NP-MRD: Showing NP-Card for Phoslactomycin E (NP0007575)

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Record Information

Version

2.0

Created at

2020-12-09 04:25:13 UTC

Updated at

2021-07-15 16:57:57 UTC

NP-MRD ID

NP0007575

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Phoslactomycin E

Provided By

NPAtlas

Description

Phoslactomycin E is found in Streptomyces and Streptomyces nigrescens SC-273. Phoslactomycin E was first documented in 2007 (PMID: 18277002). Based on a literature review very few articles have been published on {[3-(2-aminoethyl)-10-[3-(cyclohexanecarbonyloxy)cyclohexyl]-1-(3-ethyl-6-oxo-3,6-dihydro-2H-pyran-2-yl)-3,6-dihydroxydeca-1,7,9-trien-4-yl]oxy}phosphonic acid.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652307012119523D          

 94 96  0  0  0  0            999 V2000
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  1  2  1  0  0  0  0
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M  END

     RDKit          3D

 94 96  0  0  0  0  0  0  0  0999 V2000
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M  END


  Mrv1652307012119523D          

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M  END
> <DATABASE_ID>
NP0007575

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@]([H])(C(\[H])=C(/[H])\C(\[H])=C(\[H])[C@]1([H])C([H])([H])C([H])([H])C([H])([H])[C@]([H])(OC(=O)C2([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C2([H])[H])C1([H])[H])C([H])([H])[C@]([H])(O[P](=O)(O[H])O[H])[C@@](O[H])(C(\[H])=C(\[H])[C@@]1([H])OC(=O)C([H])=C([H])[C@]1([H])C([H])([H])C([H])([H])[H])C([H])([H])C([H])([H])N([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C32H50NO10P/c1-2-24-15-16-30(35)42-28(24)17-18-32(37,19-20-33)29(43-44(38,39)40)22-26(34)13-7-6-9-23-10-8-14-27(21-23)41-31(36)25-11-4-3-5-12-25/h6-7,9,13,15-18,23-29,34,37H,2-5,8,10-12,14,19-22,33H2,1H3,(H2,38,39,40)/b9-6-,13-7+,18-17-/t23-,24+,26-,27+,28-,29+,32-/m1/s1

> <INCHI_KEY>
VPPYLHODJVARBC-UHFFFAOYSA-N

> <FORMULA>
C32H50NO10P

> <MOLECULAR_WEIGHT>
639.723

> <EXACT_MASS>
639.317233812

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
94

> <JCHEM_AVERAGE_POLARIZABILITY>
69.32869760190059

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
{[(1Z,3S,4S,6S,7E,9Z)-3-(2-aminoethyl)-10-[(1R,3S)-3-(cyclohexanecarbonyloxy)cyclohexyl]-1-[(2R,3S)-3-ethyl-6-oxo-3,6-dihydro-2H-pyran-2-yl]-3,6-dihydroxydeca-1,7,9-trien-4-yl]oxy}phosphonic acid

> <ALOGPS_LOGP>
3.06

> <JCHEM_LOGP>
2.8563573541474763

> <ALOGPS_LOGS>
-5.16

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
6.551991520935813

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.522770279306357

> <JCHEM_PKA_STRONGEST_BASIC>
9.807781676239106

> <JCHEM_POLAR_SURFACE_AREA>
185.83999999999997

> <JCHEM_REFRACTIVITY>
169.72279999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
16

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
4.43e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
[(1Z,3S,4S,6S,7E,9Z)-3-(2-aminoethyl)-10-[(1R,3S)-3-(cyclohexanecarbonyloxy)cyclohexyl]-1-[(2R,3S)-3-ethyl-6-oxo-2,3-dihydropyran-2-yl]-3,6-dihydroxydeca-1,7,9-trien-4-yl]oxyphosphonic acid

