Showing NP-Card for Amidepsine I (NP0008882)
| Record Information | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Version | 2.0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Created at | 2020-12-09 06:22:35 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Updated at | 2021-07-15 17:01:42 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| NP-MRD ID | NP0008882 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Secondary Accession Numbers | None | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural Product Identification | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Common Name | Amidepsine I | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Provided By | NPAtlas![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Description | Amidepsine I is found in Humicola. Based on a literature review very few articles have been published on (2S)-2-({[4-(2-{[(2S,3R,4S,5S,6R)-3-(acetyloxy)-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-4-(2-hydroxy-4-methoxy-6-methylbenzoyloxy)-6-methylbenzoyloxy)-2-hydroxy-6-methylphenyl](hydroxy)methylidene}amino)propanoic acid. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Structure | MOL for NP0008882 (Amidepsine I)
Mrv1652307012120293D
93 96 0 0 0 0 999 V2000
-11.2132 3.3812 -0.7888 C 0 0 0 0 0 0 0 0 0 0 0 0
-10.3959 3.7507 0.3061 O 0 0 0 0 0 0 0 0 0 0 0 0
-9.0277 3.4785 0.2015 C 0 0 0 0 0 0 0 0 0 0 0 0
-8.4794 2.8748 -0.9164 C 0 0 0 0 0 0 0 0 0 0 0 0
-7.1369 2.5956 -1.0458 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.6507 1.9537 -2.2677 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.2718 2.9230 -0.0251 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.8373 2.6603 -0.0900 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.1097 2.9887 0.8801 O 0 0 0 0 0 0 0 0 0 0 0 0
-4.2319 2.0607 -1.1792 O 0 0 0 0 0 0 0 0 0 0 0 0
-2.8589 1.8578 -1.1355 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.9404 2.7650 -1.6202 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.5822 2.5433 -1.5665 C 0 0 0 0 0 0 0 0 0 0 0 0
0.3536 3.5762 -2.1131 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.0768 1.3949 -1.0213 C 0 0 0 0 0 0 0 0 0 0 0 0
1.3711 1.1302 -0.9511 C 0 0 0 0 0 0 0 0 0 0 0 0
1.9667 0.5332 -1.8842 O 0 0 0 0 0 0 0 0 0 0 0 0
2.1302 1.5264 0.1407 O 0 0 0 0 0 0 0 0 0 0 0 0
3.5041 1.2394 0.1472 C 0 0 0 0 0 0 0 0 0 0 0 0
3.9969 0.1093 0.7418 C 0 0 0 0 0 0 0 0 0 0 0 0
5.3808 -0.1731 0.7444 C 0 0 0 0 0 0 0 0 0 0 0 0
5.8050 -1.4254 1.4244 C 0 0 0 0 0 0 0 0 0 0 0 0
6.2626 0.6800 0.1499 C 0 0 0 0 0 0 0 0 0 0 0 0
7.6826 0.4586 0.1085 C 0 0 0 0 0 0 0 0 0 0 0 0
8.3667 1.4065 -0.5190 O 0 0 0 0 0 0 0 0 0 0 0 0
8.5021 -0.5366 0.5845 N 0 0 0 0 0 0 0 0 0 0 0 0
9.9621 -0.4377 0.3522 C 0 0 1 0 0 0 0 0 0 0 0 0
10.6843 -0.3764 1.6851 C 0 0 0 0 0 0 0 0 0 0 0 0
10.3717 -1.6560 -0.3659 C 0 0 0 0 0 0 0 0 0 0 0 0
9.5404 -2.5225 -0.6596 O 0 0 0 0 0 0 0 0 0 0 0 0
11.6970 -1.8667 -0.7323 O 0 0 0 0 0 0 0 0 0 0 0 0
5.7641 1.8477 -0.4660 C 0 0 0 0 0 0 0 0 0 0 0 0
6.6461 2.7516 -1.0899 O 0 0 0 0 0 0 0 0 0 0 0 0
4.4167 2.0753 -0.4408 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.9700 0.4545 -0.5215 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.4278 -0.7072 0.0288 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.1290 -1.7727 0.5806 C 0 0 2 0 0 0 0 0 0 0 0 0
-0.8070 -1.7809 1.9600 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.7057 -2.6030 2.6526 C 0 0 2 0 0 0 0 0 0 0 0 0
-1.1516 -2.8044 4.0463 C 0 0 1 0 0 0 0 0 0 0 0 0
-1.9461 -3.6002 4.8338 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.8051 -3.9692 1.9971 C 0 0 1 0 0 0 0 0 0 0 0 0
-2.9649 -4.0959 1.2462 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.5903 -4.1395 1.1176 C 0 0 2 0 0 0 0 0 0 0 0 0
0.5721 -3.8762 1.8268 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.6838 -3.1157 0.0065 C 0 0 1 0 0 0 0 0 0 0 0 0
-1.5973 -3.6061 -0.9549 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.1243 -3.9159 -2.2159 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.9563 -4.4358 -3.3212 C 0 0 0 0 0 0 0 0 0 0 0 0
0.1121 -3.7484 -2.4606 O 0 0 0 0 0 0 0 0 0 0 0 0
-2.3180 0.7037 -0.5891 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.8103 3.5253 1.0931 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.9749 3.8825 2.1666 O 0 0 0 0 0 0 0 0 0 0 0 0
-8.1533 3.8049 1.2232 C 0 0 0 0 0 0 0 0 0 0 0 0
-11.0790 2.2929 -1.0162 H 0 0 0 0 0 0 0 0 0 0 0 0
-12.2750 3.6414 -0.6170 H 0 0 0 0 0 0 0 0 0 0 0 0
-10.8201 3.9144 -1.6807 H 0 0 0 0 0 0 0 0 0 0 0 0
-9.1829 2.6191 -1.7238 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.5107 1.6871 -2.9322 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1381 1.0128 -2.0059 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.0046 2.6106 -2.8766 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.3501 3.6891 -2.0585 H 0 0 0 0 0 0 0 0 0 0 0 0
1.2807 3.4982 -1.4816 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.0718 4.5875 -1.8832 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5538 3.4525 -3.1755 H 0 0 0 0 0 0 0 0 0 0 0 0
