NP-MRD: Showing NP-Card for Veraguamide G (NP0009881)

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Record Information

Version

2.0

Created at

2021-01-05 19:35:25 UTC

Updated at

2021-07-15 17:04:31 UTC

NP-MRD ID

NP0009881

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Veraguamide G

Provided By

NPAtlas

Description

(3S,6R,7S,10S,13S,16S,21aS)-16-[(2S)-butan-2-yl]-8-hydroxy-2,7,12-trimethyl-6-(pent-4-en-1-yl)-3,10,13-tris(propan-2-yl)-1H,2H,3H,4H,6H,7H,10H,11H,12H,13H,14H,16H,17H,19H,20H,21H,21aH-pyrrolo[2,1-f]1,10-dioxa-4,7,13,16-tetraazacyclononadecane-1,4,11,14,17-pentone belongs to the class of organic compounds known as cyclic depsipeptides. These are natural or synthetic compounds having sequences of amino and hydroxy carboxylic acid residues (usually α-amino and α-hydroxy acids) connected in a ring. The residues are commonly but not necessarily regularly alternating. Veraguamide G is found in Symploca and Symploca hydnoides. Based on a literature review very few articles have been published on (3S,6R,7S,10S,13S,16S,21aS)-16-[(2S)-butan-2-yl]-8-hydroxy-2,7,12-trimethyl-6-(pent-4-en-1-yl)-3,10,13-tris(propan-2-yl)-1H,2H,3H,4H,6H,7H,10H,11H,12H,13H,14H,16H,17H,19H,20H,21H,21aH-pyrrolo[2,1-f]1,10-dioxa-4,7,13,16-tetraazacyclononadecane-1,4,11,14,17-pentone.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652307012120353D          

111112  0  0  0  0            999 V2000
    6.6892    1.5637    3.5450 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4307    0.5966    2.6857 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0593    0.9072    1.3088 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.6614    0.3638    0.9588 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.4122    0.7446   -0.4520 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0697    0.3183   -1.0133 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.9091   -0.9941   -0.9916 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2711   -2.1199   -0.7864 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3504   -2.4927   -1.5685 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5371   -3.0354    0.3162 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.6481   -4.0388    0.0317 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.9723   -3.3097   -0.2387 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4074   -4.9000   -1.1590 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4533   -3.5795    1.0825 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.9937   -4.3429    2.2797 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0616   -3.5283    0.9606 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4860   -2.9351    1.9838 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9261   -3.9692   -0.0042 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.4368   -5.1267   -0.8727 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9241   -4.7606   -2.2256 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.1311   -3.8913   -1.9558 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.6156   -3.0378   -0.8337 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8306   -1.6692   -0.7459 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3474   -0.9895   -1.7443 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5173   -0.8458    0.2860 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.9707   -1.2397    0.4788 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.6941   -1.0578   -0.8336 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1717   -2.5966    1.0640 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.6740   -2.8753    1.2221 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3876    0.4930    0.0221 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7988    1.5685   -0.5463 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2901    1.6686   -1.7270 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7559    2.9194    0.1232 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.9443    3.2113    0.9702 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.9899    2.1673    2.0989 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2669    3.0509    0.2472 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5299    3.9942   -0.8156 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5798    4.9382   -1.1655 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2707    4.1959   -1.4530 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2844    4.6343   -2.6281 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0528    3.9271   -0.8339 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7386    5.2723   -0.5795 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2106    6.0183    0.3693 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8340    6.1182   -1.8118 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7747    3.1082   -1.7762 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.1930    1.7773   -1.6107 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8758    0.9439   -2.5333 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9670    1.2052   -0.4916 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0494    0.5300    0.4609 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6388    2.6174    3.2725 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9668    1.3604    4.5727 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4978   -0.4251    3.0146 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7616    0.4666    0.5602 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0057    1.9929    1.0924 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9159    0.7536    1.6721 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7738   -0.7341    1.0612 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1813    0.2556   -1.0980 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4758    1.8497   -0.5416 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1840    0.6207   -2.1123 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0679   -2.3542    1.1058 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7958   -4.6956    0.9046 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6266   -3.9361   -0.8904 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7114   -2.4264   -0.8481 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4656   -2.9818    0.6737 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9333   -5.8819   -0.9091 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4104   -5.2016   -1.5792 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8923   -4.3873   -2.0039 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9615   -3.9514    2.5915 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1323   -5.4048    1.9990 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3183   -4.1895    3.1474 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8030   -4.4974    0.5476 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8656   -6.1114   -0.5650 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6382   -5.2380   -0.8118 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1880   -4.3244   -2.8954 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3236   -5.6885   -2.7340 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3245   -3.3432   -2.8668 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0067   -4.4598   -1.6586 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0580   -0.9806    1.3157 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4113   -0.5232    1.1892 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9712   -1.0681   -1.6725 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2350   -0.0779   -0.8849 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4283   -1.8808   -1.0251 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7119   -2.7426    2.0368 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8359   -3.3466    0.2952 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2399   -1.9288    1.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0400   -3.6498    0.5494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9203   -3.1197    2.2816 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8625    2.9540    0.8113 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8649    4.1952    1.4683 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8815    2.6560    3.0940 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1760    1.4266    1.9766 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9414    1.6096    2.1183 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9637    2.4365    0.8834 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2029    2.5425   -0.7136 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7377    4.0394    0.1596 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8661    5.4316   -0.2138 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1836    5.7739   -1.8147 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3999    4.5108   -1.7421 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0158    3.4525    0.1413 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7141    5.1142   -0.0726 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3282    6.8469    0.8640 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0134    6.4625   -0.2833 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6211    5.3093    1.0849 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4644    7.0067   -1.5256 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1776    6.5807   -2.0025 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2449    5.6056   -2.6852 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9963    3.6020   -2.6990 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4762    2.0295    0.0872 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5045    0.3995    1.4690 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1742    1.1804    0.6351 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6360   -0.4325    0.0755 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 10 14  1  0  0  0  0
 14 15  1  0  0  0  0
 14 16  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 23 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 26 28  1  0  0  0  0
 28 29  1  0  0  0  0
 25 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  2  0  0  0  0
 31 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 34 36  1  0  0  0  0
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 37 38  1  0  0  0  0
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 22 18  1  0  0  0  0
  1 50  1  0  0  0  0
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  2 52  1  0  0  0  0
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 18 71  1  1  0  0  0
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 49110  1  0  0  0  0
 49111  1  0  0  0  0
M  END