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 94 96  0  0  0  0  0  0  0  0999 V2000
  -10.6274    2.7166   -0.0691 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5526    1.8059    0.4275 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4617    1.7150   -0.5915 C   0  0  1  0  0  0  0  0  0  0  0  0
   -7.8924    3.0464   -0.8338 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8252    3.5449   -0.2347 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1463    2.7136    0.7513 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1277    3.1076    1.3669 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7115    1.4517    0.9588 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3491    0.7719   -0.1362 C   0  0  2  0  0  0  0  0  0  0  0  0
   -6.4323    0.5757   -1.2832 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3849   -0.2136   -1.3011 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9414   -1.0369   -0.1896 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.7913   -0.9792    0.8916 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8245   -2.5091   -0.5552 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1651   -2.9988   -0.9925 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1808   -2.8795    0.0174 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5903   -0.5192    0.3171 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.6437   -0.2688   -0.7869 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2856    0.2287   -0.4383 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6259    0.3952   -1.7034 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4789   -0.6357    0.4200 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8174   -0.7915    0.1638 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6354   -1.6439    1.0024 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9103   -1.8452    0.8117 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6992   -1.2330   -0.2854 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.2309   -2.3898   -1.1113 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1068   -3.2465   -0.2552 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1065   -2.4391    0.5454 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1207   -1.0494   -0.0434 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.2636   -0.3145    0.3309 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.2192    0.1301   -0.5463 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0189   -0.1642   -1.7713 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.4284    0.9106   -0.1296 C   0  0  2  0  0  0  0  0  0  0  0  0
    9.0614    2.2036    0.5443 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3162    2.8298    1.0739 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.5579    2.3700    0.3165 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.1955    2.3699   -1.1561 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2183    1.2611   -1.3845 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8359   -0.3774    0.2860 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2022   -1.3735    1.3170 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4815   -0.7437    2.8719 P   0  0  1  0  0  5  0  0  0  0  0  0
   -4.4080    0.4377    2.7478 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2416   -1.8959    3.8497 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0475   -0.2781    3.6173 O   0  0  0  0  0  0  0  0  0  0  0  0
  -10.7243    3.6089    0.5951 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.4107    3.0819   -1.0887 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.6135    2.1783   -0.0957 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9157    0.7769    0.6397 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.1512    2.1918    1.3841 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8649    1.2675   -1.5351 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3711    3.7084   -1.5695 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4620    4.5520   -0.4719 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7797   -0.1639    0.2485 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6295    1.1423   -2.2345 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7882   -0.2609   -2.2382 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7160   -1.7252    1.5111 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4451   -3.0459    0.3316 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1038   -2.6789   -1.3713 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4559   -2.4905   -1.9285 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0648   -4.0819   -1.2392 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1117   -2.9191   -0.4715 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1585   -3.7425    0.6256 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8737    0.4485    0.8325 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5522   -1.1403   -1.4974 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0926    0.5321   -1.4543 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3540    1.2654   -0.0425 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6970   -0.4875   -2.1552 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8878   -1.1577    1.2545 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2112   -0.2579   -0.6835 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1242   -2.1368    1.8410 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4064   -2.5192    1.5303 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0980   -0.6182   -0.9718 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6389   -2.1003   -2.0764 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3193   -3.0148   -1.3521 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4492   -3.8565    0.4034 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6999   -3.9834   -0.8395 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1460   -2.8345    0.4500 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8034   -2.4823    1.5911 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1836   -1.1690   -1.1458 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.0355    0.2878    0.5327 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3509    1.9945    1.3805 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5273    2.8613   -0.1618 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.2824    3.9446    1.0501 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.4592    2.4911    2.1192 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.3873    3.0760    0.4430 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.8031    1.3238    0.5820 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.8144    3.3505   -1.4981 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.1002    2.1504   -1.7590 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.6517    0.3698   -1.8604 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.4494    1.6554   -2.1112 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7567    0.6548   -0.1314 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6400   -0.2770    1.3669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0317   -1.5187    4.3190 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4055   -1.0111    3.6605 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  2  0
  5  6  1  0
  6  7  2  0
  6  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  1  1
 12 14  1  0
 14 15  1  0
 15 16  1  0
 12 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  1  0
 21 22  2  0
 22 23  1  0
 23 24  2  0
 24 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  1  0
 30 31  1  0
 31 32  2  0
 31 33  1  0
 33 34  1  0
 34 35  1  0
 35 36  1  0
 36 37  1  0
 37 38  1  0
 29 39  1  0
 17 40  1  0
 41 40  1  6
 41 42  2  0
 41 43  1  0
 41 44  1  0
  9  3  1  0
 39 25  1  0
 38 33  1  0
  1 45  1  0
  1 46  1  0
  1 47  1  0
  2 48  1  0
  2 49  1  0
  3 50  1  6
  4 51  1  0
  5 52  1  0
  9 53  1  1
 10 54  1  0
 11 55  1  0
 13 56  1  0
 14 57  1  0
 14 58  1  0
 15 59  1  0
 15 60  1  0
 16 61  1  0
 16 62  1  0
 17 63  1  1
 18 64  1  0
 18 65  1  0
 19 66  1  1
 20 67  1  0
 21 68  1  0
 22 69  1  0
 23 70  1  0
 24 71  1  0
 25 72  1  6
 26 73  1  0
 26 74  1  0
 27 75  1  0
 27 76  1  0
 28 77  1  0
 28 78  1  0
 29 79  1  6
 33 80  1  1
 34 81  1  0
 34 82  1  0
 35 83  1  0
 35 84  1  0
 36 85  1  0
 36 86  1  0
 37 87  1  0
 37 88  1  0
 38 89  1  0
 38 90  1  0
 39 91  1  0
 39 92  1  0
 43 93  1  0
 44 94  1  0
M  END