3.3000 -0.5665 1.2111 H 0 0 0 0 0 0 0 0 0 0 0 0
4.8792 -1.8599 1.9266 H 0 0 0 0 0 0 0 0 0 0 0 0
6.4427 -1.1439 2.2788 H 0 0 0 0 0 0 0 0 0 0 0 0
6.2462 -2.1650 0.7647 H 0 0 0 0 0 0 0 0 0 0 0 0
8.2419 -1.3711 1.0955 H 0 0 0 0 0 0 0 0 0 0 0 0
10.1497 0.4683 -0.2382 H 0 0 0 0 0 0 0 0 0 0 0 0
11.7126 -0.7765 1.5688 H 0 0 0 0 0 0 0 0 0 0 0 0
10.1667 -0.9397 2.4686 H 0 0 0 0 0 0 0 0 0 0 0 0
10.8132 0.7014 1.9550 H 0 0 0 0 0 0 0 0 0 0 0 0
12.4717 -1.5706 -0.1500 H 0 0 0 0 0 0 0 0 0 0 0 0
6.2584 3.5593 -1.5130 H 0 0 0 0 0 0 0 0 0 0 0 0
4.0296 2.9719 -0.9139 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.2293 -1.6978 0.5587 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.7125 -2.1262 2.7028 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.1613 -3.2955 3.9631 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.0030 -1.8041 4.5309 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.4253 -4.3332 5.2769 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.8443 -4.7700 2.7862 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.6848 -4.5407 1.7890 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.5633 -5.1493 0.6486 H 0 0 0 0 0 0 0 0 0 0 0 0
1.3524 -4.0688 1.2412 H 0 0 0 0 0 0 0 0 0 0 0 0
0.3397 -3.0435 -0.4174 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.9390 -5.5553 -3.2633 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.0048 -4.0768 -3.2922 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.4895 -4.1949 -4.3076 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.0268 -0.0217 -0.2014 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.3171 4.3170 2.9896 H 0 0 0 0 0 0 0 0 0 0 0 0
-8.5660 4.2796 2.1087 H 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0 0 0 0
2 3 1 0 0 0 0
3 4 2 0 0 0 0
4 5 1 0 0 0 0
5 6 1 0 0 0 0
5 7 2 0 0 0 0
7 8 1 0 0 0 0
8 9 2 0 0 0 0
8 10 1 0 0 0 0
10 11 1 0 0 0 0
11 12 2 0 0 0 0
12 13 1 0 0 0 0
13 14 1 0 0 0 0
13 15 2 0 0 0 0
15 16 1 0 0 0 0
16 17 2 0 0 0 0
16 18 1 0 0 0 0
18 19 1 0 0 0 0
19 20 2 0 0 0 0
20 21 1 0 0 0 0
21 22 1 0 0 0 0
21 23 2 0 0 0 0
23 24 1 0 0 0 0
24 25 2 0 0 0 0
24 26 1 0 0 0 0
26 27 1 0 0 0 0
27 28 1 0 0 0 0
27 29 1 0 0 0 0
29 30 2 0 0 0 0
29 31 1 0 0 0 0
23 32 1 0 0 0 0
32 33 1 0 0 0 0
32 34 2 0 0 0 0
15 35 1 0 0 0 0
35 36 1 0 0 0 0
36 37 1 0 0 0 0
37 38 1 0 0 0 0
38 39 1 0 0 0 0
39 40 1 0 0 0 0
40 41 1 0 0 0 0
39 42 1 0 0 0 0
42 43 1 0 0 0 0
42 44 1 0 0 0 0
44 45 1 0 0 0 0
44 46 1 0 0 0 0
46 47 1 0 0 0 0
47 48 1 0 0 0 0
48 49 1 0 0 0 0
48 50 2 0 0 0 0
35 51 2 0 0 0 0
7 52 1 0 0 0 0
52 53 1 0 0 0 0
52 54 2 0 0 0 0
54 3 1 0 0 0 0
51 11 1 0 0 0 0
34 19 1 0 0 0 0
46 37 1 0 0 0 0
1 55 1 0 0 0 0
1 56 1 0 0 0 0
1 57 1 0 0 0 0
4 58 1 0 0 0 0
6 59 1 0 0 0 0
6 60 1 0 0 0 0
6 61 1 0 0 0 0
12 62 1 0 0 0 0
14 63 1 0 0 0 0
14 64 1 0 0 0 0
14 65 1 0 0 0 0
20 66 1 0 0 0 0
22 67 1 0 0 0 0
22 68 1 0 0 0 0
22 69 1 0 0 0 0
26 70 1 0 0 0 0
27 71 1 6 0 0 0
28 72 1 0 0 0 0
28 73 1 0 0 0 0
28 74 1 0 0 0 0
31 75 1 0 0 0 0
33 76 1 0 0 0 0
34 77 1 0 0 0 0
37 78 1 1 0 0 0
39 79 1 1 0 0 0
40 80 1 0 0 0 0
40 81 1 0 0 0 0
41 82 1 0 0 0 0
42 83 1 1 0 0 0
43 84 1 0 0 0 0
44 85 1 6 0 0 0
45 86 1 0 0 0 0
46 87 1 6 0 0 0
49 88 1 0 0 0 0
49 89 1 0 0 0 0
49 90 1 0 0 0 0
51 91 1 0 0 0 0
53 92 1 0 0 0 0
54 93 1 0 0 0 0
M END
3D MOL for NP0008882 (Amidepsine I)
RDKit 3D
93 96 0 0 0 0 0 0 0 0999 V2000
-11.2132 3.3812 -0.7888 C 0 0 0 0 0 0 0 0 0 0 0 0
-10.3959 3.7507 0.3061 O 0 0 0 0 0 0 0 0 0 0 0 0
-9.0277 3.4785 0.2015 C 0 0 0 0 0 0 0 0 0 0 0 0
-8.4794 2.8748 -0.9164 C 0 0 0 0 0 0 0 0 0 0 0 0
-7.1369 2.5956 -1.0458 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.6507 1.9537 -2.2677 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.2718 2.9230 -0.0251 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.8373 2.6603 -0.0900 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.1097 2.9887 0.8801 O 0 0 0 0 0 0 0 0 0 0 0 0
-4.2319 2.0607 -1.1792 O 0 0 0 0 0 0 0 0 0 0 0 0
-2.8589 1.8578 -1.1355 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.9404 2.7650 -1.6202 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.5822 2.5433 -1.5665 C 0 0 0 0 0 0 0 0 0 0 0 0
0.3536 3.5762 -2.1131 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.0768 1.3949 -1.0213 C 0 0 0 0 0 0 0 0 0 0 0 0
1.3711 1.1302 -0.9511 C 0 0 0 0 0 0 0 0 0 0 0 0
1.9667 0.5332 -1.8842 O 0 0 0 0 0 0 0 0 0 0 0 0
2.1302 1.5264 0.1407 O 0 0 0 0 0 0 0 0 0 0 0 0
3.5041 1.2394 0.1472 C 0 0 0 0 0 0 0 0 0 0 0 0
3.9969 0.1093 0.7418 C 0 0 0 0 0 0 0 0 0 0 0 0
5.3808 -0.1731 0.7444 C 0 0 0 0 0 0 0 0 0 0 0 0
5.8050 -1.4254 1.4244 C 0 0 0 0 0 0 0 0 0 0 0 0
6.2626 0.6800 0.1499 C 0 0 0 0 0 0 0 0 0 0 0 0
7.6826 0.4586 0.1085 C 0 0 0 0 0 0 0 0 0 0 0 0
8.3667 1.4065 -0.5190 O 0 0 0 0 0 0 0 0 0 0 0 0
8.5021 -0.5366 0.5845 N 0 0 0 0 0 0 0 0 0 0 0 0
9.9621 -0.4377 0.3522 C 0 0 1 0 0 0 0 0 0 0 0 0
10.6843 -0.3764 1.6851 C 0 0 0 0 0 0 0 0 0 0 0 0
10.3717 -1.6560 -0.3659 C 0 0 0 0 0 0 0 0 0 0 0 0
9.5404 -2.5225 -0.6596 O 0 0 0 0 0 0 0 0 0 0 0 0
11.6970 -1.8667 -0.7323 O 0 0 0 0 0 0 0 0 0 0 0 0