     RDKit          3D

111112  0  0  0  0  0  0  0  0999 V2000
    6.6892    1.5637    3.5450 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4307    0.5966    2.6857 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0593    0.9072    1.3088 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6614    0.3638    0.9588 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4122    0.7446   -0.4520 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0697    0.3183   -1.0133 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.9091   -0.9941   -0.9916 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2711   -2.1199   -0.7864 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3504   -2.4927   -1.5685 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5371   -3.0354    0.3162 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.6481   -4.0388    0.0317 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.9723   -3.3097   -0.2387 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4074   -4.9000   -1.1590 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4533   -3.5795    1.0825 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.9937   -4.3429    2.2797 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0616   -3.5283    0.9606 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4860   -2.9351    1.9838 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9261   -3.9692   -0.0042 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.4368   -5.1267   -0.8727 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9241   -4.7606   -2.2256 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1311   -3.8913   -1.9558 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6156   -3.0378   -0.8337 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8306   -1.6692   -0.7459 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652307012120353D          

111112  0  0  0  0            999 V2000
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    0.1742    1.1804    0.6351 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6360   -0.4325    0.0755 H   0  0  0  0  0  0  0  0  0  0  0  0
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 49110  1  0  0  0  0
 49111  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0009881

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]C([H])=C([H])C([H])([H])C([H])([H])C([H])([H])[C@@]1([H])OC(=O)[C@@]([H])(N(C(=O)[C@@]2([H])N(C(=O)[C@@]([H])(OC(=O)[C@@]([H])(N(C(=O)[C@@]([H])(N([H])C(=O)[C@@]1([H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H])[C@@]([H])(C([H])([H])[H])C([H])([H])C([H])([H])[H])C([H])([H])C([H])([H])C2([H])[H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C37H62N4O8/c1-13-15-16-19-27-25(10)32(42)38-28(21(3)4)34(44)40(12)30(23(7)8)37(47)49-31(24(9)14-2)35(45)41-20-17-18-26(41)33(43)39(11)29(22(5)6)36(46)48-27/h13,21-31H,1,14-20H2,2-12H3,(H,38,42)/t24-,25-,26-,27+,28-,29-,30-,31-/m0/s1

