NP-MRD: Showing NP-Card for Solonamide A (NP0010663)

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Record Information

Version

2.0

Created at

2021-01-05 20:06:24 UTC

Updated at

2021-07-15 17:06:44 UTC

NP-MRD ID

NP0010663

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Solonamide A

Provided By

NPAtlas

Description

Solonamide A is found in Photobacterium sp. Solonamide A was first documented in 2011 (PMID: 22363239). Based on a literature review very few articles have been published on Solanamide A.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652307012121333D          

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M  END

     RDKit          3D

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    3.5550    5.6243    1.1653 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6371    4.1762    1.5150 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9293    5.2143    0.0782 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2430    2.1922   -1.5069 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5010    3.3856   -0.0937 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7809    4.6257    1.7339 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1069    4.1010    1.5952 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8769    5.0517    0.1944 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9481    0.0507    1.9021 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5328    0.5533    1.1222 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -6.4993   -0.2507    0.1570 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  6  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  2  0
  9 17  1  0
 17 18  2  0
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 21 22  1  0
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 40  4  1  0
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  4 48  1  6
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 35 80  1  6
 36 81  1  0
 36 82  1  0
 36 83  1  0
 37 84  1  0
 37 85  1  0
 37 86  1  0
M  END


  Mrv1652307012121333D          

 86 87  0  0  0  0            999 V2000
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   -1.1805   -4.3815   -0.1062 C   0  0  1  0  0  0  0  0  0  0  0  0
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    0.5858   -2.0453   -2.2971 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8115   -1.2298   -0.5073 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.0734   -1.2451    0.9037 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5370   -1.2913    1.2495 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.2601   -2.4487    0.7504 C   0  0  0  0  0  0  0  0  0  0  0  0
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    5.5921   -3.4534   -1.0005 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.6918    1.8940    0.3514 C   0  0  2  0  0  0  0  0  0  0  0  0
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   -3.9250   -1.7225    1.7335 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0833   -1.9535   -0.4409 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0036   -3.6580    1.7602 H   0  0  0  0  0  0  0  0  0  0  0  0
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 40  4  1  0  0  0  0
 16 11  1  0  0  0  0
  1 41  1  0  0  0  0
  1 42  1  0  0  0  0
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  5 50  1  0  0  0  0
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  9 52  1  1  0  0  0
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 12 55  1  0  0  0  0
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 16 59  1  0  0  0  0
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 29 74  1  0  0  0  0
 29 75  1  0  0  0  0
 32 76  1  0  0  0  0
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 37 84  1  0  0  0  0
 37 85  1  0  0  0  0
 37 86  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0010663

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]N1C(=O)[C@]([H])(N([H])C(=O)[C@@]([H])(N([H])C(=O)C([H])([H])[C@]([H])(OC(=O)[C@@]([H])(N([H])C(=O)[C@@]1([H])C([H])([H])[H])C([H])([H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])C([H])([H])C([H])([H])[H])C([H])([H])C1=C([H])C([H])=C([H])C([H])=C1[H])C([H])([H])C([H])(C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C30H46N4O6/c1-7-11-22-17-26(35)32-24(16-21-12-9-8-10-13-21)29(38)33-23(14-18(2)3)28(37)31-20(6)27(36)34-25(15-19(4)5)30(39)40-22/h8-10,12-13,18-20,22-25H,7,11,14-17H2,1-6H3,(H,31,37)(H,32,35)(H,33,38)(H,34,36)/t20-,22-,23-,24+,25+/m1/s1

> <INCHI_KEY>
MORYTXVBPXJFDZ-HFDWIEFGSA-N

> <FORMULA>
C30H46N4O6

> <MOLECULAR_WEIGHT>
558.72

> <EXACT_MASS>
558.341735217

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
86

> <JCHEM_AVERAGE_POLARIZABILITY>
60.60986837449788

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(3S,6R,9R,12S,16R)-12-benzyl-6-methyl-3,9-bis(2-methylpropyl)-16-propyl-1-oxa-4,7,10,13-tetraazacyclohexadecane-2,5,8,11,14-pentone

