665    1.7073 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0915    0.5566    1.3731 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3826    0.4617    0.0515 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4180   -0.6752    0.0113 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6997   -0.7948   -1.3016 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9105    0.4603   -1.5970 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8678    0.7581   -0.5352 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1283   -0.3546   -0.4023 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1742   -0.0898    0.6398 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.0094    1.1169    0.4300 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6940    1.2825   -0.8700 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.5647    0.2533   -1.7697 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1718    1.6654   -0.6951 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.2587    3.0707   -0.7745 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7142    1.2718    0.6099 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1579    0.0691    0.9095 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1262   -0.9981   -0.1172 C   0  0  2  0  0  0  0  0  0  0  0  0
   -6.3768   -1.6567   -0.0026 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0018   -1.9873    0.0889 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0994   -1.6126    1.2139 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6870   -1.6739    2.3544 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8241   -1.2622    0.9792 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5771   -1.6839   -0.0599 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8753   -1.2063    1.0700 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0621    0.0472    0.0013 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4457   -0.4664    2.6545 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2270   -1.5498    1.8038 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8326    1.4029    1.2754 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3260    0.7880    2.1413 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8629    1.4406   -0.1094 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1058    0.3286   -0.7774 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9744   -1.6281    0.2106 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6982   -0.5543    0.8620 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4588   -0.8776   -2.1173 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0051   -1.6572   -1.3192 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6360    1.2922   -1.6958 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4265    0.3924   -2.6091 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4142    0.9484    0.4085 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4064    1.7241   -0.8220 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5080   -0.7181   -1.3721 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4647   -1.2355   -0.0029 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5550    0.1664    1.5686 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4332    2.0453    0.7361 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8077    1.0723    1.2323 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1898    2.1609   -1.3812 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2612    0.2267   -2.4406 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7746    1.3125   -1.5681 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2079    3.3265   -0.8890 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7706    2.0129    1.4310 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5454   -0.1319    1.9108 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0795   -0.6465   -1.1420 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9611   -1.4851   -0.7657 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4674   -3.0018    0.2847 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4225   -2.1794   -0.8602 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 14 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  1  0
 18 20  1  0
 20 21  1  0
 21 22  2  0
 21 23  1  0
 23 10  1  0
  1 24  1  0
  1 25  1  0
  1 26  1  0
  2 27  1  0
  2 28  1  0
  3 29  1  0
  3 30  1  0
  4 31  1  0
  4 32  1  0
  5 33  1  0
  5 34  1  0
  6 35  1  0
  6 36  1  0
  7 37  1  0
  7 38  1  0
  8 39  1  0
  8 40  1  0
  9 41  1  0
  9 42  1  0
 10 43  1  1
 11 44  1  0
 11 45  1  0
 12 46  1  6
 13 47  1  0
 14 48  1  6
 15 49  1  0
 16 50  1  0
 17 51  1  0
 18 52  1  6
 19 53  1  0
 20 54  1  0
 20 55  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0       6.922  -0.861   0.609  0.00  0.00           C+0
HETATM    2  C   UNK     0       5.882  -0.667   1.707  0.00  0.00           C+0
HETATM    3  C   UNK     0       5.091   0.557   1.373  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.383   0.462   0.052  0.00  0.00           C+0
HETATM    5  C   UNK     0       3.418  -0.675   0.011  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.700  -0.795  -1.302  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.911   0.460  -1.597  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.868   0.758  -0.535  0.00  0.00           C+0
HETATM    9  C   UNK     0      -0.128  -0.355  -0.402  0.00  0.00           C+0
HETATM   10  C   UNK     0      -1.174  -0.090   0.640  0.00  0.00           C+0
HETATM   11  C   UNK     0      -2.009   1.117   0.430  0.00  0.00           C+0
HETATM   12  C   UNK     0      -2.694   1.283  -0.870  0.00  0.00           C+0
HETATM   13  O   UNK     0      -2.565   0.253  -1.770  0.00  0.00           O+0
HETATM   14  C   UNK     0      -4.172   1.665  -0.695  0.00  0.00           C+0
HETATM   15  O   UNK     0      -4.259   3.071  -0.775  0.00  0.00           O+0
HETATM   16  C   UNK     0      -4.714   1.272   0.610  0.00  0.00           C+0
HETATM   17  C   UNK     0      -5.158   0.069   0.910  0.00  0.00           C+0
HETATM   18  C   UNK     0      -5.126  -0.998  -0.117  0.00  0.00           C+0
HETATM   19  O   UNK     0      -6.377  -1.657  -0.003  0.00  0.00           O+0
HETATM   20  C   UNK     0      -4.002  -1.987   0.089  0.00  0.00           C+0
HETATM   21  C   UNK     0      -3.099  -1.613   1.214  0.00  0.00           C+0
HETATM   22  O   UNK     0      -3.687  -1.674   2.354  0.00  0.00           O+0
HETATM   23  O   UNK     0      -1.824  -1.262   0.979  0.00  0.00           O+0
HETATM   24  H   UNK     0       6.577  -1.684  -0.060  0.00  0.00           H+0