> <INCHI_KEY>
DUFQJKUNMNJPAD-AVCHBABLSA-N

> <FORMULA>
C37H62N4O8

> <MOLECULAR_WEIGHT>
690.923

> <EXACT_MASS>
690.456764972

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
111

> <JCHEM_AVERAGE_POLARIZABILITY>
76.48780714106476

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(3S,6R,7S,10S,13S,16S,21aS)-16-[(2S)-butan-2-yl]-2,7,12-trimethyl-6-(pent-4-en-1-yl)-3,10,13-tris(propan-2-yl)-octadecahydro-1H-pyrrolo[2,1-f]1,10-dioxa-4,7,13,16-tetraazacyclononadecane-1,4,8,11,14,17-hexone

> <ALOGPS_LOGP>
4.12

> <JCHEM_LOGP>
5.133824683999998

> <ALOGPS_LOGS>
-5.00

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
18.70236001571896

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.617809655444749

> <JCHEM_PKA_STRONGEST_BASIC>
-1.0963225420194052

> <JCHEM_POLAR_SURFACE_AREA>
142.63

> <JCHEM_REFRACTIVITY>
185.5206000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
6.98e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(3S,6R,7S,10S,13S,16S,21aS)-16-[(2S)-butan-2-yl]-3,10,13-triisopropyl-2,7,12-trimethyl-6-(pent-4-en-1-yl)-decahydro-3H-pyrrolo[2,1-f]1,10-dioxa-4,7,13,16-tetraazacyclononadecane-1,4,8,11,14,17-hexone

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

111112  0  0  0  0  0  0  0  0999 V2000
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    3.6481   -4.0388    0.0317 C   0  0  2  0  0  0  0  0  0  0  0  0
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    0.7747    3.1082   -1.7762 N   0  0  0  0  0  0  0  0  0  0  0  0
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    0.8758    0.9439   -2.5333 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9670    1.2052   -0.4916 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0494    0.5300    0.4609 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6388    2.6174    3.2725 H   0  0  0  0  0  0  0  0  0  0  0  0
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    6.4978   -0.4251    3.0146 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7616    0.4666    0.5602 H   0  0  0  0  0  0  0  0  0  0  0  0
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    2.9333   -5.8819   -0.9091 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.7119   -2.7426    2.0368 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8359   -3.3466    0.2952 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2399   -1.9288    1.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0400   -3.6498    0.5494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9203   -3.1197    2.2816 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8625    2.9540    0.8113 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8649    4.1952    1.4683 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8815    2.6560    3.0940 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1760    1.4266    1.9766 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9414    1.6096    2.1183 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9637    2.4365    0.8834 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2029    2.5425   -0.7136 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7377    4.0394    0.1596 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8661    5.4316   -0.2138 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1836    5.7739   -1.8147 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3999    4.5108   -1.7421 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0158    3.4525    0.1413 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7141    5.1142   -0.0726 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3282    6.8469    0.8640 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0134    6.4625   -0.2833 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6211    5.3093    1.0849 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4644    7.0067   -1.5256 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1776    6.5807   -2.0025 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2449    5.6056   -2.6852 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9963    3.6020   -2.6990 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4762    2.0295    0.0872 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5045    0.3995    1.4690 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1742    1.1804    0.6351 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6360   -0.4325    0.0755 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  2  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 11 13  1  0
 10 14  1  0
 14 15  1  0
 14 16  1  0
 16 17  2  0
 16 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  2  0
 23 25  1  0
 25 26  1  0
 26 27  1  0
 26 28  1  0
 28 29  1  0
 25 30  1  0
 30 31  1  0
 31 32  2  0
 31 33  1  0
 33 34  1  0
 34 35  1  0
 34 36  1  0
 33 37  1  0
 37 38  1  0
 37 39  1  0
 39 40  2  0
 39 41  1  0
 41 42  1  0
 42 43  1  0
 42 44  1  0
 41 45  1  0
 45 46  1  0
 46 47  2  0
 46 48  1  0
 48 49  1  0
 48  6  1  0
 22 18  1  0
  1 50  1  0
  1 51  1  0
  2 52  1  0
  3 53  1  0
  3 54  1  0
  4 55  1  0
  4 56  1  0
  5 57  1  0
  5 58  1  0
  6 59  1  6
 10 60  1  1
 11 61  1  1
 12 62  1  0
 12 63  1  0
 12 64  1  0
 13 65  1  0
 13 66  1  0
 13 67  1  0
 15 68  1  0
 15 69  1  0
 15 70  1  0
 18 71  1  1
 19 72  1  0
 19 73  1  0
 20 74  1  0
 20 75  1  0
 21 76  1  0
 21 77  1  0
 25 78  1  1
 26 79  1  1
 27 80  1  0
 27 81  1  0
 27 82  1  0
 28 83  1  0
 28 84  1  0
 29 85  1  0
 29 86  1  0
 29 87  1  0
 33 88  1  1
 34 89  1  1
 35 90  1  0
 35 91  1  0
 35 92  1  0
 36 93  1  0
 36 94  1  0
 36 95  1  0
 38 96  1  0
 38 97  1  0
 38 98  1  0
 41 99  1  1
 42100  1  1
 43101  1  0
 43102  1  0
 43103  1  0
 44104  1  0
 44105  1  0
 44106  1  0
 45107  1  0
 48108  1  1
 49109  1  0
 49110  1  0
 49111  1  0
M  END

