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Record Information
Version1.0
Created at2020-12-09 05:35:11 UTC
Updated at2021-07-15 16:59:04 UTC
NP-MRD IDNP0007971
Secondary Accession NumbersNone
Natural Product Identification
Common NameEujavanicin A
Provided ByNPAtlasNPAtlas Logo
Description2-[(3S,6S,9S,12S,15S,18S,21S,24S,27R,33aS)-12,15-bis[(2S)-butan-2-yl]-9-(carboxymethyl)-4,16,22-trihydroxy-2,8,11,14,20,27-hexamethyl-24-(2-methylpropyl)-1,7,10,13,19,25,28-heptaoxo-3,6,21-tris(propan-2-yl)-1H,2H,3H,6H,7H,8H,9H,10H,11H,12H,13H,14H,15H,18H,19H,20H,21H,24H,25H,27H,28H,30H,31H,32H,33H,33aH-pyrido[1,2-d]1-oxa-4,7,10,13,16,19,22,25,28-nonaazacyclotriacontan-18-yl]acetic acid belongs to the class of organic compounds known as cyclic depsipeptides. These are natural or synthetic compounds having sequences of amino and hydroxy carboxylic acid residues (usually α-amino and α-hydroxy acids) connected in a ring. The residues are commonly but not necessarily regularly alternating. Eujavanicin A is found in Penicillium javanicum. It was first documented in 2008 (PMID: 18771240). Based on a literature review very few articles have been published on 2-[(3S,6S,9S,12S,15S,18S,21S,24S,27R,33aS)-12,15-bis[(2S)-butan-2-yl]-9-(carboxymethyl)-4,16,22-trihydroxy-2,8,11,14,20,27-hexamethyl-24-(2-methylpropyl)-1,7,10,13,19,25,28-heptaoxo-3,6,21-tris(propan-2-yl)-1H,2H,3H,6H,7H,8H,9H,10H,11H,12H,13H,14H,15H,18H,19H,20H,21H,24H,25H,27H,28H,30H,31H,32H,33H,33aH-pyrido[1,2-d]1-oxa-4,7,10,13,16,19,22,25,28-nonaazacyclotriacontan-18-yl]acetic acid.
Structure
Thumb
Synonyms
ValueSource
2-[(3S,6S,9S,12S,15S,18S,21S,24S,27R,33AS)-12,15-bis[(2S)-butan-2-yl]-9-(carboxymethyl)-4,16,22-trihydroxy-2,8,11,14,20,27-hexamethyl-24-(2-methylpropyl)-1,7,10,13,19,25,28-heptaoxo-3,6,21-tris(propan-2-yl)-1H,2H,3H,6H,7H,8H,9H,10H,11H,12H,13H,14H,15H,18H,19H,20H,21H,24H,25H,27H,28H,30H,31H,32H,33H,33ah-pyrido[1,2-D]1-oxa-4,7,10,13,16,19,22,25,28-nonaazacyclotriacontan-18-yl]acetateGenerator
Chemical FormulaC55H93N9O15
Average Mass1120.3970 Da
Monoisotopic Mass1119.67911 Da
IUPAC Name2-[(3S,6S,9S,15S,18S,21S,24S,27R,33aS)-12,15-bis[(2S)-butan-2-yl]-9-(carboxymethyl)-2,8,11,14,20,27-hexamethyl-24-(2-methylpropyl)-1,4,7,10,13,16,19,22,25,28-decaoxo-3,6,21-tris(propan-2-yl)-dotriacontahydropyrido[1,2-d]1-oxa-4,7,10,13,16,19,22,25,28-nonaazacyclotriacontan-18-yl]acetic acid
Traditional Name[(3S,6S,9S,15S,18S,21S,24S,27R,33aS)-12,15-bis[(2S)-butan-2-yl]-9-(carboxymethyl)-3,6,21-triisopropyl-2,8,11,14,20,27-hexamethyl-24-(2-methylpropyl)-1,4,7,10,13,16,19,22,25,28-decaoxo-hexadecahydro-3H-pyrido[1,2-d]1-oxa-4,7,10,13,16,19,22,25,28-nonaazacyclotriacontan-18-yl]acetic acid
CAS Registry NumberNot Available
SMILES
CC[C@H](C)[C@@H]1N(C)C(=O)[C@H]([C@@H](C)CC)N(C)C(=O)[C@H](CC(O)=O)N(C)C(=O)[C@@H](NC(=O)[C@H](C(C)C)N(C)C(=O)[C@@H]2CCCCN2C(=O)[C@@H](C)OC(=O)[C@H](CC(C)C)NC(=O)[C@H](C(C)C)N(C)C(=O)[C@H](CC(O)=O)NC1=O)C(C)C
InChI Identifier
InChI=1S/C55H93N9O15/c1-19-32(11)44-48(71)56-35(26-39(65)66)50(73)60(15)42(30(7)8)46(69)57-36(25-28(3)4)55(78)79-34(13)49(72)64-24-22-21-23-37(64)51(74)61(16)43(31(9)10)47(70)58-41(29(5)6)53(76)59(14)38(27-40(67)68)52(75)63(18)45(33(12)20-2)54(77)62(44)17/h28-38,41-45H,19-27H2,1-18H3,(H,56,71)(H,57,69)(H,58,70)(H,65,66)(H,67,68)/t32-,33-,34+,35-,36-,37-,38-,41-,42-,43-,44-,45-/m0/s1
InChI KeyANDYWVPENXNSGK-NHHJTUBUSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Penicillium javanicumNPAtlas
Chemical Taxonomy
Description Belongs to the class of organic compounds known as cyclic depsipeptides. These are natural or synthetic compounds having sequences of amino and hydroxy carboxylic acid residues (usually α-amino and α-hydroxy acids) connected in a ring. The residues are commonly but not necessarily regularly alternating.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassPeptidomimetics
Sub ClassDepsipeptides
Direct ParentCyclic depsipeptides
Alternative Parents
Substituents
  • Cyclic depsipeptide
  • Macrolide lactam
  • Alpha-amino acid ester
  • Macrolactam
  • Macrolide
  • Alpha-amino acid or derivatives
  • Tricarboxylic acid or derivatives
  • Piperidine
  • Cyclic carboximidic acid
  • Tertiary carboxylic acid amide
  • Carboxamide group
  • Carboxylic acid ester
  • Lactam
  • Lactone
  • Carboxylic acid derivative
  • Carboxylic acid
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Organic 1,3-dipolar compound
  • Propargyl-type 1,3-dipolar organic compound
  • Polyol
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Carbonyl group
  • Organopnictogen compound
  • Organic oxide
  • Organonitrogen compound
  • Organooxygen compound
  • Organic nitrogen compound
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP2.47ALOGPS
logP2.5ChemAxon
logS-4.8ALOGPS
pKa (Strongest Acidic)3.99ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count14ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area310.06 ŲChemAxon
Rotatable Bond Count13ChemAxon
Refractivity287.72 m³·mol⁻¹ChemAxon
Polarizability119.24 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA014910
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78438064
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139587259
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Nakadate S, Nozawa K, Sato H, Horie H, Fujii Y, Nagai M, Hosoe T, Kawai K, Yaguchi T: Antifungal cyclic depsipeptide, eujavanicin A, isolated from Eupenicillium javanicum. J Nat Prod. 2008 Sep;71(9):1640-2. doi: 10.1021/np8002904. Epub 2008 Sep 4. [PubMed:18771240 ]