Np mrd loader

Record Information
Version2.0
Created at2021-01-05 19:50:00 UTC
Updated at2021-07-15 17:05:34 UTC
NP-MRD IDNP0010248
Secondary Accession NumbersNone
Natural Product Identification
Common NameGonytolide A
Provided ByNPAtlasNPAtlas Logo
Description Gonytolide A is found in Gonytrichum sp. Gonytolide A was first documented in 2011 (PMID: 21827134). Based on a literature review a small amount of articles have been published on Gonytolide A (PMID: 29658717) (PMID: 24953777) (PMID: 27082979).
Structure
Data?1621576284
SynonymsNot Available
Chemical FormulaC32H30O14
Average Mass638.5780 Da
Monoisotopic Mass638.16356 Da
IUPAC Namemethyl (2R)-5-hydroxy-8-[(2R)-5-hydroxy-2-(methoxycarbonyl)-7-methyl-4-oxo-2-[(2S)-5-oxooxolan-2-yl]-3,4-dihydro-2H-1-benzopyran-8-yl]-7-methyl-4-oxo-2-[(2S)-5-oxooxolan-2-yl]-3,4-dihydro-2H-1-benzopyran-2-carboxylate
Traditional Namemethyl (2R)-5-hydroxy-8-[(2R)-5-hydroxy-2-(methoxycarbonyl)-7-methyl-4-oxo-2-[(2S)-5-oxooxolan-2-yl]-3H-1-benzopyran-8-yl]-7-methyl-4-oxo-2-[(2S)-5-oxooxolan-2-yl]-3H-1-benzopyran-2-carboxylate
CAS Registry NumberNot Available
SMILES
COC(=O)[C@@]1(CC(=O)C2=C(O)C=C(C)C(=C2O1)C1=C2O[C@](CC(=O)C2=C(O)C=C1C)([C@@H]1CCC(=O)O1)C(=O)OC)[C@@H]1CCC(=O)O1
InChI Identifier
InChI=1S/C32H30O14/c1-13-9-15(33)25-17(35)11-31(29(39)41-3,19-5-7-21(37)43-19)45-27(25)23(13)24-14(2)10-16(34)26-18(36)12-32(30(40)42-4,46-28(24)26)20-6-8-22(38)44-20/h9-10,19-20,33-34H,5-8,11-12H2,1-4H3/t19-,20-,31+,32+/m0/s1
InChI KeyJENKJIXLVFFCGZ-PYTHCZBLSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Gonytrichum sp.NPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.92ALOGPS
logP3.92ChemAxon
logS-4ALOGPS
pKa (Strongest Acidic)8.26ChemAxon
pKa (Strongest Basic)-4.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area198.26 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity152.4 m³·mol⁻¹ChemAxon
Polarizability61.29 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA002734
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID34443111
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound54590710
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Kikuchi H, Isobe M, Sekiya M, Abe Y, Hoshikawa T, Ueda K, Kurata S, Katou Y, Oshima Y: Structures of the dimeric and monomeric chromanones, gonytolides A-C, isolated from the fungus Gonytrichum sp. and their promoting activities of innate immune responses. Org Lett. 2011 Sep 2;13(17):4624-7. doi: 10.1021/ol2018449. Epub 2011 Aug 9. [PubMed:21827134 ]
  2. Wu X, Iwata T, Scharf A, Qin T, Reichl KD, Porco JA Jr: Asymmetric Synthesis of Gonytolide A: Strategic Use of an Aryl Halide Blocking Group for Oxidative Coupling. J Am Chem Soc. 2018 May 9;140(18):5969-5975. doi: 10.1021/jacs.8b02535. Epub 2018 Apr 25. [PubMed:29658717 ]
  3. Sudhakar G, Bayya S, Kadam VD, Nanubolu JB: Total synthesis of gonytolides C and G, lachnone C, and formal synthesis of blennolide C and diversonol. Org Biomol Chem. 2014 Aug 14;12(30):5601-10. doi: 10.1039/c4ob00950a. Epub 2014 Jun 23. [PubMed:24953777 ]
  4. Kikuchi H, Hoshikawa T, Kurata S, Katou Y, Oshima Y: Design and Synthesis of Structure-Simplified Derivatives of Gonytolide for the Promotion of Innate Immune Responses. J Nat Prod. 2016 May 27;79(5):1259-66. doi: 10.1021/acs.jnatprod.5b00829. Epub 2016 Apr 15. [PubMed:27082979 ]