NP-MRD: Showing NP-Card for Sterenin B (NP0007772)

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Record Information

Version

2.0

Created at

2020-12-09 04:33:45 UTC

Updated at

2021-07-15 16:58:30 UTC

NP-MRD ID

NP0007772

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Sterenin B

Provided By

NPAtlas

Description

Sterenin B is found in Stereum. Based on a literature review very few articles have been published on 2-[6-(2,4-dihydroxy-6-methylbenzoyloxy)-4-hydroxy-5-(3-methylbut-2-en-1-yl)-1-oxo-2,3-dihydro-1H-isoindol-2-yl]butanedioic acid.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242119033D          

 61 63  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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M  END


  Mrv1652306242119033D          

 61 63  0  0  0  0            999 V2000
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    3.5032    0.1995    0.5413 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.9965   -0.8550   -0.2892 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.3956   -1.2132   -0.4228 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.0090   -1.6145    0.8725 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.4198   -1.9675    0.6710 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3100   -1.1242    0.8934 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.7513   -3.2331    0.2358 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1246   -0.0871   -1.0320 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5210    0.9670   -1.3291 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.4841   -0.0985   -1.3175 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9044   -1.4967   -0.9220 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9211   -2.4608   -1.7363 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9619    5.5318    0.0367 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3237    5.5299   -0.7852 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6201    4.3756   -1.2809 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0895    4.3470    1.6925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3527    3.9183    2.7368 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2143    5.5294    1.9387 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2680    2.2958   -0.5457 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8674    2.0117    2.2163 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2055    0.9614    1.6457 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2257   -0.7845   -2.4283 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -6.5595   -1.0701   -2.1484 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7898   -2.1980   -0.2842 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6035   -3.7182    1.2381 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3341   -3.3294    2.3700 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1022   -1.8809   -1.4688 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3565    2.0846    2.0596 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8212    0.0679    1.6082 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8457    1.1912    0.1652 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4546   -2.1137   -1.1044 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5210   -2.5135    1.3169 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8866   -0.8125    1.6552 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4797   -3.6378   -0.6308 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0899    0.6898   -1.1595 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  2  4  2  3  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 15 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
  7 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 22 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  2  0  0  0  0
 29 31  1  0  0  0  0
 27 32  1  0  0  0  0
 32 33  2  0  0  0  0
 32 34  1  0  0  0  0
 26 35  1  0  0  0  0
 35 36  2  0  0  0  0
 23  6  1  0  0  0  0
 18 11  1  0  0  0  0
 35 21  1  0  0  0  0
  1 37  1  0  0  0  0
  1 38  1  0  0  0  0
  1 39  1  0  0  0  0
  3 40  1  0  0  0  0
  3 41  1  0  0  0  0
  3 42  1  0  0  0  0
  4 43  1  0  0  0  0
  5 44  1  0  0  0  0
  5 45  1  0  0  0  0
 13 46  1  0  0  0  0
 13 47  1  0  0  0  0
 13 48  1  0  0  0  0
 14 49  1  0  0  0  0
 16 50  1  0  0  0  0
 17 51  1  0  0  0  0
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 24 54  1  0  0  0  0
 25 55  1  0  0  0  0
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 27 57  1  6  0  0  0
 28 58  1  0  0  0  0
 28 59  1  0  0  0  0
 31 60  1  0  0  0  0
 34 61  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0007772

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC(=O)C([H])([H])[C@@]([H])(N1C(=O)C2=C([H])C(OC(=O)C3=C(C([H])=C(O[H])C([H])=C3O[H])C([H])([H])[H])=C(C(O[H])=C2C1([H])[H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H])C(=O)O[H]

> <INCHI_IDENTIFIER>
InChI=1S/C25H25NO10/c1-11(2)4-5-14-19(36-25(35)21-12(3)6-13(27)7-18(21)28)8-15-16(22(14)31)10-26(23(15)32)17(24(33)34)9-20(29)30/h4,6-8,17,27-28,31H,5,9-10H2,1-3H3,(H,29,30)(H,33,34)/t17-/m1/s1

> <INCHI_KEY>
NZNOTOIOKOCXIB-UHFFFAOYSA-N

> <FORMULA>
C25H25NO10

> <MOLECULAR_WEIGHT>
499.472

> <EXACT_MASS>
499.147846009

> <JCHEM_ACCEPTOR_COUNT>
9

> <JCHEM_ATOM_COUNT>
61

> <JCHEM_AVERAGE_POLARIZABILITY>
50.78293665730272

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2R)-2-[6-(2,4-dihydroxy-6-methylbenzoyloxy)-4-hydroxy-5-(3-methylbut-2-en-1-yl)-1-oxo-2,3-dihydro-1H-isoindol-2-yl]butanedioic acid