5.7641 1.8477 -0.4660 C 0 0 0 0 0 0 0 0 0 0 0 0
6.6461 2.7516 -1.0899 O 0 0 0 0 0 0 0 0 0 0 0 0
4.4167 2.0753 -0.4408 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.9700 0.4545 -0.5215 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.4278 -0.7072 0.0288 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.1290 -1.7727 0.5806 C 0 0 2 0 0 0 0 0 0 0 0 0
-0.8070 -1.7809 1.9600 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.7057 -2.6030 2.6526 C 0 0 2 0 0 0 0 0 0 0 0 0
-1.1516 -2.8044 4.0463 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.9461 -3.6002 4.8338 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.8051 -3.9692 1.9971 C 0 0 1 0 0 0 0 0 0 0 0 0
-2.9649 -4.0959 1.2462 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.5903 -4.1395 1.1176 C 0 0 2 0 0 0 0 0 0 0 0 0
0.5721 -3.8762 1.8268 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.6838 -3.1157 0.0065 C 0 0 1 0 0 0 0 0 0 0 0 0
-1.5973 -3.6061 -0.9549 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.1243 -3.9159 -2.2159 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.9563 -4.4358 -3.3212 C 0 0 0 0 0 0 0 0 0 0 0 0
0.1121 -3.7484 -2.4606 O 0 0 0 0 0 0 0 0 0 0 0 0
-2.3180 0.7037 -0.5891 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.8103 3.5253 1.0931 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.9749 3.8825 2.1666 O 0 0 0 0 0 0 0 0 0 0 0 0
-8.1533 3.8049 1.2232 C 0 0 0 0 0 0 0 0 0 0 0 0
-11.0790 2.2929 -1.0162 H 0 0 0 0 0 0 0 0 0 0 0 0
-12.2750 3.6414 -0.6170 H 0 0 0 0 0 0 0 0 0 0 0 0
-10.8201 3.9144 -1.6807 H 0 0 0 0 0 0 0 0 0 0 0 0
-9.1829 2.6191 -1.7238 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.5107 1.6871 -2.9322 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1381 1.0128 -2.0059 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.0046 2.6106 -2.8766 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.3501 3.6891 -2.0585 H 0 0 0 0 0 0 0 0 0 0 0 0
1.2807 3.4982 -1.4816 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.0718 4.5875 -1.8832 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5538 3.4525 -3.1755 H 0 0 0 0 0 0 0 0 0 0 0 0
3.3000 -0.5665 1.2111 H 0 0 0 0 0 0 0 0 0 0 0 0
4.8792 -1.8599 1.9266 H 0 0 0 0 0 0 0 0 0 0 0 0
6.4427 -1.1439 2.2788 H 0 0 0 0 0 0 0 0 0 0 0 0
6.2462 -2.1650 0.7647 H 0 0 0 0 0 0 0 0 0 0 0 0
8.2419 -1.3711 1.0955 H 0 0 0 0 0 0 0 0 0 0 0 0
10.1497 0.4683 -0.2382 H 0 0 0 0 0 0 0 0 0 0 0 0
11.7126 -0.7765 1.5688 H 0 0 0 0 0 0 0 0 0 0 0 0
10.1667 -0.9397 2.4686 H 0 0 0 0 0 0 0 0 0 0 0 0
10.8132 0.7014 1.9550 H 0 0 0 0 0 0 0 0 0 0 0 0
12.4717 -1.5706 -0.1500 H 0 0 0 0 0 0 0 0 0 0 0 0
6.2584 3.5593 -1.5130 H 0 0 0 0 0 0 0 0 0 0 0 0
4.0296 2.9719 -0.9139 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.2293 -1.6978 0.5587 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.7125 -2.1262 2.7028 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.1613 -3.2955 3.9631 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.0030 -1.8041 4.5309 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.4253 -4.3332 5.2769 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.8443 -4.7700 2.7862 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.6848 -4.5407 1.7890 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.5633 -5.1493 0.6486 H 0 0 0 0 0 0 0 0 0 0 0 0
1.3524 -4.0688 1.2412 H 0 0 0 0 0 0 0 0 0 0 0 0
0.3397 -3.0435 -0.4174 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.9390 -5.5553 -3.2633 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.0048 -4.0768 -3.2922 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.4895 -4.1949 -4.3076 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.0268 -0.0217 -0.2014 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.3171 4.3170 2.9896 H 0 0 0 0 0 0 0 0 0 0 0 0
-8.5660 4.2796 2.1087 H 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0
2 3 1 0
3 4 2 0
4 5 1 0
5 6 1 0
5 7 2 0
7 8 1 0
8 9 2 0
8 10 1 0
10 11 1 0
11 12 2 0
12 13 1 0
13 14 1 0
13 15 2 0
15 16 1 0
16 17 2 0
16 18 1 0
18 19 1 0
19 20 2 0
20 21 1 0
21 22 1 0
21 23 2 0
23 24 1 0
24 25 2 0
24 26 1 0
26 27 1 0
27 28 1 0
27 29 1 0
29 30 2 0
29 31 1 0
23 32 1 0
32 33 1 0
32 34 2 0
15 35 1 0
35 36 1 0
36 37 1 0
37 38 1 0
38 39 1 0
39 40 1 0
40 41 1 0
39 42 1 0
42 43 1 0
42 44 1 0
44 45 1 0
44 46 1 0
46 47 1 0
47 48 1 0
48 49 1 0
48 50 2 0
35 51 2 0
7 52 1 0
52 53 1 0
52 54 2 0
54 3 1 0
51 11 1 0
34 19 1 0
46 37 1 0
1 55 1 0
1 56 1 0
1 57 1 0
4 58 1 0
6 59 1 0
6 60 1 0
6 61 1 0
12 62 1 0
14 63 1 0
14 64 1 0
14 65 1 0
20 66 1 0
22 67 1 0
22 68 1 0
22 69 1 0
26 70 1 0
27 71 1 6
28 72 1 0
28 73 1 0
28 74 1 0
31 75 1 0
33 76 1 0
34 77 1 0
37 78 1 1
39 79 1 1
40 80 1 0
40 81 1 0
41 82 1 0
42 83 1 1
43 84 1 0
44 85 1 6
45 86 1 0
46 87 1 6
49 88 1 0
49 89 1 0
49 90 1 0
51 91 1 0
53 92 1 0
54 93 1 0
M END
3D SDF for NP0008882 (Amidepsine I)
Mrv1652307012120293D
93 96 0 0 0 0 999 V2000
-11.2132 3.3812 -0.7888 C 0 0 0 0 0 0 0 0 0 0 0 0
-10.3959 3.7507 0.3061 O 0 0 0 0 0 0 0 0 0 0 0 0
-9.0277 3.4785 0.2015 C 0 0 0 0 0 0 0 0 0 0 0 0
