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Record Information
Version2.0
Created at2020-12-09 05:52:50 UTC
Updated at2021-07-15 16:59:50 UTC
NP-MRD IDNP0008236
Secondary Accession NumbersNone
Natural Product Identification
Common Name(+)-viridicatumtoxin B
Provided ByNPAtlasNPAtlas Logo
Description(1S,4'R,9'S)-4',8',9',12',14'-pentahydroxy-16'-methoxy-2,6,6-trimethyl-3',6',10'-trioxospiro[cyclohexane-1,18'-pentacyclo[11.6.1.0²,¹¹.0⁴,⁹.0¹⁷,²⁰]Icosane]-1'(20'),2,2'(11'),7',12',14',16'-heptaene-7'-carboximidic acid belongs to the class of organic compounds known as tetracyclines. These are polyketides having an octahydrotetracene-2-carboxamide skeleton, substituted with many hydroxy and other groups. (+)-viridicatumtoxin B is found in Penicillium. Based on a literature review very few articles have been published on (1S,4'R,9'S)-4',8',9',12',14'-pentahydroxy-16'-methoxy-2,6,6-trimethyl-3',6',10'-trioxospiro[cyclohexane-1,18'-pentacyclo[11.6.1.0²,¹¹.0⁴,⁹.0¹⁷,²⁰]Icosane]-1'(20'),2,2'(11'),7',12',14',16'-heptaene-7'-carboximidic acid.
Structure
Thumb
Synonyms
ValueSource
(1S,4'r,9's)-4',8',9',12',14'-Pentahydroxy-16'-methoxy-2,6,6-trimethyl-3',6',10'-trioxospiro[cyclohexane-1,18'-pentacyclo[11.6.1.0,.0,.0,]icosane]-1'(20'),2,2'(11'),7',12',14',16'-heptaene-7'-carboximidateGenerator
Chemical FormulaC30H29NO10
Average Mass563.5590 Da
Monoisotopic Mass563.17915 Da
IUPAC Name(1S,4'R,9'S)-4',8',9',12',14'-pentahydroxy-16'-methoxy-2,6,6-trimethyl-3',6',10'-trioxospiro[cyclohexane-1,18'-pentacyclo[11.6.1.0^{2,11}.0^{4,9}.0^{17,20}]icosane]-1',2,7',11',13',15',17'(20')-heptaene-7'-carboxamide
Traditional Name(1S,4'R,9'S)-4',8',9',12',14'-pentahydroxy-16'-methoxy-2,6,6-trimethyl-3',6',10'-trioxospiro[cyclohexane-1,18'-pentacyclo[11.6.1.0^{2,11}.0^{4,9}.0^{17,20}]icosane]-1',2,7',11',13',15',17'(20')-heptaene-7'-carboxamide
CAS Registry NumberNot Available
SMILES
COC1=CC(O)=C2C3=C1[C@]1(CC3=C3C(=O)[C@@]4(O)CC(=O)C(C(N)=O)=C(O)[C@@]4(O)C(=O)C3=C2O)C(C)=CCCC1(C)C
InChI Identifier
InChI=1S/C30H29NO10/c1-11-6-5-7-27(2,3)28(11)9-12-16-18(13(32)8-15(41-4)21(16)28)22(34)20-17(12)23(35)29(39)10-14(33)19(26(31)38)24(36)30(29,40)25(20)37/h6,8,32,34,36,39-40H,5,7,9-10H2,1-4H3,(H2,31,38)/t28-,29-,30+/m0/s1
InChI KeyWUFPHUQCGWRGKE-OIFRRMEBSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
PenicilliumNPAtlas
Chemical Taxonomy
Description Belongs to the class of organic compounds known as tetracyclines. These are polyketides having an octahydrotetracene-2-carboxamide skeleton, substituted with many hydroxy and other groups.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassTetracyclines
Sub ClassNot Available
Direct ParentTetracyclines
Alternative Parents
Substituents
  • Tetracycline
  • Tetracenequinone
  • Anthracene carboxylic acid or derivatives
  • 9,10-anthraquinone
  • 1,4-anthraquinone
  • 1-naphthol
  • Tetralin
  • Naphthalene
  • Quinone
  • Phenol ether
  • Anisole
  • Aryl alkyl ketone
  • Aryl ketone
  • Phenol
  • Cyclohexenone
  • Alkyl aryl ether
  • 1-hydroxy-2-unsubstituted benzenoid
  • Benzenoid
  • Tertiary alcohol
  • Vinylogous acid
  • Primary carboxylic acid amide
  • Carboxamide group
  • Cyclic ketone
  • 1,2-diol
  • Ketone
  • Polyol
  • Carboxylic acid derivative
  • Enol
  • Ether
  • Carbonyl group
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organonitrogen compound
  • Alcohol
  • Organic nitrogen compound
  • Organic oxygen compound
  • Aromatic homopolycyclic compound
Molecular FrameworkAromatic homopolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.91ALOGPS
logP1.76ChemAxon
logS-4.2ALOGPS
pKa (Strongest Acidic)1.77ChemAxon
pKa (Strongest Basic)-1.5ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count6ChemAxon
Polar Surface Area204.68 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity146.28 m³·mol⁻¹ChemAxon
Polarizability56.17 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA015742
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78441369
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound72204240
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References