> <ALOGPS_LOGP>
2.85

> <JCHEM_LOGP>
3.2630268763333325

> <ALOGPS_LOGS>
-4.29

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
11.247716761592738

> <JCHEM_PKA_STRONGEST_ACIDIC>
10.7290444886535

> <JCHEM_PKA_STRONGEST_BASIC>
-2.141152806437414

> <JCHEM_POLAR_SURFACE_AREA>
142.7

> <JCHEM_REFRACTIVITY>
150.25270000000003

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.89e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(3S,6R,9R,12S,16R)-12-benzyl-6-methyl-3,9-bis(2-methylpropyl)-16-propyl-1-oxa-4,7,10,13-tetraazacyclohexadecane-2,5,8,11,14-pentone

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 86 87  0  0  0  0  0  0  0  0999 V2000
   -2.2483   -4.3871    0.9532 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1805   -4.3815   -0.1062 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5777   -3.5956   -1.3121 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8647   -2.1398   -1.0627 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7346   -1.3605   -0.4940 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5836   -1.5606   -1.1390 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5858   -2.0453   -2.2971 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8115   -1.2298   -0.5073 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.0734   -1.2451    0.9037 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5370   -1.2913    1.2495 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2601   -2.4487    0.7504 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8916   -2.3677   -0.4729 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5921   -3.4534   -1.0005 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6559   -4.6316   -0.2868 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0276   -4.7344    0.9462 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3570   -3.6510    1.4201 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3327   -0.2566    1.7095 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7042   -0.6974    2.7535 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2051    1.1292    1.5090 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.6918    1.8940    0.3514 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5901    2.9644    0.8620 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2271    3.8858   -0.0918 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3839    4.7363   -0.9492 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1474    4.8008    0.7429 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7070    2.2168   -0.6534 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1908    2.2995   -1.8617 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6680    2.4618   -0.6208 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5260    3.0242    0.3834 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9983    4.3097    0.9801 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9773    2.0780    1.4264 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8741    2.5439    2.6340 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4815    0.7954    1.3127 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5779    0.2513    0.5755 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.7873    0.7603   -0.8074 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0204    0.0620   -1.4224 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.1658    0.6399   -2.8370 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2804    0.4527   -0.6783 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5204   -1.2591    0.6159 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9250   -1.7225    1.7335 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0833   -1.9535   -0.4409 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0036   -3.6580    1.7602 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2089   -4.1195    0.4803 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3055   -5.3901    1.4320 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2572   -4.0055    0.3784 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9590   -5.4439   -0.3641 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5601   -4.0195   -1.7001 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8618   -3.8063   -2.1083 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0107   -1.7163   -2.1195 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9380   -0.2549   -0.6393 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7121   -1.5202    0.5913 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5839   -0.9575   -1.1507 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6987   -2.2718    1.2523 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5846   -1.3232    2.3758 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0172   -0.3757    0.8524 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8929   -1.4904   -1.0841 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0970   -3.4224   -1.9550 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1785   -5.5101   -0.6342 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0736   -5.6525    1.5080 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8557   -3.6970    2.3778 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7203    1.7167    2.2588 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4366    1.1407   -0.0975 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4585    2.4144    1.3611 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1608    3.4937    1.7690 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9701    3.3588   -0.7740 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6160    4.5971   -2.0265 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2966    4.7475   -0.7196 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6807    5.8193   -0.7723 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5550    5.6243    1.1653 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6371    4.1762    1.5150 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9293    5.2143    0.0782 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2430    2.1922   -1.5069 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5010    3.3856   -0.0937 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7809    4.6257    1.7339 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1069    4.1010    1.5952 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8769    5.0517    0.1944 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9481    0.0507    1.9021 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5328    0.5533    1.1222 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1443    1.8218   -0.7215 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9712    0.6082   -1.5102 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9277   -1.0173   -1.4522 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9455    0.1007   -3.3959 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2096    0.7205   -3.3535 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5698    1.6795   -2.6725 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3008    1.5018   -0.3757 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1326    0.3136   -1.4046 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4993   -0.2507    0.1570 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  6  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  2  0
  9 17  1  0
 17 18  2  0
 17 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 22 24  1  0
 20 25  1  0
 25 26  2  0
 25 27  1  0
 27 28  1  0
 28 29  1  0
 28 30  1  0
 30 31  2  0
 30 32  1  0
 32 33  1  0
 33 34  1  0
 34 35  1  0
 35 36  1  0
 35 37  1  0
 33 38  1  0
 38 39  2  0
 38 40  1  0
 40  4  1  0
 16 11  1  0
  1 41  1  0
  1 42  1  0
  1 43  1  0
  2 44  1  0
  2 45  1  0
  3 46  1  0
  3 47  1  0
  4 48  1  6
  5 49  1  0
  5 50  1  0
  8 51  1  0
  9 52  1  1
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 12 55  1  0
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 20 61  1  6
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 22 64  1  6
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 24 68  1  0
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 27 71  1  0
 28 72  1  6
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 29 74  1  0
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 32 76  1  0
 33 77  1  1
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 34 79  1  0
 35 80  1  6
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 36 82  1  0
 36 83  1  0
 37 84  1  0
 37 85  1  0
 37 86  1  0
M  END