-8.4794 2.8748 -0.9164 C 0 0 0 0 0 0 0 0 0 0 0 0
-7.1369 2.5956 -1.0458 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.6507 1.9537 -2.2677 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.2718 2.9230 -0.0251 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.8373 2.6603 -0.0900 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.1097 2.9887 0.8801 O 0 0 0 0 0 0 0 0 0 0 0 0
-4.2319 2.0607 -1.1792 O 0 0 0 0 0 0 0 0 0 0 0 0
-2.8589 1.8578 -1.1355 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.9404 2.7650 -1.6202 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.5822 2.5433 -1.5665 C 0 0 0 0 0 0 0 0 0 0 0 0
0.3536 3.5762 -2.1131 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.0768 1.3949 -1.0213 C 0 0 0 0 0 0 0 0 0 0 0 0
1.3711 1.1302 -0.9511 C 0 0 0 0 0 0 0 0 0 0 0 0
1.9667 0.5332 -1.8842 O 0 0 0 0 0 0 0 0 0 0 0 0
2.1302 1.5264 0.1407 O 0 0 0 0 0 0 0 0 0 0 0 0
3.5041 1.2394 0.1472 C 0 0 0 0 0 0 0 0 0 0 0 0
3.9969 0.1093 0.7418 C 0 0 0 0 0 0 0 0 0 0 0 0
5.3808 -0.1731 0.7444 C 0 0 0 0 0 0 0 0 0 0 0 0
5.8050 -1.4254 1.4244 C 0 0 0 0 0 0 0 0 0 0 0 0
6.2626 0.6800 0.1499 C 0 0 0 0 0 0 0 0 0 0 0 0
7.6826 0.4586 0.1085 C 0 0 0 0 0 0 0 0 0 0 0 0
8.3667 1.4065 -0.5190 O 0 0 0 0 0 0 0 0 0 0 0 0
8.5021 -0.5366 0.5845 N 0 0 0 0 0 0 0 0 0 0 0 0
9.9621 -0.4377 0.3522 C 0 0 1 0 0 0 0 0 0 0 0 0
10.6843 -0.3764 1.6851 C 0 0 0 0 0 0 0 0 0 0 0 0
10.3717 -1.6560 -0.3659 C 0 0 0 0 0 0 0 0 0 0 0 0
9.5404 -2.5225 -0.6596 O 0 0 0 0 0 0 0 0 0 0 0 0
11.6970 -1.8667 -0.7323 O 0 0 0 0 0 0 0 0 0 0 0 0
5.7641 1.8477 -0.4660 C 0 0 0 0 0 0 0 0 0 0 0 0
6.6461 2.7516 -1.0899 O 0 0 0 0 0 0 0 0 0 0 0 0
4.4167 2.0753 -0.4408 C 0 0 0 0 0 0 0 0 0 0 0 0
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-0.8070 -1.7809 1.9600 O 0 0 0 0 0 0 0 0 0 0 0 0
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0.5721 -3.8762 1.8268 O 0 0 0 0 0 0 0 0 0 0 0 0
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-11.0790 2.2929 -1.0162 H 0 0 0 0 0 0 0 0 0 0 0 0
-12.2750 3.6414 -0.6170 H 0 0 0 0 0 0 0 0 0 0 0 0
-10.8201 3.9144 -1.6807 H 0 0 0 0 0 0 0 0 0 0 0 0
-9.1829 2.6191 -1.7238 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.5107 1.6871 -2.9322 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1381 1.0128 -2.0059 H 0 0 0 0 0 0 0 0 0 0 0 0
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-2.3501 3.6891 -2.0585 H 0 0 0 0 0 0 0 0 0 0 0 0
1.2807 3.4982 -1.4816 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.0718 4.5875 -1.8832 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5538 3.4525 -3.1755 H 0 0 0 0 0 0 0 0 0 0 0 0
3.3000 -0.5665 1.2111 H 0 0 0 0 0 0 0 0 0 0 0 0
4.8792 -1.8599 1.9266 H 0 0 0 0 0 0 0 0 0 0 0 0
6.4427 -1.1439 2.2788 H 0 0 0 0 0 0 0 0 0 0 0 0
6.2462 -2.1650 0.7647 H 0 0 0 0 0 0 0 0 0 0 0 0
8.2419 -1.3711 1.0955 H 0 0 0 0 0 0 0 0 0 0 0 0
10.1497 0.4683 -0.2382 H 0 0 0 0 0 0 0 0 0 0 0 0
11.7126 -0.7765 1.5688 H 0 0 0 0 0 0 0 0 0 0 0 0
10.1667 -0.9397 2.4686 H 0 0 0 0 0 0 0 0 0 0 0 0
10.8132 0.7014 1.9550 H 0 0 0 0 0 0 0 0 0 0 0 0
12.4717 -1.5706 -0.1500 H 0 0 0 0 0 0 0 0 0 0 0 0
6.2584 3.5593 -1.5130 H 0 0 0 0 0 0 0 0 0 0 0 0
4.0296 2.9719 -0.9139 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.2293 -1.6978 0.5587 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.7125 -2.1262 2.7028 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.1613 -3.2955 3.9631 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.0030 -1.8041 4.5309 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.4253 -4.3332 5.2769 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.8443 -4.7700 2.7862 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.6848 -4.5407 1.7890 H 0 0 0 0 0 0 0 0 0 0 0 0
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1.3524 -4.0688 1.2412 H 0 0 0 0 0 0 0 0 0 0 0 0
0.3397 -3.0435 -0.4174 H 0 0 0 0 0 0 0 0 0 0 0 0
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-3.0048 -4.0768 -3.2922 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.4895 -4.1949 -4.3076 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.0268 -0.0217 -0.2014 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.3171 4.3170 2.9896 H 0 0 0 0 0 0 0 0 0 0 0 0
-8.5660 4.2796 2.1087 H 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0 0 0 0
2 3 1 0 0 0 0
3 4 2 0 0 0 0
4 5 1 0 0 0 0
5 6 1 0 0 0 0
5 7 2 0 0 0 0
7 8 1 0 0 0 0
8 9 2 0 0 0 0
8 10 1 0 0 0 0
10 11 1 0 0 0 0
11 12 2 0 0 0 0
12 13 1 0 0 0 0
13 14 1 0 0 0 0
13 15 2 0 0 0 0
15 16 1 0 0 0 0
16 17 2 0 0 0 0
16 18 1 0 0 0 0
18 19 1 0 0 0 0
19 20 2 0 0 0 0
20 21 1 0 0 0 0
21 22 1 0 0 0 0
21 23 2 0 0 0 0
23 24 1 0 0 0 0
24 25 2 0 0 0 0
24 26 1 0 0 0 0
26 27 1 0 0 0 0
27 28 1 0 0 0 0
27 29 1 0 0 0 0
29 30 2 0 0 0 0
29 31 1 0 0 0 0
23 32 1 0 0 0 0
32 33 1 0 0 0 0
32 34 2 0 0 0 0
15 35 1 0 0 0 0
35 36 1 0 0 0 0
36 37 1 0 0 0 0
37 38 1 0 0 0 0
38 39 1 0 0 0 0
39 40 1 0 0 0 0
40 41 1 0 0 0 0
39 42 1 0 0 0 0
42 43 1 0 0 0 0
42 44 1 0 0 0 0
44 45 1 0 0 0 0
44 46 1 0 0 0 0
46 47 1 0 0 0 0
47 48 1 0 0 0 0
48 49 1 0 0 0 0
48 50 2 0 0 0 0
35 51 2 0 0 0 0
7 52 1 0 0 0 0