HEADER    PROTEIN                                 01-JUL-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   01-JUL-21         0                                  
HETATM    1  C   UNK     0     -10.627   2.717  -0.069  0.00  0.00           C+0
HETATM    2  C   UNK     0      -9.553   1.806   0.428  0.00  0.00           C+0
HETATM    3  C   UNK     0      -8.462   1.715  -0.592  0.00  0.00           C+0
HETATM    4  C   UNK     0      -7.892   3.046  -0.834  0.00  0.00           C+0
HETATM    5  C   UNK     0      -6.825   3.545  -0.235  0.00  0.00           C+0
HETATM    6  C   UNK     0      -6.146   2.714   0.751  0.00  0.00           C+0
HETATM    7  O   UNK     0      -5.128   3.108   1.367  0.00  0.00           O+0
HETATM    8  O   UNK     0      -6.712   1.452   0.959  0.00  0.00           O+0
HETATM    9  C   UNK     0      -7.349   0.772  -0.136  0.00  0.00           C+0
HETATM   10  C   UNK     0      -6.432   0.576  -1.283  0.00  0.00           C+0
HETATM   11  C   UNK     0      -5.385  -0.214  -1.301  0.00  0.00           C+0
HETATM   12  C   UNK     0      -4.941  -1.037  -0.190  0.00  0.00           C+0
HETATM   13  O   UNK     0      -5.791  -0.979   0.892  0.00  0.00           O+0
HETATM   14  C   UNK     0      -4.824  -2.509  -0.555  0.00  0.00           C+0
HETATM   15  C   UNK     0      -6.165  -2.999  -0.993  0.00  0.00           C+0
HETATM   16  N   UNK     0      -7.181  -2.880   0.017  0.00  0.00           N+0
HETATM   17  C   UNK     0      -3.590  -0.519   0.317  0.00  0.00           C+0
HETATM   18  C   UNK     0      -2.644  -0.269  -0.787  0.00  0.00           C+0
HETATM   19  C   UNK     0      -1.286   0.229  -0.438  0.00  0.00           C+0
HETATM   20  O   UNK     0      -0.626   0.395  -1.703  0.00  0.00           O+0
HETATM   21  C   UNK     0      -0.479  -0.636   0.420  0.00  0.00           C+0
HETATM   22  C   UNK     0       0.817  -0.792   0.164  0.00  0.00           C+0
HETATM   23  C   UNK     0       1.635  -1.644   1.002  0.00  0.00           C+0
HETATM   24  C   UNK     0       2.910  -1.845   0.812  0.00  0.00           C+0
HETATM   25  C   UNK     0       3.699  -1.233  -0.285  0.00  0.00           C+0
HETATM   26  C   UNK     0       4.231  -2.390  -1.111  0.00  0.00           C+0
HETATM   27  C   UNK     0       5.107  -3.247  -0.255  0.00  0.00           C+0
HETATM   28  C   UNK     0       6.106  -2.439   0.545  0.00  0.00           C+0
HETATM   29  C   UNK     0       6.121  -1.049  -0.043  0.00  0.00           C+0
HETATM   30  O   UNK     0       7.264  -0.315   0.331  0.00  0.00           O+0
HETATM   31  C   UNK     0       8.219   0.130  -0.546  0.00  0.00           C+0
HETATM   32  O   UNK     0       8.019  -0.164  -1.771  0.00  0.00           O+0
HETATM   33  C   UNK     0       9.428   0.911  -0.130  0.00  0.00           C+0
HETATM   34  C   UNK     0       9.061   2.204   0.544  0.00  0.00           C+0
HETATM   35  C   UNK     0      10.316   2.830   1.074  0.00  0.00           C+0
HETATM   36  C   UNK     0      11.558   2.370   0.317  0.00  0.00           C+0
HETATM   37  C   UNK     0      11.195   2.370  -1.156  0.00  0.00           C+0
HETATM   38  C   UNK     0      10.218   1.261  -1.385  0.00  0.00           C+0
HETATM   39  C   UNK     0       4.836  -0.377   0.286  0.00  0.00           C+0
HETATM   40  O   UNK     0      -3.202  -1.373   1.317  0.00  0.00           O+0
HETATM   41  P   UNK     0      -3.482  -0.744   2.872  0.00  0.00           P+0
HETATM   42  O   UNK     0      -4.408   0.438   2.748  0.00  0.00           O+0
HETATM   43  O   UNK     0      -4.242  -1.896   3.850  0.00  0.00           O+0
HETATM   44  O   UNK     0      -2.047  -0.278   3.617  0.00  0.00           O+0
HETATM   45  H   UNK     0     -10.724   3.609   0.595  0.00  0.00           H+0
HETATM   46  H   UNK     0     -10.411   3.082  -1.089  0.00  0.00           H+0
HETATM   47  H   UNK     0     -11.614   2.178  -0.096  0.00  0.00           H+0
HETATM   48  H   UNK     0      -9.916   0.777   0.640  0.00  0.00           H+0
HETATM   49  H   UNK     0      -9.151   2.192   1.384  0.00  0.00           H+0
HETATM   50  H   UNK     0      -8.865   1.268  -1.535  0.00  0.00           H+0
HETATM   51  H   UNK     0      -8.371   3.708  -1.569  0.00  0.00           H+0
HETATM   52  H   UNK     0      -6.462   4.552  -0.472  0.00  0.00           H+0
HETATM   53  H   UNK     0      -7.780  -0.164   0.249  0.00  0.00           H+0
HETATM   54  H   UNK     0      -6.630   1.142  -2.235  0.00  0.00           H+0
HETATM   55  H   UNK     0      -4.788  -0.261  -2.238  0.00  0.00           H+0
HETATM   56  H   UNK     0      -5.716  -1.725   1.511  0.00  0.00           H+0
HETATM   57  H   UNK     0      -4.445  -3.046   0.332  0.00  0.00           H+0
HETATM   58  H   UNK     0      -4.104  -2.679  -1.371  0.00  0.00           H+0
HETATM   59  H   UNK     0      -6.456  -2.490  -1.929  0.00  0.00           H+0
HETATM   60  H   UNK     0      -6.065  -4.082  -1.239  0.00  0.00           H+0