HEADER    PROTEIN                                 01-JUL-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   01-JUL-21         0                                  
HETATM    1  C   UNK     0      -2.248  -4.387   0.953  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.181  -4.381  -0.106  0.00  0.00           C+0
HETATM    3  C   UNK     0      -1.578  -3.596  -1.312  0.00  0.00           C+0
HETATM    4  C   UNK     0      -1.865  -2.140  -1.063  0.00  0.00           C+0
HETATM    5  C   UNK     0      -0.735  -1.361  -0.494  0.00  0.00           C+0
HETATM    6  C   UNK     0       0.584  -1.561  -1.139  0.00  0.00           C+0
HETATM    7  O   UNK     0       0.586  -2.045  -2.297  0.00  0.00           O+0
HETATM    8  N   UNK     0       1.812  -1.230  -0.507  0.00  0.00           N+0
HETATM    9  C   UNK     0       2.073  -1.245   0.904  0.00  0.00           C+0
HETATM   10  C   UNK     0       3.537  -1.291   1.250  0.00  0.00           C+0
HETATM   11  C   UNK     0       4.260  -2.449   0.750  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.892  -2.368  -0.473  0.00  0.00           C+0
HETATM   13  C   UNK     0       5.592  -3.453  -1.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.656  -4.632  -0.287  0.00  0.00           C+0
HETATM   15  C   UNK     0       5.028  -4.734   0.946  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.357  -3.651   1.420  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.333  -0.257   1.710  0.00  0.00           C+0
HETATM   18  O   UNK     0       0.704  -0.697   2.753  0.00  0.00           O+0
HETATM   19  N   UNK     0       1.205   1.129   1.509  0.00  0.00           N+0
HETATM   20  C   UNK     0       1.692   1.894   0.351  0.00  0.00           C+0
HETATM   21  C   UNK     0       2.590   2.964   0.862  0.00  0.00           C+0
HETATM   22  C   UNK     0       3.227   3.886  -0.092  0.00  0.00           C+0
HETATM   23  C   UNK     0       2.384   4.736  -0.949  0.00  0.00           C+0
HETATM   24  C   UNK     0       4.147   4.801   0.743  0.00  0.00           C+0
HETATM   25  C   UNK     0       0.707   2.217  -0.653  0.00  0.00           C+0
HETATM   26  O   UNK     0       1.191   2.300  -1.862  0.00  0.00           O+0
HETATM   27  N   UNK     0      -0.668   2.462  -0.621  0.00  0.00           N+0
HETATM   28  C   UNK     0      -1.526   3.024   0.383  0.00  0.00           C+0
HETATM   29  C   UNK     0      -0.998   4.310   0.980  0.00  0.00           C+0
HETATM   30  C   UNK     0      -1.977   2.078   1.426  0.00  0.00           C+0
HETATM   31  O   UNK     0      -1.874   2.544   2.634  0.00  0.00           O+0
HETATM   32  N   UNK     0      -2.482   0.795   1.313  0.00  0.00           N+0
HETATM   33  C   UNK     0      -3.578   0.251   0.576  0.00  0.00           C+0
HETATM   34  C   UNK     0      -3.787   0.760  -0.807  0.00  0.00           C+0
HETATM   35  C   UNK     0      -5.020   0.062  -1.422  0.00  0.00           C+0
HETATM   36  C   UNK     0      -5.166   0.640  -2.837  0.00  0.00           C+0
HETATM   37  C   UNK     0      -6.280   0.453  -0.678  0.00  0.00           C+0
HETATM   38  C   UNK     0      -3.520  -1.259   0.616  0.00  0.00           C+0
HETATM   39  O   UNK     0      -3.925  -1.722   1.734  0.00  0.00           O+0
HETATM   40  O   UNK     0      -3.083  -1.954  -0.441  0.00  0.00           O+0
HETATM   41  H   UNK     0      -2.004  -3.658   1.760  0.00  0.00           H+0
HETATM   42  H   UNK     0      -3.209  -4.120   0.480  0.00  0.00           H+0
HETATM   43  H   UNK     0      -2.305  -5.390   1.432  0.00  0.00           H+0
HETATM   44  H   UNK     0      -0.257  -4.005   0.378  0.00  0.00           H+0
HETATM   45  H   UNK     0      -0.959  -5.444  -0.364  0.00  0.00           H+0
HETATM   46  H   UNK     0      -2.560  -4.019  -1.700  0.00  0.00           H+0
HETATM   47  H   UNK     0      -0.862  -3.806  -2.108  0.00  0.00           H+0
HETATM   48  H   UNK     0      -2.011  -1.716  -2.119  0.00  0.00           H+0
HETATM   49  H   UNK     0      -0.938  -0.255  -0.639  0.00  0.00           H+0
HETATM   50  H   UNK     0      -0.712  -1.520   0.591  0.00  0.00           H+0
HETATM   51  H   UNK     0       2.584  -0.958  -1.151  0.00  0.00           H+0
HETATM   52  H   UNK     0       1.699  -2.272   1.252  0.00  0.00           H+0
HETATM   53  H   UNK     0       3.585  -1.323   2.376  0.00  0.00           H+0
HETATM   54  H   UNK     0       4.017  -0.376   0.852  0.00  0.00           H+0