HEADER    PROTEIN                                 01-JUL-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   01-JUL-21         0                                  
HETATM    1  C   UNK     0       6.689   1.564   3.545  0.00  0.00           C+0
HETATM    2  C   UNK     0       6.431   0.597   2.686  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.059   0.907   1.309  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.661   0.364   0.959  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.412   0.745  -0.452  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.070   0.318  -1.013  0.00  0.00           C+0
HETATM    7  O   UNK     0       2.909  -0.994  -0.992  0.00  0.00           O+0
HETATM    8  C   UNK     0       2.271  -2.120  -0.786  0.00  0.00           C+0
HETATM    9  O   UNK     0       1.350  -2.493  -1.569  0.00  0.00           O+0
HETATM   10  C   UNK     0       2.537  -3.035   0.316  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.648  -4.039   0.032  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.972  -3.310  -0.239  0.00  0.00           C+0
HETATM   13  C   UNK     0       3.407  -4.900  -1.159  0.00  0.00           C+0
HETATM   14  N   UNK     0       1.453  -3.579   1.083  0.00  0.00           N+0
HETATM   15  C   UNK     0       1.994  -4.343   2.280  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.062  -3.528   0.961  0.00  0.00           C+0
HETATM   17  O   UNK     0      -0.486  -2.935   1.984  0.00  0.00           O+0
HETATM   18  C   UNK     0      -0.926  -3.969  -0.004  0.00  0.00           C+0
HETATM   19  C   UNK     0      -0.437  -5.127  -0.873  0.00  0.00           C+0
HETATM   20  C   UNK     0      -0.924  -4.761  -2.226  0.00  0.00           C+0
HETATM   21  C   UNK     0      -2.131  -3.891  -1.956  0.00  0.00           C+0
HETATM   22  N   UNK     0      -1.616  -3.038  -0.834  0.00  0.00           N+0
HETATM   23  C   UNK     0      -1.831  -1.669  -0.746  0.00  0.00           C+0
HETATM   24  O   UNK     0      -1.347  -0.990  -1.744  0.00  0.00           O+0
HETATM   25  C   UNK     0      -2.517  -0.846   0.286  0.00  0.00           C+0
HETATM   26  C   UNK     0      -3.971  -1.240   0.479  0.00  0.00           C+0
HETATM   27  C   UNK     0      -4.694  -1.058  -0.834  0.00  0.00           C+0
HETATM   28  C   UNK     0      -4.172  -2.597   1.064  0.00  0.00           C+0
HETATM   29  C   UNK     0      -5.674  -2.875   1.222  0.00  0.00           C+0
HETATM   30  O   UNK     0      -2.388   0.493   0.022  0.00  0.00           O+0
HETATM   31  C   UNK     0      -2.799   1.569  -0.546  0.00  0.00           C+0
HETATM   32  O   UNK     0      -3.290   1.669  -1.727  0.00  0.00           O+0
HETATM   33  C   UNK     0      -2.756   2.919   0.123  0.00  0.00           C+0
HETATM   34  C   UNK     0      -3.944   3.211   0.970  0.00  0.00           C+0
HETATM   35  C   UNK     0      -3.990   2.167   2.099  0.00  0.00           C+0
HETATM   36  C   UNK     0      -5.267   3.051   0.247  0.00  0.00           C+0
HETATM   37  N   UNK     0      -2.530   3.994  -0.816  0.00  0.00           N+0
HETATM   38  C   UNK     0      -3.580   4.938  -1.165  0.00  0.00           C+0
HETATM   39  C   UNK     0      -1.271   4.196  -1.453  0.00  0.00           C+0
HETATM   40  O   UNK     0      -1.284   4.634  -2.628  0.00  0.00           O+0
HETATM   41  C   UNK     0       0.053   3.927  -0.834  0.00  0.00           C+0
HETATM   42  C   UNK     0       0.739   5.272  -0.580  0.00  0.00           C+0
HETATM   43  C   UNK     0      -0.211   6.018   0.369  0.00  0.00           C+0
HETATM   44  C   UNK     0       0.834   6.118  -1.812  0.00  0.00           C+0
HETATM   45  N   UNK     0       0.775   3.108  -1.776  0.00  0.00           N+0
HETATM   46  C   UNK     0       1.193   1.777  -1.611  0.00  0.00           C+0
HETATM   47  O   UNK     0       0.876   0.944  -2.533  0.00  0.00           O+0
HETATM   48  C   UNK     0       1.967   1.205  -0.492  0.00  0.00           C+0
HETATM   49  C   UNK     0       1.049   0.530   0.461  0.00  0.00           C+0
HETATM   50  H   UNK     0       6.639   2.617   3.272  0.00  0.00           H+0
HETATM   51  H   UNK     0       6.967   1.360   4.573  0.00  0.00           H+0
HETATM   52  H   UNK     0       6.498  -0.425   3.015  0.00  0.00           H+0