HETATM   61  H   UNK     0      -8.112  -2.919  -0.472  0.00  0.00           H+0
HETATM   62  H   UNK     0      -7.159  -3.743   0.626  0.00  0.00           H+0
HETATM   63  H   UNK     0      -3.874   0.449   0.833  0.00  0.00           H+0
HETATM   64  H   UNK     0      -2.552  -1.140  -1.497  0.00  0.00           H+0
HETATM   65  H   UNK     0      -3.093   0.532  -1.454  0.00  0.00           H+0
HETATM   66  H   UNK     0      -1.354   1.265  -0.043  0.00  0.00           H+0
HETATM   67  H   UNK     0      -0.697  -0.488  -2.155  0.00  0.00           H+0
HETATM   68  H   UNK     0      -0.888  -1.158   1.254  0.00  0.00           H+0
HETATM   69  H   UNK     0       1.211  -0.258  -0.684  0.00  0.00           H+0
HETATM   70  H   UNK     0       1.124  -2.137   1.841  0.00  0.00           H+0
HETATM   71  H   UNK     0       3.406  -2.519   1.530  0.00  0.00           H+0
HETATM   72  H   UNK     0       3.098  -0.618  -0.972  0.00  0.00           H+0
HETATM   73  H   UNK     0       4.639  -2.100  -2.076  0.00  0.00           H+0
HETATM   74  H   UNK     0       3.319  -3.015  -1.352  0.00  0.00           H+0
HETATM   75  H   UNK     0       4.449  -3.857   0.403  0.00  0.00           H+0
HETATM   76  H   UNK     0       5.700  -3.983  -0.840  0.00  0.00           H+0
HETATM   77  H   UNK     0       7.146  -2.834   0.450  0.00  0.00           H+0
HETATM   78  H   UNK     0       5.803  -2.482   1.591  0.00  0.00           H+0
HETATM   79  H   UNK     0       6.184  -1.169  -1.146  0.00  0.00           H+0
HETATM   80  H   UNK     0      10.036   0.288   0.533  0.00  0.00           H+0
HETATM   81  H   UNK     0       8.351   1.994   1.381  0.00  0.00           H+0
HETATM   82  H   UNK     0       8.527   2.861  -0.162  0.00  0.00           H+0
HETATM   83  H   UNK     0      10.282   3.945   1.050  0.00  0.00           H+0
HETATM   84  H   UNK     0      10.459   2.491   2.119  0.00  0.00           H+0
HETATM   85  H   UNK     0      12.387   3.076   0.443  0.00  0.00           H+0
HETATM   86  H   UNK     0      11.803   1.324   0.582  0.00  0.00           H+0
HETATM   87  H   UNK     0      10.814   3.350  -1.498  0.00  0.00           H+0
HETATM   88  H   UNK     0      12.100   2.150  -1.759  0.00  0.00           H+0
HETATM   89  H   UNK     0      10.652   0.370  -1.860  0.00  0.00           H+0
HETATM   90  H   UNK     0       9.449   1.655  -2.111  0.00  0.00           H+0
HETATM   91  H   UNK     0       4.757   0.655  -0.131  0.00  0.00           H+0
HETATM   92  H   UNK     0       4.640  -0.277   1.367  0.00  0.00           H+0
HETATM   93  H   UNK     0      -5.032  -1.519   4.319  0.00  0.00           H+0
HETATM   94  H   UNK     0      -1.406  -1.011   3.660  0.00  0.00           H+0
CONECT    1    2   45   46   47                                             
CONECT    2    1    3   48   49                                             
CONECT    3    2    4    9   50                                             
CONECT    4    3    5   51                                                  
CONECT    5    4    6   52                                                  
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9                                                       
CONECT    9    8   10    3   53                                             
CONECT   10    9   11   54                                                  
CONECT   11   10   12   55                                                  
CONECT   12   11   13   14   17                                             
CONECT   13   12   56                                                       
CONECT   14   12   15   57   58                                             
CONECT   15   14   16   59   60                                             
CONECT   16   15   61   62                                                  
CONECT   17   12   18   40   63                                             
CONECT   18   17   19   64   65                                             
CONECT   19   18   20   21   66                                             
CONECT   20   19   67                                                       
CONECT   21   19   22   68                                                  
CONECT   22   21   23   69                                                  
CONECT   23   22   24   70                                                  
CONECT   24   23   25   71                                                  
CONECT   25   24   26   39   72                                             
CONECT   26   25   27   73   74                                             
CONECT   27   26   28   75   76                                             
CONECT   28   27   29   77   78                                             
CONECT   29   28   30   39   79                                             
CONECT   30   29   31                                                       