HETATM   55  H   UNK     0       4.893  -1.490  -1.084  0.00  0.00           H+0
HETATM   56  H   UNK     0       6.097  -3.422  -1.955  0.00  0.00           H+0
HETATM   57  H   UNK     0       6.178  -5.510  -0.634  0.00  0.00           H+0
HETATM   58  H   UNK     0       5.074  -5.652   1.508  0.00  0.00           H+0
HETATM   59  H   UNK     0       3.856  -3.697   2.378  0.00  0.00           H+0
HETATM   60  H   UNK     0       0.720   1.717   2.259  0.00  0.00           H+0
HETATM   61  H   UNK     0       2.437   1.141  -0.098  0.00  0.00           H+0
HETATM   62  H   UNK     0       3.458   2.414   1.361  0.00  0.00           H+0
HETATM   63  H   UNK     0       2.161   3.494   1.769  0.00  0.00           H+0
HETATM   64  H   UNK     0       3.970   3.359  -0.774  0.00  0.00           H+0
HETATM   65  H   UNK     0       2.616   4.597  -2.026  0.00  0.00           H+0
HETATM   66  H   UNK     0       1.297   4.747  -0.720  0.00  0.00           H+0
HETATM   67  H   UNK     0       2.681   5.819  -0.772  0.00  0.00           H+0
HETATM   68  H   UNK     0       3.555   5.624   1.165  0.00  0.00           H+0
HETATM   69  H   UNK     0       4.637   4.176   1.515  0.00  0.00           H+0
HETATM   70  H   UNK     0       4.929   5.214   0.078  0.00  0.00           H+0
HETATM   71  H   UNK     0      -1.243   2.192  -1.507  0.00  0.00           H+0
HETATM   72  H   UNK     0      -2.501   3.386  -0.094  0.00  0.00           H+0
HETATM   73  H   UNK     0      -1.781   4.626   1.734  0.00  0.00           H+0
HETATM   74  H   UNK     0      -0.107   4.101   1.595  0.00  0.00           H+0
HETATM   75  H   UNK     0      -0.877   5.052   0.194  0.00  0.00           H+0
HETATM   76  H   UNK     0      -1.948   0.051   1.902  0.00  0.00           H+0
HETATM   77  H   UNK     0      -4.533   0.553   1.122  0.00  0.00           H+0
HETATM   78  H   UNK     0      -4.144   1.822  -0.722  0.00  0.00           H+0
HETATM   79  H   UNK     0      -2.971   0.608  -1.510  0.00  0.00           H+0
HETATM   80  H   UNK     0      -4.928  -1.017  -1.452  0.00  0.00           H+0
HETATM   81  H   UNK     0      -5.946   0.101  -3.396  0.00  0.00           H+0
HETATM   82  H   UNK     0      -4.210   0.721  -3.353  0.00  0.00           H+0
HETATM   83  H   UNK     0      -5.570   1.680  -2.672  0.00  0.00           H+0
HETATM   84  H   UNK     0      -6.301   1.502  -0.376  0.00  0.00           H+0
HETATM   85  H   UNK     0      -7.133   0.314  -1.405  0.00  0.00           H+0
HETATM   86  H   UNK     0      -6.499  -0.251   0.157  0.00  0.00           H+0
CONECT    1    2   41   42   43                                             
CONECT    2    1    3   44   45                                             
CONECT    3    2    4   46   47                                             
CONECT    4    3    5   40   48                                             
CONECT    5    4    6   49   50                                             
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9   51                                                  
CONECT    9    8   10   17   52                                             
CONECT   10    9   11   53   54                                             
CONECT   11   10   12   16                                                  
CONECT   12   11   13   55                                                  
CONECT   13   12   14   56                                                  
CONECT   14   13   15   57                                                  
CONECT   15   14   16   58                                                  
CONECT   16   15   11   59                                                  
CONECT   17    9   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   20   60                                                  
CONECT   20   19   21   25   61                                             
CONECT   21   20   22   62   63                                             
CONECT   22   21   23   24   64                                             
CONECT   23   22   65   66   67                                             
CONECT   24   22   68   69   70                                             
CONECT   25   20   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28   71                                                  
CONECT   28   27   29   30   72                                             
CONECT   29   28   73   74   75                                             
