Record Information |
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Version | 2.0 |
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Created at | 2021-01-05 19:23:32 UTC |
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Updated at | 2021-07-15 17:04:18 UTC |
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NP-MRD ID | NP0009802 |
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Secondary Accession Numbers | None |
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Natural Product Identification |
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Common Name | Nikkomycin WX |
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Provided By | NPAtlas |
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Description | (2R)-2-{[(2S)-2-amino-1-hydroxy-3-(4-hydroxyphenyl)propylidene]amino}-2-[(2R,3R,4R,5R)-5-(4-formyl-2-hydroxy-1H-imidazol-1-yl)-3,4-dihydroxyoxolan-2-yl]acetic acid belongs to the class of organic compounds known as peptides. Peptides are compounds containing an amide derived from two or more amino carboxylic acid molecules (the same or different) by formation of a covalent bond from the carbonyl carbon of one to the nitrogen atom of another. Nikkomycin WX is found in Streptomyces and Streptomyces tendae. Nikkomycin WX was first documented in 1990 (PMID: 2137814). Based on a literature review very few articles have been published on (2R)-2-{[(2S)-2-amino-1-hydroxy-3-(4-hydroxyphenyl)propylidene]amino}-2-[(2R,3R,4R,5R)-5-(4-formyl-2-hydroxy-1H-imidazol-1-yl)-3,4-dihydroxyoxolan-2-yl]acetic acid. |
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Structure | [H]OC(=O)[C@]([H])(N([H])C(=O)[C@@]([H])(N([H])[H])C([H])([H])C1=C([H])C([H])=C(O[H])C([H])=C1[H])[C@@]1([H])O[C@@]([H])(N2C([H])=C(N([H])C2=O)C([H])=O)[C@]([H])(O[H])[C@@]1([H])O[H] InChI=1S/C19H22N4O9/c20-11(5-8-1-3-10(25)4-2-8)16(28)22-12(18(29)30)15-13(26)14(27)17(32-15)23-6-9(7-24)21-19(23)31/h1-4,6-7,11-15,17,25-27H,5,20H2,(H,21,31)(H,22,28)(H,29,30)/t11-,12+,13+,14+,15+,17+/m0/s1 |
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Synonyms | Value | Source |
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(2R)-2-{[(2S)-2-amino-1-hydroxy-3-(4-hydroxyphenyl)propylidene]amino}-2-[(2R,3R,4R,5R)-5-(4-formyl-2-hydroxy-1H-imidazol-1-yl)-3,4-dihydroxyoxolan-2-yl]acetate | Generator |
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Chemical Formula | C19H22N4O9 |
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Average Mass | 450.4040 Da |
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Monoisotopic Mass | 450.13868 Da |
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IUPAC Name | (2R)-2-[(2S)-2-amino-3-(4-hydroxyphenyl)propanamido]-2-[(2R,3R,4R,5R)-5-(4-formyl-2-oxo-2,3-dihydro-1H-imidazol-1-yl)-3,4-dihydroxyoxolan-2-yl]acetic acid |
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Traditional Name | (R)-[(2S)-2-amino-3-(4-hydroxyphenyl)propanamido][(2R,3R,4R,5R)-5-(4-formyl-2-oxo-3H-imidazol-1-yl)-3,4-dihydroxyoxolan-2-yl]acetic acid |
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CAS Registry Number | Not Available |
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SMILES | N[C@@H](CC1=CC=C(O)C=C1)C(=O)N[C@H]([C@H]1O[C@H]([C@H](O)[C@H]1O)N1C=C(NC1=O)C=O)C(O)=O |
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InChI Identifier | InChI=1S/C19H22N4O9/c20-11(5-8-1-3-10(25)4-2-8)16(28)22-12(18(29)30)15-13(26)14(27)17(32-15)23-6-9(7-24)21-19(23)31/h1-4,6-7,11-15,17,25-27H,5,20H2,(H,21,31)(H,22,28)(H,29,30)/t11-,12+,13+,14+,15+,17+/m0/s1 |
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InChI Key | AEDRUJHNHSLWIZ-WTUOYXTGSA-N |
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Experimental Spectra |
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| Not Available | Predicted Spectra |
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| Spectrum Type | Description | Depositor ID | Depositor Organization | Depositor | Deposition Date | View |
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1D NMR | 13C NMR Spectrum (1D, 25 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 252 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 50 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 75 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 101 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 126 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 151 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 176 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 201 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 226 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum |
| Chemical Shift Submissions |
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| Not Available | Species |
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Species of Origin | |
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Species Where Detected | |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as peptides. Peptides are compounds containing an amide derived from two or more amino carboxylic acid molecules (the same or different) by formation of a covalent bond from the carbonyl carbon of one to the nitrogen atom of another. |
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Kingdom | Organic compounds |
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Super Class | Organic acids and derivatives |
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Class | Carboxylic acids and derivatives |
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Sub Class | Amino acids, peptides, and analogues |
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Direct Parent | Peptides |
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Alternative Parents | |
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Substituents | - Alpha peptide
- N-acyl-alpha amino acid or derivatives
- N-acyl-alpha-amino acid
- N-glycosyl compound
- Glycosyl compound
- Amphetamine or derivatives
- Alpha-amino acid or derivatives
- Trisubstituted imidazole
- Imidazolyl carboxylic acid derivative
- 1,2,4-trisubstituted-imidazole
- 1-hydroxy-2-unsubstituted benzenoid
- Aralkylamine
- Aryl-aldehyde
- Phenol
- Imidazole-4-carbonyl group
- Benzenoid
- N-substituted imidazole
- Monocyclic benzene moiety
- Heteroaromatic compound
- Vinylogous amide
- Tetrahydrofuran
- Imidazole
- Azole
- Amino acid
- Secondary alcohol
- Amino acid or derivatives
- 1,2-diol
- Oxacycle
- Azacycle
- Organoheterocyclic compound
- Organic 1,3-dipolar compound
- Propargyl-type 1,3-dipolar organic compound
- Monocarboxylic acid or derivatives
- Carboxylic acid
- Carboximidic acid derivative
- Carboximidic acid
- Organic nitrogen compound
- Organic oxygen compound
- Organopnictogen compound
- Organic oxide
- Hydrocarbon derivative
- Primary amine
- Organooxygen compound
- Organonitrogen compound
- Primary aliphatic amine
- Carbonyl group
- Amine
- Aldehyde
- Alcohol
- Aromatic heteromonocyclic compound
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Molecular Framework | Aromatic heteromonocyclic compounds |
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External Descriptors | Not Available |
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Physical Properties |
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State | Not Available |
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Experimental Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Predicted Properties | |
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