> <ALOGPS_LOGP>
2.63

> <JCHEM_LOGP>
4.0701290199999995

> <ALOGPS_LOGS>
-4.29

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-2

> <JCHEM_PKA>
4.688405877620467

> <JCHEM_PKA_STRONGEST_ACIDIC>
2.8254067674454073

> <JCHEM_PKA_STRONGEST_BASIC>
-4.006418645472089

> <JCHEM_POLAR_SURFACE_AREA>
181.9

> <JCHEM_REFRACTIVITY>
127.12789999999995

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.56e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2R)-2-[6-(2,4-dihydroxy-6-methylbenzoyloxy)-4-hydroxy-5-(3-methylbut-2-en-1-yl)-1-oxo-3H-isoindol-2-yl]butanedioic acid

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 61 63  0  0  0  0  0  0  0  0999 V2000
   -2.1659    4.9017   -0.3989 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.7685   -1.2298   -1.0498 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0612   -0.2694   -1.9354 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0903   -1.5579   -1.2864 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7628   -2.4418   -0.4839 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.7557   -2.7101    0.8620 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.3439   -1.0801   -0.7725 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6927   -0.8350   -0.4625 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0349    0.1592    0.4053 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0144    0.9254    0.9763 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3902    1.9297    1.8551 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5032    0.1995    0.5413 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9965   -0.8550   -0.2892 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.3956   -1.2132   -0.4228 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.0090   -1.6145    0.8725 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4198   -1.9675    0.6710 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3100   -1.1242    0.8934 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.7513   -3.2331    0.2358 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1246   -0.0871   -1.0320 C   0  0  0  0  0  0  0  0  0  0  0  0
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    7.4841   -0.0985   -1.3175 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9044   -1.4967   -0.9220 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9211   -2.4608   -1.7363 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9619    5.5318    0.0367 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3237    5.5299   -0.7852 H   0  0  0  0  0  0  0  0  0  0  0  0
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    0.0895    4.3470    1.6925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3527    3.9183    2.7368 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2143    5.5294    1.9387 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2680    2.2958   -0.5457 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8674    2.0117    2.2163 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2055    0.9614    1.6457 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2257   -0.7845   -2.4283 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7741    0.1220   -2.7228 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7053    0.6367   -1.4240 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5595   -1.0701   -2.1484 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7898   -2.1980   -0.2842 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6035   -3.7182    1.2381 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3341   -3.3294    2.3700 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1022   -1.8809   -1.4688 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3565    2.0846    2.0596 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8212    0.0679    1.6082 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8457    1.1912    0.1652 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4546   -2.1137   -1.1044 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5210   -2.5135    1.3169 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8866   -0.8125    1.6552 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4797   -3.6378   -0.6308 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0899    0.6898   -1.1595 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  2  3
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
 11 12  2  0
 12 13  1  0
 12 14  1  0
 14 15  2  0
 15 16  1  0
 15 17  1  0
 17 18  2  0
 18 19  1  0
  7 20  1  0
 20 21  2  0
 21 22  1  0
 22 23  2  0
 23 24  1  0
 22 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  2  0
 29 31  1  0
 27 32  1  0
 32 33  2  0
 32 34  1  0
 26 35  1  0
 35 36  2  0
 23  6  1  0
 18 11  1  0
 35 21  1  0
  1 37  1  0
  1 38  1  0
  1 39  1  0
  3 40  1  0
