NP-MRD: Showing NP-Card for Aqabamycin C (NP0009182)

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Record Information

Version

2.0

Created at

2020-12-09 06:36:42 UTC

Updated at

2021-07-15 17:02:32 UTC

NP-MRD ID

NP0009182

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Aqabamycin C

Provided By

NPAtlas

Description

Aqabamycin C is found in Vibrio sp. Aqabamycin C was first documented in 2010 (PMID: 20431617). Based on a literature review very few articles have been published on 5-hydroxy-3-(4-hydroxy-3-nitrophenyl)-4-phenyl-2H-pyrrol-2-one.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242106333D          

 33 35  0  0  0  0            999 V2000
    3.1070   -2.8203   -1.1130 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8949   -2.5556   -0.9070 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9165   -3.5676   -1.1465 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3130   -2.9746   -0.8251 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4679   -3.5122   -0.8877 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0442   -1.5849   -0.3918 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1250   -0.6711   -0.0233 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7807   -0.9279    1.1600 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8543   -0.2141    1.6178 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2957    0.8256    0.8269 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3797    1.5790    1.2446 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6719    1.1364   -0.3841 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1686    2.2136   -1.1434 N   0  3  0  0  0  4  0  0  0  0  0  0
   -3.0263    2.2411   -2.3881 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8136    3.2344   -0.4966 O   0  5  0  0  0  1  0  0  0  0  0  0
   -1.5870    0.3642   -0.7737 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2275   -1.3305   -0.4339 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9789   -0.1272   -0.0915 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4472    0.9865    0.4898 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2119    2.1097    0.7837 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5660    2.1406    0.4933 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1282    1.0439   -0.0863 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3481   -0.0660   -0.3705 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1127   -4.5615   -1.5028 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4455   -1.7517    1.7792 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3605   -0.4113    2.5602 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8404    1.3479    2.1112 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1310    0.6390   -1.7217 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4208    1.0300    0.7737 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7365    2.9523    1.2319 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1379    3.0351    0.7338 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1736    1.0788   -0.3070 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8973   -0.8818   -0.8120 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 12 16  2  0  0  0  0
  6 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 17  2  1  0  0  0  0
 23 18  1  0  0  0  0
 16  7  1  0  0  0  0
  3 24  1  0  0  0  0
  8 25  1  0  0  0  0
  9 26  1  0  0  0  0
 11 27  1  0  0  0  0
 16 28  1  0  0  0  0
 19 29  1  0  0  0  0
 20 30  1  0  0  0  0
 21 31  1  0  0  0  0
 22 32  1  0  0  0  0
 23 33  1  0  0  0  0
M  CHG  2  13   1  15  -1
M  END

     RDKit          3D

 33 35  0  0  0  0  0  0  0  0999 V2000
    3.1070   -2.8203   -1.1130 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8949   -2.5556   -0.9070 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9165   -3.5676   -1.1465 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3130   -2.9746   -0.8251 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4679   -3.5122   -0.8877 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0442   -1.5849   -0.3918 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1250   -0.6711   -0.0233 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7807   -0.9279    1.1600 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8543   -0.2141    1.6178 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2957    0.8256    0.8269 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3797    1.5790    1.2446 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6719    1.1364   -0.3841 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1686    2.2136   -1.1434 N   0  0  0  0  0  4  0  0  0  0  0  0
   -3.0263    2.2411   -2.3881 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8136    3.2344   -0.4966 O   0  0  0  0  0  1  0  0  0  0  0  0
   -1.5870    0.3642   -0.7737 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2275   -1.3305   -0.4339 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9789   -0.1272   -0.0915 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4472    0.9865    0.4898 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2119    2.1097    0.7837 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5660    2.1406    0.4933 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1282    1.0439   -0.0863 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3481   -0.0660   -0.3705 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1127   -4.5615   -1.5028 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4455   -1.7517    1.7792 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3605   -0.4113    2.5602 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8404    1.3479    2.1112 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1310    0.6390   -1.7217 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4208    1.0300    0.7737 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7365    2.9523    1.2319 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1379    3.0351    0.7338 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1736    1.0788   -0.3070 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8973   -0.8818   -0.8120 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  1  0
  4  5  2  0
  4  6  1  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 10 12  1  0
 12 13  1  0
 13 14  2  0
 13 15  1  0
 12 16  2  0
  6 17  2  0
 17 18  1  0
 18 19  2  0
 19 20  1  0
 20 21  2  0
 21 22  1  0
 22 23  2  0
 17  2  1  0
 23 18  1  0
 16  7  1  0
  3 24  1  0
  8 25  1  0
  9 26  1  0
 11 27  1  0
 16 28  1  0
 19 29  1  0
 20 30  1  0
 21 31  1  0
 22 32  1  0
 23 33  1  0
M  CHG  2  13   1  15  -1
M  END