HETATM   25  H   UNK     0       7.875  -1.206   1.070  0.00  0.00           H+0
HETATM   26  H   UNK     0       7.062   0.047   0.001  0.00  0.00           H+0
HETATM   27  H   UNK     0       6.446  -0.466   2.655  0.00  0.00           H+0
HETATM   28  H   UNK     0       5.227  -1.550   1.804  0.00  0.00           H+0
HETATM   29  H   UNK     0       5.833   1.403   1.275  0.00  0.00           H+0
HETATM   30  H   UNK     0       4.326   0.788   2.141  0.00  0.00           H+0
HETATM   31  H   UNK     0       3.863   1.441  -0.109  0.00  0.00           H+0
HETATM   32  H   UNK     0       5.106   0.329  -0.777  0.00  0.00           H+0
HETATM   33  H   UNK     0       3.974  -1.628   0.211  0.00  0.00           H+0
HETATM   34  H   UNK     0       2.698  -0.554   0.862  0.00  0.00           H+0
HETATM   35  H   UNK     0       3.459  -0.878  -2.117  0.00  0.00           H+0
HETATM   36  H   UNK     0       2.005  -1.657  -1.319  0.00  0.00           H+0
HETATM   37  H   UNK     0       2.636   1.292  -1.696  0.00  0.00           H+0
HETATM   38  H   UNK     0       1.427   0.392  -2.609  0.00  0.00           H+0
HETATM   39  H   UNK     0       1.414   0.948   0.409  0.00  0.00           H+0
HETATM   40  H   UNK     0       0.406   1.724  -0.822  0.00  0.00           H+0
HETATM   41  H   UNK     0      -0.508  -0.718  -1.372  0.00  0.00           H+0
HETATM   42  H   UNK     0       0.465  -1.236  -0.003  0.00  0.00           H+0
HETATM   43  H   UNK     0      -0.555   0.166   1.569  0.00  0.00           H+0
HETATM   44  H   UNK     0      -1.433   2.045   0.736  0.00  0.00           H+0
HETATM   45  H   UNK     0      -2.808   1.072   1.232  0.00  0.00           H+0
HETATM   46  H   UNK     0      -2.190   2.161  -1.381  0.00  0.00           H+0
HETATM   47  H   UNK     0      -3.261   0.227  -2.441  0.00  0.00           H+0
HETATM   48  H   UNK     0      -4.775   1.313  -1.568  0.00  0.00           H+0
HETATM   49  H   UNK     0      -5.208   3.326  -0.889  0.00  0.00           H+0
HETATM   50  H   UNK     0      -4.771   2.013   1.431  0.00  0.00           H+0
HETATM   51  H   UNK     0      -5.545  -0.132   1.911  0.00  0.00           H+0
HETATM   52  H   UNK     0      -5.080  -0.647  -1.142  0.00  0.00           H+0
HETATM   53  H   UNK     0      -6.961  -1.485  -0.766  0.00  0.00           H+0
HETATM   54  H   UNK     0      -4.467  -3.002   0.285  0.00  0.00           H+0
HETATM   55  H   UNK     0      -3.422  -2.179  -0.860  0.00  0.00           H+0
CONECT    1    2   24   25   26                                             
CONECT    2    1    3   27   28                                             
CONECT    3    2    4   29   30                                             
CONECT    4    3    5   31   32                                             
CONECT    5    4    6   33   34                                             
CONECT    6    5    7   35   36                                             
CONECT    7    6    8   37   38                                             
CONECT    8    7    9   39   40                                             
CONECT    9    8   10   41   42                                             
CONECT   10    9   11   23   43                                             
CONECT   11   10   12   44   45                                             
CONECT   12   11   13   14   46                                             
CONECT   13   12   47                                                       
CONECT   14   12   15   16   48                                             
CONECT   15   14   49                                                       
CONECT   16   14   17   50                                                  
CONECT   17   16   18   51                                                  
CONECT   18   17   19   20   52                                             
CONECT   19   18   53                                                       
CONECT   20   18   21   54   55                                             
CONECT   21   20   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21   10                                                       
CONECT   24    1                                                            
CONECT   25    1                                                            
CONECT   26    1                                                            
CONECT   27    2                                                            
CONECT   28    2                                                            
CONECT   29    3                                                            
CONECT   30    3                                                            
CONECT   31    4                                                            
CONECT   32    4                                                            
CONECT   33    5                                                            
CONECT   34    5                                                            
CONECT   35    6                                                            
CONECT   36    6                                                            
CONECT   37    7                                                            
CONECT   38    7                                                            
CONECT   39    8                                                            
CONECT   40    8                                                            
CONECT   41    9                                                            
CONECT   42    9                                                            
CONECT   43   10                                                            
CONECT   44   11                                                            
CONECT   45   11                                                            
CONECT   46   12                                                            
CONECT   47   13                                                            
CONECT   48   14                                                            
CONECT   49   15                                                            
CONECT   50   16                                                            
CONECT   51   17                                                            
CONECT   52   18                                                            
CONECT   53   19                                                            
CONECT   54   20                                                            
CONECT   55   20                                                            
MASTER        0    0    0    0    0    0    0    0   55    0  110    0
END