  3 41  1  0
  3 42  1  0
  4 43  1  0
  5 44  1  0
  5 45  1  0
 13 46  1  0
 13 47  1  0
 13 48  1  0
 14 49  1  0
 16 50  1  0
 17 51  1  0
 19 52  1  0
 20 53  1  0
 24 54  1  0
 25 55  1  0
 25 56  1  0
 27 57  1  6
 28 58  1  0
 28 59  1  0
 31 60  1  0
 34 61  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0      -2.166   4.902  -0.399  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.663   3.906   0.597  0.00  0.00           C+0
HETATM    3  C   UNK     0      -1.016   4.444   1.831  0.00  0.00           C+0
HETATM    4  C   UNK     0      -1.793   2.609   0.372  0.00  0.00           C+0
HETATM    5  C   UNK     0      -1.317   1.565   1.317  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.306   0.679   0.667  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.654  -0.319  -0.204  0.00  0.00           C+0
HETATM    8  O   UNK     0      -1.984  -0.573  -0.518  0.00  0.00           O+0
HETATM    9  C   UNK     0      -2.719  -1.468   0.266  0.00  0.00           C+0
HETATM   10  O   UNK     0      -2.110  -1.979   1.217  0.00  0.00           O+0
HETATM   11  C   UNK     0      -4.113  -1.807   0.020  0.00  0.00           C+0
HETATM   12  C   UNK     0      -4.769  -1.230  -1.050  0.00  0.00           C+0
HETATM   13  C   UNK     0      -4.061  -0.269  -1.935  0.00  0.00           C+0
HETATM   14  C   UNK     0      -6.090  -1.558  -1.286  0.00  0.00           C+0
HETATM   15  C   UNK     0      -6.763  -2.442  -0.484  0.00  0.00           C+0
HETATM   16  O   UNK     0      -8.083  -2.764  -0.727  0.00  0.00           O+0
HETATM   17  C   UNK     0      -6.101  -3.002   0.567  0.00  0.00           C+0
HETATM   18  C   UNK     0      -4.756  -2.710   0.862  0.00  0.00           C+0
HETATM   19  O   UNK     0      -4.194  -3.332   1.943  0.00  0.00           O+0
HETATM   20  C   UNK     0       0.344  -1.080  -0.773  0.00  0.00           C+0
HETATM   21  C   UNK     0       1.693  -0.835  -0.463  0.00  0.00           C+0
HETATM   22  C   UNK     0       2.035   0.159   0.405  0.00  0.00           C+0
HETATM   23  C   UNK     0       1.014   0.925   0.976  0.00  0.00           C+0
HETATM   24  O   UNK     0       1.390   1.930   1.855  0.00  0.00           O+0
HETATM   25  C   UNK     0       3.503   0.200   0.541  0.00  0.00           C+0
HETATM   26  N   UNK     0       3.997  -0.855  -0.289  0.00  0.00           N+0
HETATM   27  C   UNK     0       5.396  -1.213  -0.423  0.00  0.00           C+0
HETATM   28  C   UNK     0       6.009  -1.615   0.873  0.00  0.00           C+0
HETATM   29  C   UNK     0       7.420  -1.968   0.671  0.00  0.00           C+0
HETATM   30  O   UNK     0       8.310  -1.124   0.893  0.00  0.00           O+0
HETATM   31  O   UNK     0       7.751  -3.233   0.236  0.00  0.00           O+0
HETATM   32  C   UNK     0       6.125  -0.087  -1.032  0.00  0.00           C+0
HETATM   33  O   UNK     0       5.521   0.967  -1.329  0.00  0.00           O+0
HETATM   34  O   UNK     0       7.484  -0.099  -1.317  0.00  0.00           O+0
HETATM   35  C   UNK     0       2.904  -1.497  -0.922  0.00  0.00           C+0
HETATM   36  O   UNK     0       2.921  -2.461  -1.736  0.00  0.00           O+0
HETATM   37  H   UNK     0      -2.962   5.532   0.037  0.00  0.00           H+0
HETATM   38  H   UNK     0      -1.324   5.530  -0.785  0.00  0.00           H+0
HETATM   39  H   UNK     0      -2.620   4.376  -1.281  0.00  0.00           H+0
HETATM   40  H   UNK     0       0.090   4.347   1.692  0.00  0.00           H+0
HETATM   41  H   UNK     0      -1.353   3.918   2.737  0.00  0.00           H+0
HETATM   42  H   UNK     0      -1.214   5.529   1.939  0.00  0.00           H+0
HETATM   43  H   UNK     0      -2.268   2.296  -0.546  0.00  0.00           H+0
HETATM   44  H   UNK     0      -0.867   2.012   2.216  0.00  0.00           H+0
HETATM   45  H   UNK     0      -2.205   0.961   1.646  0.00  0.00           H+0
HETATM   46  H   UNK     0      -3.226  -0.785  -2.428  0.00  0.00           H+0
HETATM   47  H   UNK     0      -4.774   0.122  -2.723  0.00  0.00           H+0
HETATM   48  H   UNK     0      -3.705   0.637  -1.424  0.00  0.00           H+0
HETATM   49  H   UNK     0      -6.559  -1.070  -2.148  0.00  0.00           H+0
HETATM   50  H   UNK     0      -8.790  -2.198  -0.284  0.00  0.00           H+0
HETATM   51  H   UNK     0      -6.604  -3.718   1.238  0.00  0.00           H+0
HETATM   52  H   UNK     0      -3.334  -3.329   2.370  0.00  0.00           H+0
HETATM   53  H   UNK     0       0.102  -1.881  -1.469  0.00  0.00           H+0
HETATM   54  H   UNK     0       2.357   2.085   2.060  0.00  0.00           H+0
HETATM   55  H   UNK     0       3.821   0.068   1.608  0.00  0.00           H+0
HETATM   56  H   UNK     0       3.846   1.191   0.165  0.00  0.00           H+0