  Mrv1652306242106333D          

 33 35  0  0  0  0            999 V2000
    3.1070   -2.8203   -1.1130 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8949   -2.5556   -0.9070 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9165   -3.5676   -1.1465 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3130   -2.9746   -0.8251 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4679   -3.5122   -0.8877 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0442   -1.5849   -0.3918 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1250   -0.6711   -0.0233 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7807   -0.9279    1.1600 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8543   -0.2141    1.6178 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2957    0.8256    0.8269 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3797    1.5790    1.2446 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6719    1.1364   -0.3841 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1686    2.2136   -1.1434 N   0  3  0  0  0  4  0  0  0  0  0  0
   -3.0263    2.2411   -2.3881 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8136    3.2344   -0.4966 O   0  5  0  0  0  1  0  0  0  0  0  0
   -1.5870    0.3642   -0.7737 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2275   -1.3305   -0.4339 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9789   -0.1272   -0.0915 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4472    0.9865    0.4898 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2119    2.1097    0.7837 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5660    2.1406    0.4933 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1282    1.0439   -0.0863 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3481   -0.0660   -0.3705 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1127   -4.5615   -1.5028 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4455   -1.7517    1.7792 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3605   -0.4113    2.5602 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8404    1.3479    2.1112 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1310    0.6390   -1.7217 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4208    1.0300    0.7737 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7365    2.9523    1.2319 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1379    3.0351    0.7338 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1736    1.0788   -0.3070 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8973   -0.8818   -0.8120 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 12 16  2  0  0  0  0
  6 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 17  2  1  0  0  0  0
 23 18  1  0  0  0  0
 16  7  1  0  0  0  0
  3 24  1  0  0  0  0
  8 25  1  0  0  0  0
  9 26  1  0  0  0  0
 11 27  1  0  0  0  0
 16 28  1  0  0  0  0
 19 29  1  0  0  0  0
 20 30  1  0  0  0  0
 21 31  1  0  0  0  0
 22 32  1  0  0  0  0
 23 33  1  0  0  0  0
M  CHG  2  13   1  15  -1
M  END
> <DATABASE_ID>
NP0009182

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC1=C([H])C([H])=C(C([H])=C1[N+]([O-])=O)C1=C(C(=O)N([H])C1=O)C1=C([H])C([H])=C([H])C([H])=C1[H]

> <INCHI_IDENTIFIER>
InChI=1S/C16H10N2O5/c19-12-7-6-10(8-11(12)18(22)23)14-13(15(20)17-16(14)21)9-4-2-1-3-5-9/h1-8,19H,(H,17,20,21)

> <INCHI_KEY>
PWZWHCDOYSVJMU-UHFFFAOYSA-N

> <FORMULA>
C16H10N2O5

> <MOLECULAR_WEIGHT>
310.265

> <EXACT_MASS>
310.05897143

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
33

> <JCHEM_AVERAGE_POLARIZABILITY>
29.71992414279672

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
{[5-(2,5-dioxo-4-phenyl-2,5-dihydro-1H-pyrrol-3-yl)-2-hydroxyphenyl]nitro}-lambda1-oxidanyl