52 53 1 0 0 0 0
52 54 2 0 0 0 0
54 3 1 0 0 0 0
51 11 1 0 0 0 0
34 19 1 0 0 0 0
46 37 1 0 0 0 0
1 55 1 0 0 0 0
1 56 1 0 0 0 0
1 57 1 0 0 0 0
4 58 1 0 0 0 0
6 59 1 0 0 0 0
6 60 1 0 0 0 0
6 61 1 0 0 0 0
12 62 1 0 0 0 0
14 63 1 0 0 0 0
14 64 1 0 0 0 0
14 65 1 0 0 0 0
20 66 1 0 0 0 0
22 67 1 0 0 0 0
22 68 1 0 0 0 0
22 69 1 0 0 0 0
26 70 1 0 0 0 0
27 71 1 6 0 0 0
28 72 1 0 0 0 0
28 73 1 0 0 0 0
28 74 1 0 0 0 0
31 75 1 0 0 0 0
33 76 1 0 0 0 0
34 77 1 0 0 0 0
37 78 1 1 0 0 0
39 79 1 1 0 0 0
40 80 1 0 0 0 0
40 81 1 0 0 0 0
41 82 1 0 0 0 0
42 83 1 1 0 0 0
43 84 1 0 0 0 0
44 85 1 6 0 0 0
45 86 1 0 0 0 0
46 87 1 6 0 0 0
49 88 1 0 0 0 0
49 89 1 0 0 0 0
49 90 1 0 0 0 0
51 91 1 0 0 0 0
53 92 1 0 0 0 0
54 93 1 0 0 0 0
M END
> <DATABASE_ID>
NP0008882
> <DATABASE_NAME>
NP-MRD
> <SMILES>
[H]OC(=O)[C@@]([H])(N([H])C(=O)C1=C(C([H])=C(OC(=O)C2=C(C([H])=C(OC(=O)C3=C(C([H])=C(OC([H])([H])[H])C([H])=C3O[H])C([H])([H])[H])C([H])=C2O[C@]2([H])O[C@]([H])(C([H])([H])O[H])[C@@]([H])(O[H])[C@]([H])(O[H])[C@@]2([H])OC(=O)C([H])([H])[H])C([H])([H])[H])C([H])=C1O[H])C([H])([H])[H])C([H])([H])[H]
> <INCHI_IDENTIFIER>
InChI=1S/C36H39NO17/c1-14-8-20(11-22(40)26(14)32(44)37-17(4)33(45)46)51-35(48)28-16(3)9-21(52-34(47)27-15(2)7-19(49-6)10-23(27)41)12-24(28)53-36-31(50-18(5)39)30(43)29(42)25(13-38)54-36/h7-12,17,25,29-31,36,38,40-43H,13H2,1-6H3,(H,37,44)(H,45,46)/t17-,25+,29+,30-,31+,36+/m0/s1
> <INCHI_KEY>
RBFOMTAWEHHDSX-SBCZIEDESA-N
> <FORMULA>
C36H39NO17
> <MOLECULAR_WEIGHT>
757.698
> <EXACT_MASS>
757.2217988
> <JCHEM_ACCEPTOR_COUNT>
14
> <JCHEM_ATOM_COUNT>
93
> <JCHEM_AVERAGE_POLARIZABILITY>
76.82655165602536
> <JCHEM_BIOAVAILABILITY>
0
> <JCHEM_DONOR_COUNT>
7
> <JCHEM_FORMAL_CHARGE>
0
> <JCHEM_GHOSE_FILTER>
0
> <JCHEM_IUPAC>
(2S)-2-{[4-(2-{[(2S,3R,4S,5S,6R)-3-(acetyloxy)-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-4-(2-hydroxy-4-methoxy-6-methylbenzoyloxy)-6-methylbenzoyloxy)-2-hydroxy-6-methylphenyl]formamido}propanoic acid
> <ALOGPS_LOGP>
2.64
> <JCHEM_LOGP>
4.362134806333333
> <ALOGPS_LOGS>
-3.93
> <JCHEM_MDDR_LIKE_RULE>
1
> <JCHEM_NUMBER_OF_RINGS>
4
> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1
> <JCHEM_PKA>
7.789346056252468
> <JCHEM_PKA_STRONGEST_ACIDIC>
3.119041779213646
> <JCHEM_PKA_STRONGEST_BASIC>
-2.981092992155747
> <JCHEM_POLAR_SURFACE_AREA>
274.13999999999993
> <JCHEM_REFRACTIVITY>
183.04279999999997
> <JCHEM_ROTATABLE_BOND_COUNT>
15
> <JCHEM_RULE_OF_FIVE>
0
> <ALOGPS_SOLUBILITY>
8.81e-02 g/l
> <JCHEM_TRADITIONAL_IUPAC>
(2S)-2-{[4-(2-{[(2S,3R,4S,5S,6R)-3-(acetyloxy)-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-4-(2-hydroxy-4-methoxy-6-methylbenzoyloxy)-6-methylbenzoyloxy)-2-hydroxy-6-methylphenyl]formamido}propanoic acid
> <JCHEM_VEBER_RULE>
0
$$$$
3D-SDF for NP0008882 (Amidepsine I)
RDKit 3D
93 96 0 0 0 0 0 0 0 0999 V2000
-11.2132 3.3812 -0.7888 C 0 0 0 0 0 0 0 0 0 0 0 0
-10.3959 3.7507 0.3061 O 0 0 0 0 0 0 0 0 0 0 0 0
-9.0277 3.4785 0.2015 C 0 0 0 0 0 0 0 0 0 0 0 0
-8.4794 2.8748 -0.9164 C 0 0 0 0 0 0 0 0 0 0 0 0
-7.1369 2.5956 -1.0458 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.6507 1.9537 -2.2677 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.2718 2.9230 -0.0251 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.8373 2.6603 -0.0900 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.1097 2.9887 0.8801 O 0 0 0 0 0 0 0 0 0 0 0 0
-4.2319 2.0607 -1.1792 O 0 0 0 0 0 0 0 0 0 0 0 0
-2.8589 1.8578 -1.1355 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.9404 2.7650 -1.6202 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.5822 2.5433 -1.5665 C 0 0 0 0 0 0 0 0 0 0 0 0
0.3536 3.5762 -2.1131 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.0768 1.3949 -1.0213 C 0 0 0 0 0 0 0 0 0 0 0 0
1.3711 1.1302 -0.9511 C 0 0 0 0 0 0 0 0 0 0 0 0
1.9667 0.5332 -1.8842 O 0 0 0 0 0 0 0 0 0 0 0 0
2.1302 1.5264 0.1407 O 0 0 0 0 0 0 0 0 0 0 0 0
3.5041 1.2394 0.1472 C 0 0 0 0 0 0 0 0 0 0 0 0
3.9969 0.1093 0.7418 C 0 0 0 0 0 0 0 0 0 0 0 0
5.3808 -0.1731 0.7444 C 0 0 0 0 0 0 0 0 0 0 0 0
5.8050 -1.4254 1.4244 C 0 0 0 0 0 0 0 0 0 0 0 0
6.2626 0.6800 0.1499 C 0 0 0 0 0 0 0 0 0 0 0 0
7.6826 0.4586 0.1085 C 0 0 0 0 0 0 0 0 0 0 0 0
8.3667 1.4065 -0.5190 O 0 0 0 0 0 0 0 0 0 0 0 0
8.5021 -0.5366 0.5845 N 0 0 0 0 0 0 0 0 0 0 0 0
9.9621 -0.4377 0.3522 C 0 0 1 0 0 0 0 0 0 0 0 0
10.6843 -0.3764 1.6851 C 0 0 0 0 0 0 0 0 0 0 0 0
10.3717 -1.6560 -0.3659 C 0 0 0 0 0 0 0 0 0 0 0 0
9.5404 -2.5225 -0.6596 O 0 0 0 0 0 0 0 0 0 0 0 0
11.6970 -1.8667 -0.7323 O 0 0 0 0 0 0 0 0 0 0 0 0
5.7641 1.8477 -0.4660 C 0 0 0 0 0 0 0 0 0 0 0 0
6.6461 2.7516 -1.0899 O 0 0 0 0 0 0 0 0 0 0 0 0
4.4167 2.0753 -0.4408 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.9700 0.4545 -0.5215 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.4278 -0.7072 0.0288 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.1290 -1.7727 0.5806 C 0 0 2 0 0 0 0 0 0 0 0 0
-0.8070 -1.7809 1.9600 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.7057 -2.6030 2.6526 C 0 0 2 0 0 0 0 0 0 0 0 0