CONECT   31   30   32   33                                                  
CONECT   32   31                                                            
CONECT   33   31   34   38   80                                             
CONECT   34   33   35   81   82                                             
CONECT   35   34   36   83   84                                             
CONECT   36   35   37   85   86                                             
CONECT   37   36   38   87   88                                             
CONECT   38   37   33   89   90                                             
CONECT   39   29   25   91   92                                             
CONECT   40   17   41                                                       
CONECT   41   40   42   43   44                                             
CONECT   42   41                                                            
CONECT   43   41   93                                                       
CONECT   44   41   94                                                       
CONECT   45    1                                                            
CONECT   46    1                                                            
CONECT   47    1                                                            
CONECT   48    2                                                            
CONECT   49    2                                                            
CONECT   50    3                                                            
CONECT   51    4                                                            
CONECT   52    5                                                            
CONECT   53    9                                                            
CONECT   54   10                                                            
CONECT   55   11                                                            
CONECT   56   13                                                            
CONECT   57   14                                                            
CONECT   58   14                                                            
CONECT   59   15                                                            
CONECT   60   15                                                            
CONECT   61   16                                                            
CONECT   62   16                                                            
CONECT   63   17                                                            
CONECT   64   18                                                            
CONECT   65   18                                                            
CONECT   66   19                                                            
CONECT   67   20                                                            
CONECT   68   21                                                            
CONECT   69   22                                                            
CONECT   70   23                                                            
CONECT   71   24                                                            
CONECT   72   25                                                            
CONECT   73   26                                                            
CONECT   74   26                                                            
CONECT   75   27                                                            
CONECT   76   27                                                            
CONECT   77   28                                                            
CONECT   78   28                                                            
CONECT   79   29                                                            
CONECT   80   33                                                            
CONECT   81   34                                                            
CONECT   82   34                                                            
CONECT   83   35                                                            
CONECT   84   35                                                            
CONECT   85   36                                                            
CONECT   86   36                                                            
CONECT   87   37                                                            
CONECT   88   37                                                            
CONECT   89   38                                                            
CONECT   90   38                                                            
CONECT   91   39                                                            
CONECT   92   39                                                            
CONECT   93   43                                                            
CONECT   94   44                                                            
MASTER        0    0    0    0    0    0    0    0   94    0  192    0
END