HETATM   53  H   UNK     0       6.762   0.467   0.560  0.00  0.00           H+0
HETATM   54  H   UNK     0       6.006   1.993   1.092  0.00  0.00           H+0
HETATM   55  H   UNK     0       3.916   0.754   1.672  0.00  0.00           H+0
HETATM   56  H   UNK     0       4.774  -0.734   1.061  0.00  0.00           H+0
HETATM   57  H   UNK     0       5.181   0.256  -1.098  0.00  0.00           H+0
HETATM   58  H   UNK     0       4.476   1.850  -0.542  0.00  0.00           H+0
HETATM   59  H   UNK     0       3.184   0.621  -2.112  0.00  0.00           H+0
HETATM   60  H   UNK     0       3.068  -2.354   1.106  0.00  0.00           H+0
HETATM   61  H   UNK     0       3.796  -4.696   0.905  0.00  0.00           H+0
HETATM   62  H   UNK     0       5.627  -3.936  -0.890  0.00  0.00           H+0
HETATM   63  H   UNK     0       4.711  -2.426  -0.848  0.00  0.00           H+0
HETATM   64  H   UNK     0       5.466  -2.982   0.674  0.00  0.00           H+0
HETATM   65  H   UNK     0       2.933  -5.882  -0.909  0.00  0.00           H+0
HETATM   66  H   UNK     0       4.410  -5.202  -1.579  0.00  0.00           H+0
HETATM   67  H   UNK     0       2.892  -4.387  -2.004  0.00  0.00           H+0
HETATM   68  H   UNK     0       2.962  -3.951   2.591  0.00  0.00           H+0
HETATM   69  H   UNK     0       2.132  -5.405   1.999  0.00  0.00           H+0
HETATM   70  H   UNK     0       1.318  -4.189   3.147  0.00  0.00           H+0
HETATM   71  H   UNK     0      -1.803  -4.497   0.548  0.00  0.00           H+0
HETATM   72  H   UNK     0      -0.866  -6.111  -0.565  0.00  0.00           H+0
HETATM   73  H   UNK     0       0.638  -5.238  -0.812  0.00  0.00           H+0
HETATM   74  H   UNK     0      -0.188  -4.324  -2.895  0.00  0.00           H+0
HETATM   75  H   UNK     0      -1.324  -5.689  -2.734  0.00  0.00           H+0
HETATM   76  H   UNK     0      -2.325  -3.343  -2.867  0.00  0.00           H+0
HETATM   77  H   UNK     0      -3.007  -4.460  -1.659  0.00  0.00           H+0
HETATM   78  H   UNK     0      -2.058  -0.981   1.316  0.00  0.00           H+0
HETATM   79  H   UNK     0      -4.411  -0.523   1.189  0.00  0.00           H+0
HETATM   80  H   UNK     0      -3.971  -1.068  -1.673  0.00  0.00           H+0
HETATM   81  H   UNK     0      -5.235  -0.078  -0.885  0.00  0.00           H+0
HETATM   82  H   UNK     0      -5.428  -1.881  -1.025  0.00  0.00           H+0
HETATM   83  H   UNK     0      -3.712  -2.743   2.037  0.00  0.00           H+0
HETATM   84  H   UNK     0      -3.836  -3.347   0.295  0.00  0.00           H+0
HETATM   85  H   UNK     0      -6.240  -1.929   1.000  0.00  0.00           H+0
HETATM   86  H   UNK     0      -6.040  -3.650   0.549  0.00  0.00           H+0
HETATM   87  H   UNK     0      -5.920  -3.120   2.282  0.00  0.00           H+0
HETATM   88  H   UNK     0      -1.863   2.954   0.811  0.00  0.00           H+0
HETATM   89  H   UNK     0      -3.865   4.195   1.468  0.00  0.00           H+0
HETATM   90  H   UNK     0      -3.882   2.656   3.094  0.00  0.00           H+0
HETATM   91  H   UNK     0      -3.176   1.427   1.977  0.00  0.00           H+0
HETATM   92  H   UNK     0      -4.941   1.610   2.118  0.00  0.00           H+0
HETATM   93  H   UNK     0      -5.964   2.437   0.883  0.00  0.00           H+0
HETATM   94  H   UNK     0      -5.203   2.543  -0.714  0.00  0.00           H+0
HETATM   95  H   UNK     0      -5.738   4.039   0.160  0.00  0.00           H+0
HETATM   96  H   UNK     0      -3.866   5.432  -0.214  0.00  0.00           H+0
HETATM   97  H   UNK     0      -3.184   5.774  -1.815  0.00  0.00           H+0
HETATM   98  H   UNK     0      -4.400   4.511  -1.742  0.00  0.00           H+0
HETATM   99  H   UNK     0      -0.016   3.453   0.141  0.00  0.00           H+0
HETATM  100  H   UNK     0       1.714   5.114  -0.073  0.00  0.00           H+0
HETATM  101  H   UNK     0       0.328   6.847   0.864  0.00  0.00           H+0
HETATM  102  H   UNK     0      -1.013   6.463  -0.283  0.00  0.00           H+0
HETATM  103  H   UNK     0      -0.621   5.309   1.085  0.00  0.00           H+0
HETATM  104  H   UNK     0       1.464   7.007  -1.526  0.00  0.00           H+0
HETATM  105  H   UNK     0      -0.178   6.581  -2.002  0.00  0.00           H+0
HETATM  106  H   UNK     0       1.245   5.606  -2.685  0.00  0.00           H+0