> <ALOGPS_LOGP>
2.14

> <JCHEM_LOGP>
2.336691533333333

> <ALOGPS_LOGS>
-4.28

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
9.727940219712815

> <JCHEM_PKA_STRONGEST_ACIDIC>
6.121349637693559

> <JCHEM_PKA_STRONGEST_BASIC>
-4.7816568797718535

> <JCHEM_POLAR_SURFACE_AREA>
109.54000000000002

> <JCHEM_REFRACTIVITY>
80.55700000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.62e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
[5-(2,5-dioxo-4-phenyl-1H-pyrrol-3-yl)-2-hydroxyphenylnitro]-lambda1-oxidanyl

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 33 35  0  0  0  0  0  0  0  0999 V2000
    3.1070   -2.8203   -1.1130 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8949   -2.5556   -0.9070 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9165   -3.5676   -1.1465 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3130   -2.9746   -0.8251 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4679   -3.5122   -0.8877 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0442   -1.5849   -0.3918 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1250   -0.6711   -0.0233 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7807   -0.9279    1.1600 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8543   -0.2141    1.6178 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2957    0.8256    0.8269 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3797    1.5790    1.2446 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6719    1.1364   -0.3841 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1686    2.2136   -1.1434 N   0  0  0  0  0  4  0  0  0  0  0  0
   -3.0263    2.2411   -2.3881 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8136    3.2344   -0.4966 O   0  0  0  0  0  1  0  0  0  0  0  0
   -1.5870    0.3642   -0.7737 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2275   -1.3305   -0.4339 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9789   -0.1272   -0.0915 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4472    0.9865    0.4898 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2119    2.1097    0.7837 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5660    2.1406    0.4933 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1282    1.0439   -0.0863 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3481   -0.0660   -0.3705 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1127   -4.5615   -1.5028 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4455   -1.7517    1.7792 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3605   -0.4113    2.5602 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8404    1.3479    2.1112 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1310    0.6390   -1.7217 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4208    1.0300    0.7737 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7365    2.9523    1.2319 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1379    3.0351    0.7338 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1736    1.0788   -0.3070 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8973   -0.8818   -0.8120 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  1  0
  4  5  2  0
  4  6  1  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 10 12  1  0
 12 13  1  0
 13 14  2  0
 13 15  1  0
 12 16  2  0
  6 17  2  0
 17 18  1  0
 18 19  2  0
 19 20  1  0
 20 21  2  0
 21 22  1  0
 22 23  2  0
 17  2  1  0
 23 18  1  0
 16  7  1  0
  3 24  1  0
  8 25  1  0
  9 26  1  0
 11 27  1  0
 16 28  1  0
 19 29  1  0
 20 30  1  0
 21 31  1  0
 22 32  1  0
 23 33  1  0
M  CHG  2  13   1  15  -1
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  O   UNK     0       3.107  -2.820  -1.113  0.00  0.00           O+0
HETATM    2  C   UNK     0       1.895  -2.556  -0.907  0.00  0.00           C+0
HETATM    3  N   UNK     0       0.917  -3.568  -1.147  0.00  0.00           N+0
HETATM    4  C   UNK     0      -0.313  -2.975  -0.825  0.00  0.00           C+0
HETATM    5  O   UNK     0      -1.468  -3.512  -0.888  0.00  0.00           O+0
HETATM    6  C   UNK     0      -0.044  -1.585  -0.392  0.00  0.00           C+0
HETATM    7  C   UNK     0      -1.125  -0.671  -0.023  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.781  -0.928   1.160  0.00  0.00           C+0
HETATM    9  C   UNK     0      -2.854  -0.214   1.618  0.00  0.00           C+0