RDKit          3D

94 96  0  0  0  0  0  0  0  0999 V2000
  -10.6274    2.7166   -0.0691 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5526    1.8059    0.4275 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4617    1.7150   -0.5915 C   0  0  1  0  0  0  0  0  0  0  0  0
   -7.8924    3.0464   -0.8338 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8252    3.5449   -0.2347 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1463    2.7136    0.7513 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1277    3.1076    1.3669 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7115    1.4517    0.9588 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3491    0.7719   -0.1362 C   0  0  2  0  0  0  0  0  0  0  0  0
   -6.4323    0.5757   -1.2832 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3849   -0.2136   -1.3011 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9414   -1.0369   -0.1896 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.7913   -0.9792    0.8916 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8245   -2.5091   -0.5552 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1651   -2.9988   -0.9925 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1808   -2.8795    0.0174 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5903   -0.5192    0.3171 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.6437   -0.2688   -0.7869 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.6354   -1.6439    1.0024 C   0  0  0  0  0  0  0  0  0  0  0  0
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    3.6992   -1.2330   -0.2854 C   0  0  2  0  0  0  0  0  0  0  0  0
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   10.3162    2.8298    1.0739 C   0  0  0  0  0  0  0  0  0  0  0  0
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  1  2  1  0
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 39 92  1  0
 43 93  1  0
 44 94  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
{[3-(2-aminoethyl)-10-[3-(cyclohexanecarbonyloxy)cyclohexyl]-1-(3-ethyl-6-oxo-3,6-dihydro-2H-pyran-2-yl)-3,6-dihydroxydeca-1,7,9-trien-4-yl]oxy}phosphonate	Generator

