Np mrd loader

Record Information
Version1.0
Created at2020-12-09 06:45:04 UTC
Updated at2021-07-15 17:02:59 UTC
NP-MRD IDNP0009341
Secondary Accession NumbersNone
Natural Product Identification
Common NameEpothilone N
Provided ByNPAtlasNPAtlas Logo
Description Epothilone N is found in Sorangium cellulosum. It was first documented in 2010 (PMID: 20606695). Based on a literature review very few articles have been published on (4S,7R,8S,9S,13S,14S,16R,17E)-13-chloro-4,8,14,16-tetrahydroxy-5,5,7,9-tetramethyl-17-[(2-methyl-1,3-thiazol-4-yl)methylidene]-1-oxacyclooctadecane-2,6-dione (PMID: 33795638) (PMID: 32065746) (PMID: 31309998) (PMID: 30841526).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC26H40ClNO7S
Average Mass546.1200 Da
Monoisotopic Mass545.22140 Da
IUPAC Name(4S,7R,8S,9S,13S,14S,16R,17E)-13-chloro-4,8,14,16-tetrahydroxy-5,5,7,9-tetramethyl-17-[(2-methyl-1,3-thiazol-4-yl)methylidene]-1-oxacyclooctadecane-2,6-dione
Traditional Name(4S,7R,8S,9S,13S,14S,16R,17E)-13-chloro-4,8,14,16-tetrahydroxy-5,5,7,9-tetramethyl-17-[(2-methyl-1,3-thiazol-4-yl)methylidene]-1-oxacyclooctadecane-2,6-dione
CAS Registry NumberNot Available
SMILES
C[C@H]1CCC[C@H](Cl)[C@@H](O)C[C@@H](O)\C(COC(=O)C[C@H](O)C(C)(C)C(=O)[C@H](C)[C@H]1O)=C\C1=CSC(C)=N1
InChI Identifier
InChI=1S/C26H40ClNO7S/c1-14-7-6-8-19(27)21(30)10-20(29)17(9-18-13-36-16(3)28-18)12-35-23(32)11-22(31)26(4,5)25(34)15(2)24(14)33/h9,13-15,19-22,24,29-31,33H,6-8,10-12H2,1-5H3/b17-9+/t14-,15+,19-,20+,21-,22-,24-/m0/s1
InChI KeyJTOSCZWCJBMIDL-LNHNXMDESA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Sorangium cellulosumNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP2.46ALOGPS
logP2.75ChemAxon
logS-4.9ALOGPS
pKa (Strongest Acidic)13.67ChemAxon
pKa (Strongest Basic)2.72ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area137.18 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity138.46 m³·mol⁻¹ChemAxon
Polarizability58.44 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA008090
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78437214
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound49780983
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Lu C, Liu X, Li Y, Shen Y: Two 18-membered epothilones from Sorangium cellulosum So0157-2. J Antibiot (Tokyo). 2010 Sep;63(9):571-4. doi: 10.1038/ja.2010.81. Epub 2010 Jul 7. [PubMed:20606695 ]
  2. Li F, Huang T, Tang Y, Li Q, Wang J, Cheng X, Zhang W, Zhang B, Zhou C, Tu S: Utidelone inhibits growth of colorectal cancer cells through ROS/JNK signaling pathway. Cell Death Dis. 2021 Apr 1;12(4):338. doi: 10.1038/s41419-021-03619-6. [PubMed:33795638 ]
  3. Nicolaou KC, Shelke YG, Dherange BD, Kempema A, Lin B, Gu C, Sandoval J, Hammond M, Aujay M, Gavrilyuk J: Design, Synthesis, and Biological Investigation of Epothilone B Analogues Featuring Lactone, Lactam, and Carbocyclic Macrocycles, Epoxide, Aziridine, and 1,1-Difluorocyclopropane and Other Fluorine Residues. J Org Chem. 2020 Mar 6;85(5):2865-2917. doi: 10.1021/acs.joc.0c00123. Epub 2020 Feb 17. [PubMed:32065746 ]
  4. Martinez JW, Sanchez-Naranjo JC, Londono-De Los Rios PA, Isaza-Mejia CA, Sosa-Urrea JD, Martinez-Munoz MA, Lopez-Osorio JJ, Marin-Medina DS, Machado-Duque ME, Machado-Alba JE: Prevalence of peripheral neuropathy associated with chemotherapy in four oncology centers of Colombia. Rev Neurol. 2019 Aug 1;69(3):94-98. doi: 10.33588/rn.6903.2019035. [PubMed:31309998 ]
  5. Gaugaz FZ, Chicca A, Redondo-Horcajo M, Barasoain I, Diaz JF, Altmann KH: Synthesis, Microtubule-Binding Affinity, and Antiproliferative Activity of New Epothilone Analogs and of an EGFR-Targeted Epothilone-Peptide Conjugate. Int J Mol Sci. 2019 Mar 5;20(5). pii: ijms20051113. doi: 10.3390/ijms20051113. [PubMed:30841526 ]