HETATM   10  C   UNK     0      -3.296   0.826   0.827  0.00  0.00           C+0
HETATM   11  O   UNK     0      -4.380   1.579   1.245  0.00  0.00           O+0
HETATM   12  C   UNK     0      -2.672   1.136  -0.384  0.00  0.00           C+0
HETATM   13  N   UNK     0      -3.169   2.214  -1.143  0.00  0.00           N+1
HETATM   14  O   UNK     0      -3.026   2.241  -2.388  0.00  0.00           O+0
HETATM   15  O   UNK     0      -3.814   3.234  -0.497  0.00  0.00           O-1
HETATM   16  C   UNK     0      -1.587   0.364  -0.774  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.228  -1.331  -0.434  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.979  -0.127  -0.092  0.00  0.00           C+0
HETATM   19  C   UNK     0       1.447   0.987   0.490  0.00  0.00           C+0
HETATM   20  C   UNK     0       2.212   2.110   0.784  0.00  0.00           C+0
HETATM   21  C   UNK     0       3.566   2.141   0.493  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.128   1.044  -0.086  0.00  0.00           C+0
HETATM   23  C   UNK     0       3.348  -0.066  -0.371  0.00  0.00           C+0
HETATM   24  H   UNK     0       1.113  -4.561  -1.503  0.00  0.00           H+0
HETATM   25  H   UNK     0      -1.446  -1.752   1.779  0.00  0.00           H+0
HETATM   26  H   UNK     0      -3.361  -0.411   2.560  0.00  0.00           H+0
HETATM   27  H   UNK     0      -4.840   1.348   2.111  0.00  0.00           H+0
HETATM   28  H   UNK     0      -1.131   0.639  -1.722  0.00  0.00           H+0
HETATM   29  H   UNK     0       0.421   1.030   0.774  0.00  0.00           H+0
HETATM   30  H   UNK     0       1.736   2.952   1.232  0.00  0.00           H+0
HETATM   31  H   UNK     0       4.138   3.035   0.734  0.00  0.00           H+0
HETATM   32  H   UNK     0       5.174   1.079  -0.307  0.00  0.00           H+0
HETATM   33  H   UNK     0       3.897  -0.882  -0.812  0.00  0.00           H+0
CONECT    1    2                                                            
CONECT    2    1    3   17                                                  
CONECT    3    2    4   24                                                  
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7   17                                                  
CONECT    7    6    8   16                                                  
CONECT    8    7    9   25                                                  
CONECT    9    8   10   26                                                  
CONECT   10    9   11   12                                                  
CONECT   11   10   27                                                       
CONECT   12   10   13   16                                                  
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13                                                            
CONECT   16   12    7   28                                                  
CONECT   17    6   18    2                                                  
CONECT   18   17   19   23                                                  
CONECT   19   18   20   29                                                  
CONECT   20   19   21   30                                                  
CONECT   21   20   22   31                                                  
CONECT   22   21   23   32                                                  
CONECT   23   22   18   33                                                  
CONECT   24    3                                                            
CONECT   25    8                                                            
CONECT   26    9                                                            
CONECT   27   11                                                            
CONECT   28   16                                                            
CONECT   29   19                                                            
CONECT   30   20                                                            
CONECT   31   21                                                            
CONECT   32   22                                                            
CONECT   33   23                                                            
MASTER        0    0    0    0    0    0    0    0   33    0   70    0
END

