NP-MRD: Showing NP-Card for Gallicynoic acid F (NP0007539)

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Record Information

Version

1.0

Created at

2020-12-09 04:23:39 UTC

Updated at

2021-07-15 16:57:51 UTC

NP-MRD ID

NP0007539

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Gallicynoic acid F

Provided By

NPAtlas

Description

Gallicynoic Acid F is also known as gallicynoate F. Gallicynoic acid F is found in Coriolopsis gallica. It was first documented in 2008 (PMID: 18247526). Based on a literature review a significant number of articles have been published on Gallicynoic Acid F (PMID: 34403725) (PMID: 34402282) (PMID: 34402243) (PMID: 34399547) (PMID: 34399448) (PMID: 34396757).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242118413D          

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M  END

     RDKit          3D

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M  END


  Mrv1652306242118413D          

 56 55  0  0  0  0            999 V2000
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   -0.8091   -1.4086   -0.7673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4545   -1.6334   -2.1069 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4968    1.5479   -0.6873 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4116    0.7465    1.1001 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1117    2.1809   -2.0965 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5675   -0.1293   -3.6035 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9694    0.9837   -3.0720 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9934    1.1453   -1.3130 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2850   -1.5113   -2.6962 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4871   -1.2115   -0.9621 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5423   -0.6225   -3.1414 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4661   -2.1322   -2.0889 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7976   -0.6846   -0.1094 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9291    0.7959   -1.2252 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8766   -0.2022   -2.3215 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6991   -1.6334   -1.2207 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4149    0.1189   -0.4263 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1097    1.3363   -0.4114 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8776    0.0935    1.3630 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1213   -1.2084    1.3244 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3546    0.6359    4.0320 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  5  7  1  0  0  0  0
  7  8  3  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 22 24  1  0  0  0  0
  1 25  1  0  0  0  0
  1 26  1  0  0  0  0
  1 27  1  0  0  0  0
  2 28  1  0  0  0  0
  2 29  1  0  0  0  0
  3 30  1  0  0  0  0
  3 31  1  0  0  0  0
  4 32  1  0  0  0  0
  4 33  1  0  0  0  0
  5 34  1  1  0  0  0
  6 35  1  0  0  0  0
  9 36  1  1  0  0  0
 10 37  1  0  0  0  0
 11 38  1  1  0  0  0
 12 39  1  0  0  0  0
 13 40  1  1  0  0  0
 14 41  1  0  0  0  0
 15 42  1  0  0  0  0
 15 43  1  0  0  0  0
 16 44  1  0  0  0  0
 16 45  1  0  0  0  0
 17 46  1  0  0  0  0
 17 47  1  0  0  0  0
 18 48  1  0  0  0  0
 18 49  1  0  0  0  0
 19 50  1  0  0  0  0
 19 51  1  0  0  0  0
 20 52  1  0  0  0  0
 20 53  1  0  0  0  0
 21 54  1  0  0  0  0
 21 55  1  0  0  0  0
 24 56  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0007539

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC(=O)C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[C@@]([H])(O[H])[C@]([H])(O[H])[C@]([H])(O[H])C#C[C@]([H])(O[H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C18H32O6/c1-2-3-9-14(19)12-13-16(21)18(24)15(20)10-7-5-4-6-8-11-17(22)23/h14-16,18-21,24H,2-11H2,1H3,(H,22,23)/t14-,15-,16-,18+/m1/s1

> <INCHI_KEY>
DTCUTCQYZMBUDK-UHFFFAOYSA-N

> <FORMULA>
C18H32O6

> <MOLECULAR_WEIGHT>
344.448

> <EXACT_MASS>
344.21988875

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
56

> <JCHEM_AVERAGE_POLARIZABILITY>
38.8916478899764

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(9R,10S,11R,14R)-9,10,11,14-tetrahydroxyoctadec-12-ynoic acid

> <ALOGPS_LOGP>
1.48

> <JCHEM_LOGP>
2.1189974243333336

> <ALOGPS_LOGS>
-3.66

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
12.314997351641406

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.6153253424934615

> <JCHEM_PKA_STRONGEST_BASIC>
-3.1950979204898804

> <JCHEM_POLAR_SURFACE_AREA>
118.22000000000001

> <JCHEM_REFRACTIVITY>
91.40099999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
15