HETATM  107  H   UNK     0       0.996   3.602  -2.699  0.00  0.00           H+0
HETATM  108  H   UNK     0       2.476   2.030   0.087  0.00  0.00           H+0
HETATM  109  H   UNK     0       1.504   0.400   1.469  0.00  0.00           H+0
HETATM  110  H   UNK     0       0.174   1.180   0.635  0.00  0.00           H+0
HETATM  111  H   UNK     0       0.636  -0.433   0.076  0.00  0.00           H+0
CONECT    1    2   50   51                                                  
CONECT    2    1    3   52                                                  
CONECT    3    2    4   53   54                                             
CONECT    4    3    5   55   56                                             
CONECT    5    4    6   57   58                                             
CONECT    6    5    7   48   59                                             
CONECT    7    6    8                                                       
CONECT    8    7    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8   11   14   60                                             
CONECT   11   10   12   13   61                                             
CONECT   12   11   62   63   64                                             
CONECT   13   11   65   66   67                                             
CONECT   14   10   15   16                                                  
CONECT   15   14   68   69   70                                             
CONECT   16   14   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19   22   71                                             
CONECT   19   18   20   72   73                                             
CONECT   20   19   21   74   75                                             
CONECT   21   20   22   76   77                                             
CONECT   22   21   23   18                                                  
CONECT   23   22   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   26   30   78                                             
CONECT   26   25   27   28   79                                             
CONECT   27   26   80   81   82                                             
CONECT   28   26   29   83   84                                             
CONECT   29   28   85   86   87                                             
CONECT   30   25   31                                                       
CONECT   31   30   32   33                                                  
CONECT   32   31                                                            
CONECT   33   31   34   37   88                                             
CONECT   34   33   35   36   89                                             
CONECT   35   34   90   91   92                                             
CONECT   36   34   93   94   95                                             
CONECT   37   33   38   39                                                  
CONECT   38   37   96   97   98                                             
CONECT   39   37   40   41                                                  
CONECT   40   39                                                            
CONECT   41   39   42   45   99                                             
CONECT   42   41   43   44  100                                             
CONECT   43   42  101  102  103                                             
CONECT   44   42  104  105  106                                             
CONECT   45   41   46  107                                                  
CONECT   46   45   47   48                                                  
CONECT   47   46                                                            
CONECT   48   46   49    6  108                                             
CONECT   49   48  109  110  111                                             
CONECT   50    1                                                            
CONECT   51    1                                                            
CONECT   52    2                                                            
CONECT   53    3                                                            
CONECT   54    3                                                            
CONECT   55    4                                                            