-1.1516 -2.8044 4.0463 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.9461 -3.6002 4.8338 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.8051 -3.9692 1.9971 C 0 0 1 0 0 0 0 0 0 0 0 0
-2.9649 -4.0959 1.2462 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.5903 -4.1395 1.1176 C 0 0 2 0 0 0 0 0 0 0 0 0
0.5721 -3.8762 1.8268 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.6838 -3.1157 0.0065 C 0 0 1 0 0 0 0 0 0 0 0 0
-1.5973 -3.6061 -0.9549 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.1243 -3.9159 -2.2159 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.9563 -4.4358 -3.3212 C 0 0 0 0 0 0 0 0 0 0 0 0
0.1121 -3.7484 -2.4606 O 0 0 0 0 0 0 0 0 0 0 0 0
-2.3180 0.7037 -0.5891 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.8103 3.5253 1.0931 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.9749 3.8825 2.1666 O 0 0 0 0 0 0 0 0 0 0 0 0
-8.1533 3.8049 1.2232 C 0 0 0 0 0 0 0 0 0 0 0 0
-11.0790 2.2929 -1.0162 H 0 0 0 0 0 0 0 0 0 0 0 0
-12.2750 3.6414 -0.6170 H 0 0 0 0 0 0 0 0 0 0 0 0
-10.8201 3.9144 -1.6807 H 0 0 0 0 0 0 0 0 0 0 0 0
-9.1829 2.6191 -1.7238 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.5107 1.6871 -2.9322 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1381 1.0128 -2.0059 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.0046 2.6106 -2.8766 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.3501 3.6891 -2.0585 H 0 0 0 0 0 0 0 0 0 0 0 0
1.2807 3.4982 -1.4816 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.0718 4.5875 -1.8832 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5538 3.4525 -3.1755 H 0 0 0 0 0 0 0 0 0 0 0 0
3.3000 -0.5665 1.2111 H 0 0 0 0 0 0 0 0 0 0 0 0
4.8792 -1.8599 1.9266 H 0 0 0 0 0 0 0 0 0 0 0 0
6.4427 -1.1439 2.2788 H 0 0 0 0 0 0 0 0 0 0 0 0
6.2462 -2.1650 0.7647 H 0 0 0 0 0 0 0 0 0 0 0 0
8.2419 -1.3711 1.0955 H 0 0 0 0 0 0 0 0 0 0 0 0
10.1497 0.4683 -0.2382 H 0 0 0 0 0 0 0 0 0 0 0 0
11.7126 -0.7765 1.5688 H 0 0 0 0 0 0 0 0 0 0 0 0
10.1667 -0.9397 2.4686 H 0 0 0 0 0 0 0 0 0 0 0 0
10.8132 0.7014 1.9550 H 0 0 0 0 0 0 0 0 0 0 0 0
12.4717 -1.5706 -0.1500 H 0 0 0 0 0 0 0 0 0 0 0 0
6.2584 3.5593 -1.5130 H 0 0 0 0 0 0 0 0 0 0 0 0
4.0296 2.9719 -0.9139 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.2293 -1.6978 0.5587 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.7125 -2.1262 2.7028 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.1613 -3.2955 3.9631 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.0030 -1.8041 4.5309 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.4253 -4.3332 5.2769 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.8443 -4.7700 2.7862 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.6848 -4.5407 1.7890 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.5633 -5.1493 0.6486 H 0 0 0 0 0 0 0 0 0 0 0 0
1.3524 -4.0688 1.2412 H 0 0 0 0 0 0 0 0 0 0 0 0
0.3397 -3.0435 -0.4174 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.9390 -5.5553 -3.2633 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.0048 -4.0768 -3.2922 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.4895 -4.1949 -4.3076 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.0268 -0.0217 -0.2014 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.3171 4.3170 2.9896 H 0 0 0 0 0 0 0 0 0 0 0 0
-8.5660 4.2796 2.1087 H 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0
2 3 1 0
3 4 2 0
4 5 1 0
5 6 1 0
5 7 2 0
7 8 1 0
8 9 2 0
8 10 1 0
10 11 1 0
11 12 2 0
12 13 1 0
13 14 1 0
13 15 2 0
15 16 1 0
16 17 2 0
16 18 1 0
18 19 1 0
19 20 2 0
20 21 1 0
21 22 1 0
21 23 2 0
23 24 1 0
24 25 2 0
24 26 1 0
26 27 1 0
27 28 1 0
27 29 1 0
29 30 2 0
29 31 1 0
23 32 1 0
32 33 1 0
32 34 2 0
15 35 1 0
35 36 1 0
36 37 1 0
37 38 1 0
38 39 1 0
39 40 1 0
40 41 1 0
39 42 1 0
42 43 1 0
42 44 1 0
44 45 1 0
44 46 1 0
46 47 1 0
47 48 1 0
48 49 1 0
48 50 2 0
35 51 2 0
7 52 1 0
52 53 1 0
52 54 2 0
54 3 1 0
51 11 1 0
34 19 1 0
46 37 1 0
1 55 1 0
1 56 1 0
1 57 1 0
4 58 1 0
6 59 1 0
6 60 1 0
6 61 1 0
12 62 1 0
14 63 1 0
14 64 1 0
14 65 1 0
20 66 1 0
22 67 1 0
22 68 1 0
22 69 1 0
26 70 1 0
27 71 1 6
28 72 1 0
28 73 1 0
28 74 1 0
31 75 1 0
33 76 1 0
34 77 1 0
37 78 1 1
39 79 1 1
40 80 1 0
40 81 1 0
41 82 1 0
42 83 1 1
43 84 1 0
44 85 1 6
45 86 1 0
46 87 1 6
49 88 1 0
49 89 1 0
49 90 1 0
51 91 1 0
53 92 1 0
54 93 1 0
M END
PDB for NP0008882 (Amidepsine I)HEADER PROTEIN 01-JUL-21 NONE TITLE NULL COMPND NULL SOURCE NULL KEYWDS NULL EXPDTA NULL AUTHOR Marvin REVDAT 1 01-JUL-21 0 HETATM 1 C UNK 0 -11.213 3.381 -0.789 0.00 0.00 C+0 HETATM 2 O UNK 0 -10.396 3.751 0.306 0.00 0.00 O+0 HETATM 3 C UNK 0 -9.028 3.478 0.202 0.00 0.00 C+0 HETATM 4 C UNK 0 -8.479 2.875 -0.916 0.00 0.00 C+0 HETATM 5 C UNK 0 -7.137 2.596 -1.046 0.00 0.00 C+0 HETATM 6 C UNK 0 -6.651 1.954 -2.268 0.00 0.00 C+0 HETATM 7 C UNK 0 -6.272 2.923 -0.025 0.00 0.00 C+0 HETATM 8 C UNK 0 -4.837 2.660 -0.090 0.00 0.00 C+0 HETATM 9 O UNK 0 -4.110 2.989 0.880 0.00 0.00 O+0 HETATM 10 O UNK 0 -4.232 2.061 -1.179 0.00 0.00 O+0 HETATM 11 C UNK 0 -2.859 1.858 -1.135 0.00 0.00 C+0 HETATM 12 C UNK 0 -1.940 2.765 -1.620 0.00 0.00 C+0 HETATM 