HETATM   57  H   UNK     0       5.455  -2.114  -1.104  0.00  0.00           H+0
HETATM   58  H   UNK     0       5.521  -2.514   1.317  0.00  0.00           H+0
HETATM   59  H   UNK     0       5.887  -0.813   1.655  0.00  0.00           H+0
HETATM   60  H   UNK     0       7.480  -3.638  -0.631  0.00  0.00           H+0
HETATM   61  H   UNK     0       8.090   0.690  -1.159  0.00  0.00           H+0
CONECT    1    2   37   38   39                                             
CONECT    2    1    3    4                                                  
CONECT    3    2   40   41   42                                             
CONECT    4    2    5   43                                                  
CONECT    5    4    6   44   45                                             
CONECT    6    5    7   23                                                  
CONECT    7    6    8   20                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12   18                                                  
CONECT   12   11   13   14                                                  
CONECT   13   12   46   47   48                                             
CONECT   14   12   15   49                                                  
CONECT   15   14   16   17                                                  
CONECT   16   15   50                                                       
CONECT   17   15   18   51                                                  
CONECT   18   17   19   11                                                  
CONECT   19   18   52                                                       
CONECT   20    7   21   53                                                  
CONECT   21   20   22   35                                                  
CONECT   22   21   23   25                                                  
CONECT   23   22   24    6                                                  
CONECT   24   23   54                                                       
CONECT   25   22   26   55   56                                             
CONECT   26   25   27   35                                                  
CONECT   27   26   28   32   57                                             
CONECT   28   27   29   58   59                                             
CONECT   29   28   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29   60                                                       
CONECT   32   27   33   34                                                  
CONECT   33   32                                                            
CONECT   34   32   61                                                       
CONECT   35   26   36   21                                                  
CONECT   36   35                                                            
CONECT   37    1                                                            
CONECT   38    1                                                            
CONECT   39    1                                                            
CONECT   40    3                                                            
CONECT   41    3                                                            
CONECT   42    3                                                            
CONECT   43    4                                                            
CONECT   44    5                                                            
CONECT   45    5                                                            
CONECT   46   13                                                            
CONECT   47   13                                                            
CONECT   48   13                                                            
CONECT   49   14                                                            
CONECT   50   16                                                            
CONECT   51   17                                                            
CONECT   52   19                                                            
CONECT   53   20                                                            
CONECT   54   24                                                            
CONECT   55   25                                                            
CONECT   56   25                                                            
CONECT   57   27                                                            
CONECT   58   28                                                            
CONECT   59   28                                                            
CONECT   60   31                                                            
CONECT   61   34                                                            
MASTER        0    0    0    0    0    0    0    0   61    0  126    0
END