RDKit          3D

55 55  0  0  0  0  0  0  0  0999 V2000
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    6.4457   -0.4664    2.6545 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2270   -1.5498    1.8038 H   0  0  0  0  0  0  0  0  0  0  0  0
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    3.8629    1.4406   -0.1094 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1058    0.3286   -0.7774 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9744   -1.6281    0.2106 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6982   -0.5543    0.8620 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4588   -0.8776   -2.1173 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0051   -1.6572   -1.3192 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6360    1.2922   -1.6958 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.5550    0.1664    1.5686 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4332    2.0453    0.7361 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8077    1.0723    1.2323 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1898    2.1609   -1.3812 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2612    0.2267   -2.4406 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7746    1.3125   -1.5681 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2079    3.3265   -0.8890 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7706    2.0129    1.4310 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5454   -0.1319    1.9108 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0795   -0.6465   -1.1420 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9611   -1.4851   -0.7657 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4674   -3.0018    0.2847 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4225   -2.1794   -0.8602 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
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 16 17  2  0
 17 18  1  0
 18 19  1  0
 18 20  1  0
 20 21  1  0
 21 22  2  0
 21 23  1  0
 23 10  1  0
  1 24  1  0
  1 25  1  0
  1 26  1  0
  2 27  1  0
  2 28  1  0
  3 29  1  0
  3 30  1  0
  4 31  1  0
  4 32  1  0
  5 33  1  0
  5 34  1  0
  6 35  1  0
  6 36  1  0
  7 37  1  0
  7 38  1  0
  8 39  1  0
  8 40  1  0
  9 41  1  0
  9 42  1  0
 10 43  1  1
 11 44  1  0
 11 45  1  0
 12 46  1  6
 13 47  1  0
 14 48  1  6
 15 49  1  0
 16 50  1  0
 17 51  1  0
 18 52  1  6
 19 53  1  0
 20 54  1  0
 20 55  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₁₈H₃₂O₅

Average Mass

328.4490 Da

Monoisotopic Mass

328.22497 Da

IUPAC Name

(4R,7R,8R,10S)-4,7,8-trihydroxy-10-nonyl-3,4,7,8,9,10-hexahydro-2H-oxecin-2-one

Traditional Name

(4R,7R,8R,10S)-4,7,8-trihydroxy-10-nonyl-3,4,7,8,9,10-hexahydrooxecin-2-one

CAS Registry Number

Not Available

SMILES

CCCCCCCCC[C@H]1C[C@@H](O)[C@H](O)\C=C/[C@H](O)CC(=O)O1

InChI Identifier

InChI=1S/C18H32O5/c1-2-3-4-5-6-7-8-9-15-13-17(21)16(20)11-10-14(19)12-18(22)23-15/h10-11,14-17,19-21H,2-9,12-13H2,1H3/b11-10-/t14-,15-,16+,17+/m0/s1

InChI Key

VKFBQLMPTJTKBZ-PONYRBOISA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Seimatosporium discosioides	NPAtlas	22424300

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.74	ALOGPS
logP	2.61	ChemAxon
logS	-2.8	ALOGPS
pKa (Strongest Acidic)	13.59	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	86.99 Å²	ChemAxon
Rotatable Bond Count	8	ChemAxon
Refractivity	89.77 m³·mol⁻¹	ChemAxon
Polarizability	36.95 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

Showing NP-Card for Seimatopolide A (NP0010701)

MOL for NP0010701 (Seimatopolide A)

3D MOL for NP0010701 (Seimatopolide A)

3D SDF for NP0010701 (Seimatopolide A)

3D-SDF for NP0010701 (Seimatopolide A)

PDB for NP0010701 (Seimatopolide A)

3D PDB for NP0010701 (Seimatopolide A)

SMILES for NP0010701 (Seimatopolide A)

INCHI for NP0010701 (Seimatopolide A)

Structure for NP0010701 (Seimatopolide A)

3D Structure for NP0010701 (Seimatopolide A)