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Record Information
Version2.0
Created at2021-01-05 19:19:15 UTC
Updated at2021-07-15 17:04:09 UTC
NP-MRD IDNP0009750
Secondary Accession NumbersNone
Natural Product Identification
Common NameTubiferic acid
Provided ByNPAtlasNPAtlas Logo
Description Tubiferic acid is found in Tubifera ferruginosa and Tubulifera. Tubiferic acid was first documented in 2011 (PMID: 21297312). Based on a literature review very few articles have been published on (24E)-3beta,22,23-Trihydroxy-19-nor-B(9a)-homolanosta-5(10),9(11),24-triene-26-oic acid.
Structure
Data?1621576131
Synonyms
ValueSource
(24E)-3b,22,23-Trihydroxy-19-nor-b(9a)-homolanosta-5(10),9(11),24-triene-26-OateGenerator
(24E)-3b,22,23-Trihydroxy-19-nor-b(9a)-homolanosta-5(10),9(11),24-triene-26-Oic acidGenerator
(24E)-3beta,22,23-Trihydroxy-19-nor-b(9a)-homolanosta-5(10),9(11),24-triene-26-OateGenerator
(24E)-3Β,22,23-trihydroxy-19-nor-b(9a)-homolanosta-5(10),9(11),24-triene-26-OateGenerator
(24E)-3Β,22,23-trihydroxy-19-nor-b(9a)-homolanosta-5(10),9(11),24-triene-26-Oic acidGenerator
(2E,6S)-4,5-Dihydroxy-6-[(6S,11R,12S,15R,16R)-6-hydroxy-7,7,12,16-tetramethyltetracyclo[9.7.0.0,.0,]octadeca-1(18),3(8)-dien-15-yl]-2-methylhept-2-enoateGenerator
Chemical FormulaC30H46O5
Average Mass486.6930 Da
Monoisotopic Mass486.33452 Da
IUPAC Name(2E,4S,5S,6S)-4,5-dihydroxy-6-[(6S,11R,12S,15R,16R)-6-hydroxy-7,7,12,16-tetramethyltetracyclo[9.7.0.0^{3,8}.0^{12,16}]octadeca-1(18),3(8)-dien-15-yl]-2-methylhept-2-enoic acid
Traditional Name(2E,4S,5S,6S)-4,5-dihydroxy-6-[(6S,11R,12S,15R,16R)-6-hydroxy-7,7,12,16-tetramethyltetracyclo[9.7.0.0^{3,8}.0^{12,16}]octadeca-1(18),3(8)-dien-15-yl]-2-methylhept-2-enoic acid
CAS Registry NumberNot Available
SMILES
C[C@H](C(O)C(O)\C=C(/C)C(O)=O)[C@H]1CC[C@@]2(C)[C@@H]3CCC4=C(CC[C@H](O)C4(C)C)CC3=CC[C@]12C
InChI Identifier
InChI=1S/C30H46O5/c1-17(27(34)35)15-24(31)26(33)18(2)21-12-14-30(6)23-9-8-22-19(7-10-25(32)28(22,3)4)16-20(23)11-13-29(21,30)5/h11,15,18,21,23-26,31-33H,7-10,12-14,16H2,1-6H3,(H,34,35)/b17-15+/t18-,21+,23+,24?,25-,26?,29+,30-/m0/s1
InChI KeyAMZGQXOKWNUNMC-YOSMAUEVSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Tubifera ferruginosaLOTUS Database
TubuliferaNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.41ALOGPS
logP4.41ChemAxon
logS-5ALOGPS
pKa (Strongest Acidic)4.54ChemAxon
pKa (Strongest Basic)-0.88ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area97.99 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity140.04 m³·mol⁻¹ChemAxon
Polarizability57.16 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA002120
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78436494
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound101496093
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Ippongi Y, Ohtsuki T, Toume K, Arai MA, Yamamoto Y, Ishibashi M: Tubiferic acid, a new 9,10-secocycloartane triterpenoid acid isolated from the myxomycete Tubulifera arachnoidea. Chem Pharm Bull (Tokyo). 2011;59(2):279-81. doi: 10.1248/cpb.59.279. [PubMed:21297312 ]