13 C UNK 0 -0.582 2.543 -1.567 0.00 0.00 C+0 HETATM 14 C UNK 0 0.354 3.576 -2.113 0.00 0.00 C+0 HETATM 15 C UNK 0 -0.077 1.395 -1.021 0.00 0.00 C+0 HETATM 16 C UNK 0 1.371 1.130 -0.951 0.00 0.00 C+0 HETATM 17 O UNK 0 1.967 0.533 -1.884 0.00 0.00 O+0 HETATM 18 O UNK 0 2.130 1.526 0.141 0.00 0.00 O+0 HETATM 19 C UNK 0 3.504 1.239 0.147 0.00 0.00 C+0 HETATM 20 C UNK 0 3.997 0.109 0.742 0.00 0.00 C+0 HETATM 21 C UNK 0 5.381 -0.173 0.744 0.00 0.00 C+0 HETATM 22 C UNK 0 5.805 -1.425 1.424 0.00 0.00 C+0 HETATM 23 C UNK 0 6.263 0.680 0.150 0.00 0.00 C+0 HETATM 24 C UNK 0 7.683 0.459 0.109 0.00 0.00 C+0 HETATM 25 O UNK 0 8.367 1.407 -0.519 0.00 0.00 O+0 HETATM 26 N UNK 0 8.502 -0.537 0.585 0.00 0.00 N+0 HETATM 27 C UNK 0 9.962 -0.438 0.352 0.00 0.00 C+0 HETATM 28 C UNK 0 10.684 -0.376 1.685 0.00 0.00 C+0 HETATM 29 C UNK 0 10.372 -1.656 -0.366 0.00 0.00 C+0 HETATM 30 O UNK 0 9.540 -2.523 -0.660 0.00 0.00 O+0 HETATM 31 O UNK 0 11.697 -1.867 -0.732 0.00 0.00 O+0 HETATM 32 C UNK 0 5.764 1.848 -0.466 0.00 0.00 C+0 HETATM 33 O UNK 0 6.646 2.752 -1.090 0.00 0.00 O+0 HETATM 34 C UNK 0 4.417 2.075 -0.441 0.00 0.00 C+0 HETATM 35 C UNK 0 -0.970 0.455 -0.522 0.00 0.00 C+0 HETATM 36 O UNK 0 -0.428 -0.707 0.029 0.00 0.00 O+0 HETATM 37 C UNK 0 -1.129 -1.773 0.581 0.00 0.00 C+0 HETATM 38 O UNK 0 -0.807 -1.781 1.960 0.00 0.00 O+0 HETATM 39 C UNK 0 -1.706 -2.603 2.653 0.00 0.00 C+0 HETATM 40 C UNK 0 -1.152 -2.804 4.046 0.00 0.00 C+0 HETATM 41 O UNK 0 -1.946 -3.600 4.834 0.00 0.00 O+0 HETATM 42 C UNK 0 -1.805 -3.969 1.997 0.00 0.00 C+0 HETATM 43 O UNK 0 -2.965 -4.096 1.246 0.00 0.00 O+0 HETATM 44 C UNK 0 -0.590 -4.139 1.118 0.00 0.00 C+0 HETATM 45 O UNK 0 0.572 -3.876 1.827 0.00 0.00 O+0 HETATM 46 C UNK 0 -0.684 -3.116 0.007 0.00 0.00 C+0 HETATM 47 O UNK 0 -1.597 -3.606 -0.955 0.00 0.00 O+0 HETATM 48 C UNK 0 -1.124 -3.916 -2.216 0.00 0.00 C+0 HETATM 49 C UNK 0 -1.956 -4.436 -3.321 0.00 0.00 C+0 HETATM 50 O UNK 0 0.112 -3.748 -2.461 0.00 0.00 O+0 HETATM 51 C UNK 0 -2.318 0.704 -0.589 0.00 0.00 C+0 HETATM 52 C UNK 0 -6.810 3.525 1.093 0.00 0.00 C+0 HETATM 53 O UNK 0 -5.975 3.882 2.167 0.00 0.00 O+0 HETATM 54 C UNK 0 -8.153 3.805 1.223 0.00 0.00 C+0 HETATM 55 H UNK 0 -11.079 2.293 -1.016 0.00 0.00 H+0 HETATM 56 H UNK 0 -12.275 3.641 -0.617 0.00 0.00 H+0 HETATM 57 H UNK 0 -10.820 3.914 -1.681 0.00 0.00 H+0 HETATM 58 H UNK 0 -9.183 2.619 -1.724 0.00 0.00 H+0 HETATM 59 H UNK 0 -7.511 1.687 -2.932 0.00 0.00 H+0 HETATM 60 H UNK 0 -6.138 1.013 -2.006 0.00 0.00 H+0 HETATM 61 H UNK 0 -6.005 2.611 -2.877 0.00 0.00 H+0 HETATM 62 H UNK 0 -2.350 3.689 -2.059 0.00 0.00 H+0 HETATM 63 H UNK 0 1.281 3.498 -1.482 0.00 0.00 H+0 HETATM 64 H UNK 0 -0.072 4.588 -1.883 0.00 0.00 H+0 HETATM 65 H UNK 0 0.554 3.453 -3.176 0.00 0.00 H+0 HETATM 66 H UNK 0 3.300 -0.567 1.211 0.00 0.00 H+0 HETATM 67 H UNK 0 4.879 -1.860 1.927 0.00 0.00 H+0 HETATM 68 H UNK 0 6.443 -1.144 2.279 0.00 0.00 H+0 HETATM 69 H UNK 0 6.246 -2.165 0.765 0.00 0.00 H+0 HETATM 70 H UNK 0 8.242 -1.371 1.095 0.00 0.00 H+0 HETATM 71 H UNK 0 10.150 0.468 -0.238 0.00 0.00 H+0 HETATM 72 H UNK 0 11.713 -0.777 1.569 0.00 0.00 H+0 HETATM 73 H UNK 0 10.167 -0.940 2.469 0.00 0.00 H+0 HETATM 74 H UNK 0 10.813 0.701 1.955 0.00 0.00 H+0 HETATM 75 H UNK 0 12.472 -1.571 -0.150 0.00 0.00 H+0 HETATM 76 H UNK 0 6.258 3.559 -1.513 0.00 0.00 H+0 HETATM 77 H UNK 0 4.030 2.972 -0.914 0.00 0.00 H+0 HETATM 78 H UNK 0 -2.229 -1.698 0.559 0.00 0.00 H+0 HETATM 79 H UNK 0 -2.712 -2.126 2.703 0.00 0.00 H+0 HETATM 80 H UNK 0 -0.161 -3.296 3.963 0.00 0.00 H+0 HETATM 81 H UNK 0 -1.003 -1.804 4.531 0.00 0.00 H+0 HETATM 82 H UNK 0 -1.425 -4.333 5.277 0.00 0.00 H+0 HETATM 83 H UNK 0 -1.844 -4.770 2.786 0.00 0.00 H+0 HETATM 84 H UNK 0 -3.685 -4.541 1.789 0.00 0.00 H+0 HETATM 85 H UNK 0 -0.563 -5.149 0.649 0.00 0.00 H+0 HETATM 86 H UNK 0 1.352 -4.069 1.241 0.00 0.00 H+0 HETATM 87 H UNK 0 0.340 -3.043 -0.417 0.00 0.00 H+0 HETATM 88 H UNK 0 -1.939 -5.555 -3.263 0.00 0.00 H+0 HETATM 89 H UNK 0 -3.005 -4.077 -3.292 0.00 0.00 H+0 HETATM 90 H UNK 0 -1.490 -4.195 -4.308 0.00 0.00 H+0 HETATM 91 H UNK 0 -3.027 -0.022 -0.201 0.00 0.00 H+0 HETATM 92 H UNK 0 -6.317 4.317 2.990 0.00 0.00 H+0 HETATM 93 H UNK 0 -8.566 4.280 2.109 0.00 0.00 H+0 CONECT 1 2 55 56 57 CONECT 2 1 3 CONECT 3 2 4 54 CONECT 4 3 5 58 CONECT 5 4 6 7 CONECT 6 5 59 60 61 CONECT 7 5 8 52 CONECT 8 7 9 10 CONECT 9 8 CONECT 10 8 11 CONECT 11 10 12 51 CONECT 12 11 13 62 CONECT 13 12 14 15 CONECT 14 13 63 64 65 CONECT 15 13 16 35 CONECT 16 15 17 18 CONECT 17 16 CONECT 18 16 19 CONECT 19 18 20 34 CONECT 20 19 21 66 CONECT 21 20 22 23 CONECT 22 21 67 68 69 CONECT 23 21 24 32 CONECT 24 23 25 26 CONECT 25 24 CONECT 26 24 27 70 CONECT 27 26 28 29 71 CONECT 28 27 72 73 74 CONECT 29 27 30 31 CONECT 30 29 CONECT 31 29 75 CONECT 32 23 33 34 CONECT 33 32 76 CONECT 34 32 19 77 CONECT 35 15 36 51 CONECT 36 35 37 CONECT 37 36 38 46 78 CONECT 38 37 39 CONECT 39 38 40 42 79 CONECT 40 39 41 80 81 CONECT 41 40 82 CONECT 42 39 43 44 83 CONECT 43 42 84 CONECT 44 42 45 46 85 CONECT 45 44 86 CONECT 46 44 