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Record Information
Version1.0
Created at2020-12-09 06:07:03 UTC
Updated at2021-07-15 17:00:46 UTC
NP-MRD IDNP0008557
Secondary Accession NumbersNone
Natural Product Identification
Common NameIndoxamycin B
Provided ByNPAtlasNPAtlas Logo
Description Indoxamycin B is found in Streptomyces sp. It was first documented in 2009 (PMID: 19572603). Based on a literature review very few articles have been published on (2E)-3-[(1S,3R,4R,7R,8S,11S)-3-[(2Z)-but-2-en-2-yl]-8-(hydroxymethyl)-4,6,10,11-tetramethyl-2-oxatricyclo[5.3.1.0⁴,¹¹]Undeca-5,9-dien-8-yl]prop-2-enoic acid.
Structure
Thumb
Synonyms
ValueSource
(2E)-3-[(1S,3R,4R,7R,8S,11S)-3-[(2Z)-But-2-en-2-yl]-8-(hydroxymethyl)-4,6,10,11-tetramethyl-2-oxatricyclo[5.3.1.0,]undeca-5,9-dien-8-yl]prop-2-enoateGenerator
Chemical FormulaC22H30O4
Average Mass358.4780 Da
Monoisotopic Mass358.21441 Da
IUPAC Name(2E)-3-[(1S,3R,4R,7R,8S,11S)-3-[(2Z)-but-2-en-2-yl]-8-(hydroxymethyl)-4,6,10,11-tetramethyl-2-oxatricyclo[5.3.1.0^{4,11}]undeca-5,9-dien-8-yl]prop-2-enoic acid
Traditional Name(2E)-3-[(1S,3R,4R,7R,8S,11S)-3-[(2Z)-but-2-en-2-yl]-8-(hydroxymethyl)-4,6,10,11-tetramethyl-2-oxatricyclo[5.3.1.0^{4,11}]undeca-5,9-dien-8-yl]prop-2-enoic acid
CAS Registry NumberNot Available
SMILES
C\C=C(\C)[C@H]1O[C@H]2C(C)=C[C@@](CO)(\C=C\C(O)=O)[C@H]3C(C)=C[C@]1(C)[C@@]23C
InChI Identifier
InChI=1S/C22H30O4/c1-7-13(2)18-20(5)10-14(3)17-21(20,6)19(26-18)15(4)11-22(17,12-23)9-8-16(24)25/h7-11,17-19,23H,12H2,1-6H3,(H,24,25)/b9-8+,13-7-/t17-,18+,19-,20-,21+,22+/m0/s1
InChI KeyJBEJQFQKKHSILD-FXRSQJOKSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Streptomyces sp.NPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.08ALOGPS
logP2.97ChemAxon
logS-4.3ALOGPS
pKa (Strongest Acidic)4.62ChemAxon
pKa (Strongest Basic)-1.1ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area66.76 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity104.97 m³·mol⁻¹ChemAxon
Polarizability39.42 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA012290
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID27024346
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound101485065
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Sato S, Iwata F, Mukai T, Yamada S, Takeo J, Abe A, Kawahara H: Indoxamycins A-F. Cytotoxic tricycklic polypropionates from a marine-derived actinomycete. J Org Chem. 2009 Aug 7;74(15):5502-9. doi: 10.1021/jo900667j. [PubMed:19572603 ]