CONECT   56    4                                                            
CONECT   57    5                                                            
CONECT   58    5                                                            
CONECT   59    6                                                            
CONECT   60   10                                                            
CONECT   61   11                                                            
CONECT   62   12                                                            
CONECT   63   12                                                            
CONECT   64   12                                                            
CONECT   65   13                                                            
CONECT   66   13                                                            
CONECT   67   13                                                            
CONECT   68   15                                                            
CONECT   69   15                                                            
CONECT   70   15                                                            
CONECT   71   18                                                            
CONECT   72   19                                                            
CONECT   73   19                                                            
CONECT   74   20                                                            
CONECT   75   20                                                            
CONECT   76   21                                                            
CONECT   77   21                                                            
CONECT   78   25                                                            
CONECT   79   26                                                            
CONECT   80   27                                                            
CONECT   81   27                                                            
CONECT   82   27                                                            
CONECT   83   28                                                            
CONECT   84   28                                                            
CONECT   85   29                                                            
CONECT   86   29                                                            
CONECT   87   29                                                            
CONECT   88   33                                                            
CONECT   89   34                                                            
CONECT   90   35                                                            
CONECT   91   35                                                            
CONECT   92   35                                                            
CONECT   93   36                                                            
CONECT   94   36                                                            
CONECT   95   36                                                            
CONECT   96   38                                                            
CONECT   97   38                                                            
CONECT   98   38                                                            
CONECT   99   41                                                            
CONECT  100   42                                                            
CONECT  101   43                                                            
CONECT  102   43                                                            
CONECT  103   43                                                            
CONECT  104   44                                                            
CONECT  105   44                                                            
CONECT  106   44                                                            
CONECT  107   45                                                            
CONECT  108   48                                                            
CONECT  109   49                                                            
CONECT  110   49                                                            
CONECT  111   49                                                            
MASTER        0    0    0    0    0    0    0    0  111    0  224    0
END