RDKit          3D

33 35  0  0  0  0  0  0  0  0999 V2000
    3.1070   -2.8203   -1.1130 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8949   -2.5556   -0.9070 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9165   -3.5676   -1.1465 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3130   -2.9746   -0.8251 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4679   -3.5122   -0.8877 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0442   -1.5849   -0.3918 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1250   -0.6711   -0.0233 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7807   -0.9279    1.1600 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8543   -0.2141    1.6178 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2957    0.8256    0.8269 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3797    1.5790    1.2446 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6719    1.1364   -0.3841 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1686    2.2136   -1.1434 N   0  0  0  0  0  4  0  0  0  0  0  0
   -3.0263    2.2411   -2.3881 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8136    3.2344   -0.4966 O   0  0  0  0  0  1  0  0  0  0  0  0
   -1.5870    0.3642   -0.7737 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2275   -1.3305   -0.4339 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9789   -0.1272   -0.0915 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4472    0.9865    0.4898 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2119    2.1097    0.7837 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5660    2.1406    0.4933 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1282    1.0439   -0.0863 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3481   -0.0660   -0.3705 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1127   -4.5615   -1.5028 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4455   -1.7517    1.7792 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3605   -0.4113    2.5602 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8404    1.3479    2.1112 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1310    0.6390   -1.7217 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4208    1.0300    0.7737 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7365    2.9523    1.2319 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1379    3.0351    0.7338 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1736    1.0788   -0.3070 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8973   -0.8818   -0.8120 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  1  0
  4  5  2  0
  4  6  1  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 10 12  1  0
 12 13  1  0
 13 14  2  0
 13 15  1  0
 12 16  2  0
  6 17  2  0
 17 18  1  0
 18 19  2  0
 19 20  1  0
 20 21  2  0
 21 22  1  0
 22 23  2  0
 17  2  1  0
 23 18  1  0
 16  7  1  0
  3 24  1  0
  8 25  1  0
  9 26  1  0
 11 27  1  0
 16 28  1  0
 19 29  1  0
 20 30  1  0
 21 31  1  0
 22 32  1  0
 23 33  1  0
M  CHG  2  13   1  15  -1
M  END

View in JSmol View NMR Assignments View DFT Assignments 3D Conformers

Synonyms

Not Available

Chemical Formula

C₁₆H₁₀N₂O₅

Average Mass

310.2650 Da

Monoisotopic Mass

310.05897 Da

IUPAC Name

{[5-(2,5-dioxo-4-phenyl-2,5-dihydro-1H-pyrrol-3-yl)-2-hydroxyphenyl]nitro}-lambda1-oxidanyl

Traditional Name

[5-(2,5-dioxo-4-phenyl-1H-pyrrol-3-yl)-2-hydroxyphenylnitro]-lambda1-oxidanyl

CAS Registry Number

Not Available

SMILES

OC1=C(C=C(C=C1)C1=C(C(=O)NC1=O)C1=CC=CC=C1)[N+]([O-])=O

InChI Identifier

InChI=1S/C16H10N2O5/c19-12-7-6-10(8-11(12)18(22)23)14-13(15(20)17-16(14)21)9-4-2-1-3-5-9/h1-8,19H,(H,17,20,21)

InChI Key

PWZWHCDOYSVJMU-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 150 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 175 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 225 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 250 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Vibrio sp.	NPAtlas	20431617

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.14	ALOGPS
logP	2.34	ChemAxon
logS	-4.3	ALOGPS
pKa (Strongest Acidic)	6.12	ChemAxon
pKa (Strongest Basic)	-4.8	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	109.54 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	80.56 m³·mol⁻¹	ChemAxon
Polarizability	29.72 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA017302

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

27024978

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

46846127

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Al-Zereini W, Fotso Fondja Yao CB, Laatsch H, Anke H: Aqabamycins A-G: novel nitro maleimides from a marine Vibrio species. I. Taxonomy, fermentation, isolation and biological activities. J Antibiot (Tokyo). 2010 Jun;63(6):297-301. doi: 10.1038/ja.2010.34. Epub 2010 Apr 30. [PubMed:20431617 ]

Showing NP-Card for Aqabamycin C (NP0009182)

MOL for NP0009182 (Aqabamycin C)

3D MOL for NP0009182 (Aqabamycin C)

3D SDF for NP0009182 (Aqabamycin C)

3D-SDF for NP0009182 (Aqabamycin C)

PDB for NP0009182 (Aqabamycin C)

3D PDB for NP0009182 (Aqabamycin C)

SMILES for NP0009182 (Aqabamycin C)

INCHI for NP0009182 (Aqabamycin C)

Structure for NP0009182 (Aqabamycin C)

3D Structure for NP0009182 (Aqabamycin C)