CONECT   30   28   31   32                                                  
CONECT   31   30                                                            
CONECT   32   30   33   76                                                  
CONECT   33   32   34   38   77                                             
CONECT   34   33   35   78   79                                             
CONECT   35   34   36   37   80                                             
CONECT   36   35   81   82   83                                             
CONECT   37   35   84   85   86                                             
CONECT   38   33   39   40                                                  
CONECT   39   38                                                            
CONECT   40   38    4                                                       
CONECT   41    1                                                            
CONECT   42    1                                                            
CONECT   43    1                                                            
CONECT   44    2                                                            
CONECT   45    2                                                            
CONECT   46    3                                                            
CONECT   47    3                                                            
CONECT   48    4                                                            
CONECT   49    5                                                            
CONECT   50    5                                                            
CONECT   51    8                                                            
CONECT   52    9                                                            
CONECT   53   10                                                            
CONECT   54   10                                                            
CONECT   55   12                                                            
CONECT   56   13                                                            
CONECT   57   14                                                            
CONECT   58   15                                                            
CONECT   59   16                                                            
CONECT   60   19                                                            
CONECT   61   20                                                            
CONECT   62   21                                                            
CONECT   63   21                                                            
CONECT   64   22                                                            
CONECT   65   23                                                            
CONECT   66   23                                                            
CONECT   67   23                                                            
CONECT   68   24                                                            
CONECT   69   24                                                            
CONECT   70   24                                                            
CONECT   71   27                                                            
CONECT   72   28                                                            
CONECT   73   29                                                            
CONECT   74   29                                                            
CONECT   75   29                                                            
CONECT   76   32                                                            
CONECT   77   33                                                            
CONECT   78   34                                                            
CONECT   79   34                                                            
CONECT   80   35                                                            
CONECT   81   36                                                            
CONECT   82   36                                                            
CONECT   83   36                                                            
CONECT   84   37                                                            
CONECT   85   37                                                            
CONECT   86   37                                                            
MASTER        0    0    0    0    0    0    0    0   86    0  174    0
END