RDKit          3D

61 63  0  0  0  0  0  0  0  0999 V2000
   -2.1659    4.9017   -0.3989 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6626    3.9059    0.5970 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0157    4.4440    1.8310 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7934    2.6094    0.3723 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3174    1.5648    1.3169 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3062    0.6785    0.6667 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6543   -0.3193   -0.2042 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9837   -0.5733   -0.5175 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7187   -1.4675    0.2663 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1099   -1.9792    1.2166 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1133   -1.8071    0.0201 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7685   -1.2298   -1.0498 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0612   -0.2694   -1.9354 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0903   -1.5579   -1.2864 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7628   -2.4418   -0.4839 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0832   -2.7644   -0.7267 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1015   -3.0025    0.5674 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7557   -2.7101    0.8620 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1939   -3.3315    1.9427 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3439   -1.0801   -0.7725 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6927   -0.8350   -0.4625 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0349    0.1592    0.4053 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0144    0.9254    0.9763 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3902    1.9297    1.8551 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5032    0.1995    0.5413 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9965   -0.8550   -0.2892 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.3956   -1.2132   -0.4228 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.0090   -1.6145    0.8725 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4198   -1.9675    0.6710 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3100   -1.1242    0.8934 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.7513   -3.2331    0.2358 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1246   -0.0871   -1.0320 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5210    0.9670   -1.3291 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.4841   -0.0985   -1.3175 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9044   -1.4967   -0.9220 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9211   -2.4608   -1.7363 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9619    5.5318    0.0367 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3237    5.5299   -0.7852 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6201    4.3756   -1.2809 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0895    4.3470    1.6925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3527    3.9183    2.7368 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2143    5.5294    1.9387 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2680    2.2958   -0.5457 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8674    2.0117    2.2163 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2055    0.9614    1.6457 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2257   -0.7845   -2.4283 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7741    0.1220   -2.7228 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7053    0.6367   -1.4240 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5595   -1.0701   -2.1484 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7898   -2.1980   -0.2842 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6035   -3.7182    1.2381 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3341   -3.3294    2.3700 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1022   -1.8809   -1.4688 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3565    2.0846    2.0596 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8212    0.0679    1.6082 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8457    1.1912    0.1652 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4546   -2.1137   -1.1044 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5210   -2.5135    1.3169 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8866   -0.8125    1.6552 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4797   -3.6378   -0.6308 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0899    0.6898   -1.1595 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  2  3
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
 11 12  2  0
 12 13  1  0
 12 14  1  0
 14 15  2  0
 15 16  1  0
 15 17  1  0
 17 18  2  0
 18 19  1  0
  7 20  1  0
 20 21  2  0
 21 22  1  0
 22 23  2  0
 23 24  1  0
 22 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  2  0
 29 31  1  0
 27 32  1  0
 32 33  2  0
 32 34  1  0
 26 35  1  0
 35 36  2  0
 23  6  1  0
 18 11  1  0
 35 21  1  0
  1 37  1  0
  1 38  1  0
  1 39  1  0
  3 40  1  0
  3 41  1  0
  3 42  1  0
  4 43  1  0
  5 44  1  0
  5 45  1  0
 13 46  1  0
 13 47  1  0
 13 48  1  0
 14 49  1  0
 16 50  1  0
 17 51  1  0
 19 52  1  0
 20 53  1  0
 24 54  1  0
 25 55  1  0
 25 56  1  0
 27 57  1  6
 28 58  1  0
 28 59  1  0
 31 60  1  0
 34 61  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
2-[6-(2,4-Dihydroxy-6-methylbenzoyloxy)-4-hydroxy-5-(3-methylbut-2-en-1-yl)-1-oxo-2,3-dihydro-1H-isoindol-2-yl]butanedioate	Generator

Chemical Formula

C₂₅H₂₅NO₁₀

Average Mass

499.4720 Da

Monoisotopic Mass

499.14785 Da

IUPAC Name

(2R)-2-[6-(2,4-dihydroxy-6-methylbenzoyloxy)-4-hydroxy-5-(3-methylbut-2-en-1-yl)-1-oxo-2,3-dihydro-1H-isoindol-2-yl]butanedioic acid

Traditional Name

(2R)-2-[6-(2,4-dihydroxy-6-methylbenzoyloxy)-4-hydroxy-5-(3-methylbut-2-en-1-yl)-1-oxo-3H-isoindol-2-yl]butanedioic acid

CAS Registry Number

Not Available

SMILES

CC(C)=CCC1=C(OC(=O)C2=C(O)C=C(O)C=C2C)C=C2C(=O)N(CC2=C1O)C(CC(O)=O)C(O)=O

InChI Identifier

InChI=1S/C25H25NO10/c1-11(2)4-5-14-19(36-25(35)21-12(3)6-13(27)7-18(21)28)8-15-16(22(14)31)10-26(23(15)32)17(24(33)34)9-20(29)30/h4,6-8,17,27-28,31H,5,9-10H2,1-3H3,(H,29,30)(H,33,34)

InChI Key

NZNOTOIOKOCXIB-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Stereum	NPAtlas	18503190

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.63	ALOGPS
logP	4.07	ChemAxon
logS	-4.3	ALOGPS
pKa (Strongest Acidic)	2.83	ChemAxon
pKa (Strongest Basic)	-4	ChemAxon
Physiological Charge	-2	ChemAxon
Hydrogen Acceptor Count	9	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	181.9 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	127.13 m³·mol⁻¹	ChemAxon
Polarizability	50.78 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

NPAtlas ID

NPA009165

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78434836

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101839869

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for Sterenin B (NP0007772)

MOL for NP0007772 (Sterenin B)

3D MOL for NP0007772 (Sterenin B)

3D SDF for NP0007772 (Sterenin B)

3D-SDF for NP0007772 (Sterenin B)

PDB for NP0007772 (Sterenin B)

3D PDB for NP0007772 (Sterenin B)

SMILES for NP0007772 (Sterenin B)

INCHI for NP0007772 (Sterenin B)

Structure for NP0007772 (Sterenin B)

3D Structure for NP0007772 (Sterenin B)