47 37 87 CONECT 47 46 48 CONECT 48 47 49 50 CONECT 49 48 88 89 90 CONECT 50 48 CONECT 51 35 11 91 CONECT 52 7 53 54 CONECT 53 52 92 CONECT 54 52 3 93 CONECT 55 1 CONECT 56 1 CONECT 57 1 CONECT 58 4 CONECT 59 6 CONECT 60 6 CONECT 61 6 CONECT 62 12 CONECT 63 14 CONECT 64 14 CONECT 65 14 CONECT 66 20 CONECT 67 22 CONECT 68 22 CONECT 69 22 CONECT 70 26 CONECT 71 27 CONECT 72 28 CONECT 73 28 CONECT 74 28 CONECT 75 31 CONECT 76 33 CONECT 77 34 CONECT 78 37 CONECT 79 39 CONECT 80 40 CONECT 81 40 CONECT 82 41 CONECT 83 42 CONECT 84 43 CONECT 85 44 CONECT 86 45 CONECT 87 46 CONECT 88 49 CONECT 89 49 CONECT 90 49 CONECT 91 51 CONECT 92 53 CONECT 93 54 MASTER 0 0 0 0 0 0 0 0 93 0 192 0 END SMILES for NP0008882 (Amidepsine I)[H]OC(=O)[C@@]([H])(N([H])C(=O)C1=C(C([H])=C(OC(=O)C2=C(C([H])=C(OC(=O)C3=C(C([H])=C(OC([H])([H])[H])C([H])=C3O[H])C([H])([H])[H])C([H])=C2O[C@]2([H])O[C@]([H])(C([H])([H])O[H])[C@@]([H])(O[H])[C@]([H])(O[H])[C@@]2([H])OC(=O)C([H])([H])[H])C([H])([H])[H])C([H])=C1O[H])C([H])([H])[H])C([H])([H])[H] INCHI for NP0008882 (Amidepsine I)InChI=1S/C36H39NO17/c1-14-8-20(11-22(40)26(14)32(44)37-17(4)33(45)46)51-35(48)28-16(3)9-21(52-34(47)27-15(2)7-19(49-6)10-23(27)41)12-24(28)53-36-31(50-18(5)39)30(43)29(42)25(13-38)54-36/h7-12,17,25,29-31,36,38,40-43H,13H2,1-6H3,(H,37,44)(H,45,46)/t17-,25+,29+,30-,31+,36+/m0/s1 3D Structure for NP0008882 (Amidepsine I) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Synonyms |
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| Chemical Formula | C36H39NO17 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Average Mass | 757.6980 Da | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Monoisotopic Mass | 757.22180 Da | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IUPAC Name | (2S)-2-{[4-(2-{[(2S,3R,4S,5S,6R)-3-(acetyloxy)-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-4-(2-hydroxy-4-methoxy-6-methylbenzoyloxy)-6-methylbenzoyloxy)-2-hydroxy-6-methylphenyl]formamido}propanoic acid | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Traditional Name | (2S)-2-{[4-(2-{[(2S,3R,4S,5S,6R)-3-(acetyloxy)-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-4-(2-hydroxy-4-methoxy-6-methylbenzoyloxy)-6-methylbenzoyloxy)-2-hydroxy-6-methylphenyl]formamido}propanoic acid | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| CAS Registry Number | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SMILES | COC1=CC(O)=C(C(=O)OC2=CC(O[C@@H]3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3OC(C)=O)=C(C(=O)OC3=CC(O)=C(C(=O)N[C@@H](C)C(O)=O)C(C)=C3)C(C)=C2)C(C)=C1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| InChI Identifier | InChI=1S/C36H39NO17/c1-14-8-20(11-22(40)26(14)32(44)37-17(4)33(45)46)51-35(48)28-16(3)9-21(52-34(47)27-15(2)7-19(49-6)10-23(27)41)12-24(28)53-36-31(50-18(5)39)30(43)29(42)25(13-38)54-36/h7-12,17,25,29-31,36,38,40-43H,13H2,1-6H3,(H,37,44)(H,45,46)/t17-,25+,29+,30-,31+,36+/m0/s1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| InChI Key | RBFOMTAWEHHDSX-SBCZIEDESA-N | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Spectra | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Predicted Spectra | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Chemical Shift Submissions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species of Origin |
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| Chemical Taxonomy | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Classification | Not classified | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Physical Properties | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| State | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Properties |
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| Predicted Properties |
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| External Links | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| NPAtlas ID | NPA017426 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HMDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| DrugBank ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Phenol Explorer Compound ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| FoodDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| KNApSAcK ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Chemspider ID | 78438361 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| KEGG Compound ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| BioCyc ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| BiGG ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Wikipedia Link | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| METLIN ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PubChem Compound | 44818802 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ChEBI ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Good Scents ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| References | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| General References | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