Chemical Formula

C₃₂H₅₀NO₁₀P

Average Mass

639.7230 Da

Monoisotopic Mass

639.31723 Da

IUPAC Name

{[(1Z,3S,4S,6S,7E,9Z)-3-(2-aminoethyl)-10-[(1R,3S)-3-(cyclohexanecarbonyloxy)cyclohexyl]-1-[(2R,3S)-3-ethyl-6-oxo-3,6-dihydro-2H-pyran-2-yl]-3,6-dihydroxydeca-1,7,9-trien-4-yl]oxy}phosphonic acid

Traditional Name

[(1Z,3S,4S,6S,7E,9Z)-3-(2-aminoethyl)-10-[(1R,3S)-3-(cyclohexanecarbonyloxy)cyclohexyl]-1-[(2R,3S)-3-ethyl-6-oxo-2,3-dihydropyran-2-yl]-3,6-dihydroxydeca-1,7,9-trien-4-yl]oxyphosphonic acid

CAS Registry Number

Not Available

SMILES

CCC1C=CC(=O)OC1C=CC(O)(CCN)C(CC(O)C=CC=CC1CCCC(C1)OC(=O)C1CCCCC1)OP(O)(O)=O

InChI Identifier

InChI=1S/C32H50NO10P/c1-2-24-15-16-30(35)42-28(24)17-18-32(37,19-20-33)29(43-44(38,39)40)22-26(34)13-7-6-9-23-10-8-14-27(21-23)41-31(36)25-11-4-3-5-12-25/h6-7,9,13,15-18,23-29,34,37H,2-5,8,10-12,14,19-22,33H2,1H3,(H2,38,39,40)

InChI Key

VPPYLHODJVARBC-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Streptomyces	NPAtlas	18277002
Streptomyces nigrescens SC-273	Bacteria	KNApSAcK

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.06	ALOGPS
logP	2.86	ChemAxon
logS	-5.2	ALOGPS
pKa (Strongest Acidic)	1.52	ChemAxon
pKa (Strongest Basic)	9.81	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	185.84 Å²	ChemAxon
Rotatable Bond Count	16	ChemAxon
Refractivity	169.72 m³·mol⁻¹	ChemAxon
Polarizability	69.33 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

NPAtlas ID

NPA015788

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

164137

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Mizuhara N, Usuki Y, Ogita M, Fujita K, Kuroda M, Doe M, Iio H, Tanaka T: Identification of phoslactomycin E as a metabolite inducing hyphal morphological abnormalities in Aspergillus fumigatus IFO 5840. J Antibiot (Tokyo). 2007 Dec;60(12):762-5. doi: 10.1038/ja.2007.101. [PubMed:18277002 ]

Showing NP-Card for Phoslactomycin E (NP0007575)

MOL for NP0007575 (Phoslactomycin E)

3D MOL for NP0007575 (Phoslactomycin E)

3D SDF for NP0007575 (Phoslactomycin E)

3D-SDF for NP0007575 (Phoslactomycin E)

PDB for NP0007575 (Phoslactomycin E)

3D PDB for NP0007575 (Phoslactomycin E)

SMILES for NP0007575 (Phoslactomycin E)

INCHI for NP0007575 (Phoslactomycin E)

Structure for NP0007575 (Phoslactomycin E)

3D Structure for NP0007575 (Phoslactomycin E)