RDKit          3D

111112  0  0  0  0  0  0  0  0999 V2000
    6.6892    1.5637    3.5450 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4307    0.5966    2.6857 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0593    0.9072    1.3088 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6614    0.3638    0.9588 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4122    0.7446   -0.4520 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0697    0.3183   -1.0133 C   0  0  1  0  0  0  0  0  0  0  0  0
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  1  2  2  3
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M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₃₇H₆₂N₄O₈

Average Mass

690.9230 Da

Monoisotopic Mass

690.45676 Da

IUPAC Name

(3S,6R,7S,10S,13S,16S,21aS)-16-[(2S)-butan-2-yl]-2,7,12-trimethyl-6-(pent-4-en-1-yl)-3,10,13-tris(propan-2-yl)-octadecahydro-1H-pyrrolo[2,1-f]1,10-dioxa-4,7,13,16-tetraazacyclononadecane-1,4,8,11,14,17-hexone

Traditional Name

(3S,6R,7S,10S,13S,16S,21aS)-16-[(2S)-butan-2-yl]-3,10,13-triisopropyl-2,7,12-trimethyl-6-(pent-4-en-1-yl)-decahydro-3H-pyrrolo[2,1-f]1,10-dioxa-4,7,13,16-tetraazacyclononadecane-1,4,8,11,14,17-hexone

CAS Registry Number

Not Available

SMILES

CC[C@H](C)[C@@H]1OC(=O)[C@H](C(C)C)N(C)C(=O)[C@@H](NC(=O)[C@@H](C)[C@@H](CCCC=C)OC(=O)[C@H](C(C)C)N(C)C(=O)[C@@H]2CCCN2C1=O)C(C)C

InChI Identifier

InChI=1S/C37H62N4O8/c1-13-15-16-19-27-25(10)32(42)38-28(21(3)4)34(44)40(12)30(23(7)8)37(47)49-31(24(9)14-2)35(45)41-20-17-18-26(41)33(43)39(11)29(22(5)6)36(46)48-27/h13,21-31H,1,14-20H2,2-12H3,(H,38,42)/t24-,25-,26-,27+,28-,29-,30-,31-/m0/s1

InChI Key

DUFQJKUNMNJPAD-AVCHBABLSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Symploca	NPAtlas	21446699
Symploca hydnoides	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as cyclic depsipeptides. These are natural or synthetic compounds having sequences of amino and hydroxy carboxylic acid residues (usually α-amino and α-hydroxy acids) connected in a ring. The residues are commonly but not necessarily regularly alternating.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Peptidomimetics

Sub Class

Depsipeptides

Direct Parent

Cyclic depsipeptides

Alternative Parents

Substituents

Cyclic depsipeptide
Macrolide lactam
Alpha-amino acid ester
Macrolactam
Macrolide
Alpha-amino acid or derivatives
Dicarboxylic acid or derivatives
Pyrrolidine
Tertiary carboxylic acid amide
Carboxamide group
Carboxylic acid ester
Lactam
Lactone
Secondary carboxylic acid amide
Oxacycle
Carboxylic acid derivative
Azacycle
Organoheterocyclic compound
Hydrocarbon derivative
Carbonyl group
Organic oxygen compound
Organic oxide
Organopnictogen compound
Organic nitrogen compound
Organonitrogen compound
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

cyclodepsipeptide (CHEBI:67336 )

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.12	ALOGPS
logP	5.13	ChemAxon
logS	-5	ALOGPS
pKa (Strongest Acidic)	12.62	ChemAxon
pKa (Strongest Basic)	-1.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	142.63 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	185.52 m³·mol⁻¹	ChemAxon
Polarizability	76.49 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA008221

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

26333570

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for Veraguamide G (NP0009881)

MOL for NP0009881 (Veraguamide G)

3D MOL for NP0009881 (Veraguamide G)

3D SDF for NP0009881 (Veraguamide G)

3D-SDF for NP0009881 (Veraguamide G)

PDB for NP0009881 (Veraguamide G)

3D PDB for NP0009881 (Veraguamide G)

SMILES for NP0009881 (Veraguamide G)

INCHI for NP0009881 (Veraguamide G)

Structure for NP0009881 (Veraguamide G)

3D Structure for NP0009881 (Veraguamide G)