RDKit          3D

86 87  0  0  0  0  0  0  0  0999 V2000
   -2.2483   -4.3871    0.9532 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1805   -4.3815   -0.1062 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.7346   -1.3605   -0.4940 C   0  0  0  0  0  0  0  0  0  0  0  0
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    3.5370   -1.2913    1.2495 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2601   -2.4487    0.7504 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8916   -2.3677   -0.4729 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5921   -3.4534   -1.0005 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6559   -4.6316   -0.2868 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0276   -4.7344    0.9462 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.3327   -0.2566    1.7095 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7042   -0.6974    2.7535 O   0  0  0  0  0  0  0  0  0  0  0  0
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    2.4366    1.1407   -0.0975 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4585    2.4144    1.3611 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1608    3.4937    1.7690 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9701    3.3588   -0.7740 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6160    4.5971   -2.0265 H   0  0  0  0  0  0  0  0  0  0  0  0
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    3.5550    5.6243    1.1653 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6371    4.1762    1.5150 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9293    5.2143    0.0782 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2430    2.1922   -1.5069 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5010    3.3856   -0.0937 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7809    4.6257    1.7339 H   0  0  0  0  0  0  0  0  0  0  0  0
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  2  3  1  0
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 37 86  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₃₀H₄₆N₄O₆

Average Mass

558.7200 Da

Monoisotopic Mass

558.34174 Da

IUPAC Name

(3S,6R,9R,12S,16R)-12-benzyl-6-methyl-3,9-bis(2-methylpropyl)-16-propyl-1-oxa-4,7,10,13-tetraazacyclohexadecane-2,5,8,11,14-pentone

Traditional Name

(3S,6R,9R,12S,16R)-12-benzyl-6-methyl-3,9-bis(2-methylpropyl)-16-propyl-1-oxa-4,7,10,13-tetraazacyclohexadecane-2,5,8,11,14-pentone

CAS Registry Number

Not Available

SMILES

CCC[C@@H]1CC(=O)N[C@@H](CC2=CC=CC=C2)C(=O)N[C@H](CC(C)C)C(=O)N[C@H](C)C(=O)N[C@@H](CC(C)C)C(=O)O1

InChI Identifier

InChI=1S/C30H46N4O6/c1-7-11-22-17-26(35)32-24(16-21-12-9-8-10-13-21)29(38)33-23(14-18(2)3)28(37)31-20(6)27(36)34-25(15-19(4)5)30(39)40-22/h8-10,12-13,18-20,22-25H,7,11,14-17H2,1-6H3,(H,31,37)(H,32,35)(H,33,38)(H,34,36)/t20-,22-,23-,24+,25+/m1/s1

InChI Key

MORYTXVBPXJFDZ-HFDWIEFGSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Photobacterium sp.	NPAtlas	22363239

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.85	ALOGPS
logP	3.26	ChemAxon
logS	-4.3	ALOGPS
pKa (Strongest Acidic)	10.73	ChemAxon
pKa (Strongest Basic)	-2.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	142.7 Å²	ChemAxon
Rotatable Bond Count	8	ChemAxon
Refractivity	150.25 m³·mol⁻¹	ChemAxon
Polarizability	60.61 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA010297

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

28185138

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

122203641

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Mansson M, Nielsen A, Kjaerulff L, Gotfredsen CH, Wietz M, Ingmer H, Gram L, Larsen TO: Inhibition of virulence gene expression in Staphylococcus aureus by novel depsipeptides from a marine photobacterium. Mar Drugs. 2011 Dec;9(12):2537-52. doi: 10.3390/md9122537. Epub 2011 Dec 7. [PubMed:22363239 ]

Showing NP-Card for Solonamide A (NP0010663)

MOL for NP0010663 (Solonamide A)

3D MOL for NP0010663 (Solonamide A)

3D SDF for NP0010663 (Solonamide A)

3D-SDF for NP0010663 (Solonamide A)

PDB for NP0010663 (Solonamide A)

3D PDB for NP0010663 (Solonamide A)

SMILES for NP0010663 (Solonamide A)

INCHI for NP0010663 (Solonamide A)

Structure for NP0010663 (Solonamide A)

3D Structure for NP0010663 (Solonamide A)