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
7.54e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(9R,10S,11R,14R)-9,10,11,14-tetrahydroxyoctadec-12-ynoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 56 55  0  0  0  0  0  0  0  0999 V2000
   -6.2170    1.3952    0.9211 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0106    0.1529    0.9791 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2603   -1.1087    0.9998 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3516   -1.4075    2.1114 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1668   -0.5514    2.3581 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4961   -1.0925    3.4940 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2150   -0.5684    1.2259 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4446   -0.5620    0.3009 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4778   -0.5385   -0.8277 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.2639   -0.6651   -1.9720 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6868    0.7264   -0.8210 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1243    0.9207    0.2775 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0522    1.0224   -2.0997 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7094    0.7752   -3.2345 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4687    0.6001   -2.1593 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7825   -0.8343   -1.9908 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2720   -1.0467   -2.1414 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0528   -0.2819   -1.1194 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5420   -0.5595   -1.3173 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3081    0.2293   -0.2958 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9329   -0.1517    1.1074 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7742    0.6889    2.0395 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6054    1.5240    1.6001 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5852    0.4948    3.3881 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2200    1.2747    0.4659 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8196    2.1265    0.2811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1249    1.9231    1.8967 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7150    0.1352    0.1034 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6722    0.1979    1.8906 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7125   -1.2079    0.0045 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0236   -1.9523    0.9630 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0501   -2.5131    2.1256 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9763   -1.3382    3.0693 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4617    0.4807    2.5513 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7207   -0.5039    4.2547 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8091   -1.4086   -0.7673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4545   -1.6334   -2.1069 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4968    1.5479   -0.6873 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4116    0.7465    1.1001 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1117    2.1809   -2.0965 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5675   -0.1293   -3.6035 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9694    0.9837   -3.0720 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9934    1.1453   -1.3130 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2850   -1.5113   -2.6962 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4871   -1.2115   -0.9621 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5423   -0.6225   -3.1414 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4661   -2.1322   -2.0889 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7976   -0.6846   -0.1094 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9291    0.7959   -1.2252 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8766   -0.2022   -2.3215 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6991   -1.6334   -1.2207 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4149    0.1189   -0.4263 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1097    1.3363   -0.4114 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8776    0.0935    1.3630 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1213   -1.2084    1.3244 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3546    0.6359    4.0320 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  5  7  1  0
  7  8  3  0
  8  9  1  0
  9 10  1  0
  9 11  1  0
 11 12  1  0
 11 13  1  0
 13 14  1  0
 13 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  2  0
 22 24  1  0
  1 25  1  0
  1 26  1  0
  1 27  1  0
  2 28  1  0
  2 29  1  0
  3 30  1  0
  3 31  1  0
  4 32  1  0
  4 33  1  0
  5 34  1  1
  6 35  1  0
  9 36  1  1
 10 37  1  0
 11 38  1  1
 12 39  1  0
 13 40  1  1
 14 41  1  0
 15 42  1  0
 15 43  1  0
 16 44  1  0
 16 45  1  0
 17 46  1  0
 17 47  1  0
 18 48  1  0
 18 49  1  0
 19 50  1  0
 19 51  1  0
 20 52  1  0
 20 53  1  0
 21 54  1  0
 21 55  1  0
 24 56  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0      -6.217   1.395   0.921  0.00  0.00           C+0
HETATM    2  C   UNK     0      -7.011   0.153   0.979  0.00  0.00           C+0
HETATM    3  C   UNK     0      -6.260  -1.109   1.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -5.352  -1.408   2.111  0.00  0.00           C+0
HETATM    5  C   UNK     0      -4.167  -0.551   2.358  0.00  0.00           C+0
HETATM    6  O   UNK     0      -3.496  -1.093   3.494  0.00  0.00           O+0
HETATM    7  C   UNK     0      -3.215  -0.568   1.226  0.00  0.00           C+0
HETATM    8  C   UNK     0      -2.445  -0.562   0.301  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.478  -0.539  -0.828  0.00  0.00           C+0
HETATM   10  O   UNK     0      -2.264  -0.665  -1.972  0.00  0.00           O+0
HETATM   11  C   UNK     0      -0.687   0.726  -0.821  0.00  0.00           C+0
HETATM   12  O   UNK     0       0.124   0.921   0.278  0.00  0.00           O+0
HETATM   13  C   UNK     0       0.052   1.022  -2.100  0.00  0.00           C+0
HETATM   14  O   UNK     0      -0.709   0.775  -3.235  0.00  0.00           O+0
HETATM   15  C   UNK     0       1.469   0.600  -2.159  0.00  0.00           C+0
HETATM   16  C   UNK     0       1.783  -0.834  -1.991  0.00  0.00           C+0
HETATM   17  C   UNK     0       3.272  -1.047  -2.141  0.00  0.00           C+0
HETATM   18  C   UNK     0       4.053  -0.282  -1.119  0.00  0.00           C+0
HETATM   19  C   UNK     0       5.542  -0.560  -1.317  0.00  0.00           C+0
HETATM   20  C   UNK     0       6.308   0.229  -0.296  0.00  0.00           C+0
HETATM   21  C   UNK     0       5.933  -0.152   1.107  0.00  0.00           C+0
HETATM   22  C   UNK     0       6.774   0.689   2.039  0.00  0.00           C+0
HETATM   23  O   UNK     0       7.605   1.524   1.600  0.00  0.00           O+0
HETATM   24  O   UNK     0       6.585   0.495   3.388  0.00  0.00           O+0
HETATM   25  H   UNK     0      -5.220   1.275   0.466  0.00  0.00           H+0
HETATM   26  H   UNK     0      -6.820   2.127   0.281  0.00  0.00           H+0
HETATM   27  H   UNK     0      -6.125   1.923   1.897  0.00  0.00           H+0
HETATM   28  H   UNK     0      -7.715   0.135   0.103  0.00  0.00           H+0
HETATM   29  H   UNK     0      -7.672   0.198   1.891  0.00  0.00           H+0
HETATM   30  H   UNK     0      -5.713  -1.208   0.005  0.00  0.00           H+0
HETATM   31  H   UNK     0      -7.024  -1.952   0.963  0.00  0.00           H+0
HETATM   32  H   UNK     0      -5.050  -2.513   2.126  0.00  0.00           H+0
HETATM   33  H   UNK     0      -5.976  -1.338   3.069  0.00  0.00           H+0
HETATM   34  H   UNK     0      -4.462   0.481   2.551  0.00  0.00           H+0
HETATM   35  H   UNK     0      -3.721  -0.504   4.255  0.00  0.00           H+0
HETATM   36  H   UNK     0      -0.809  -1.409  -0.767  0.00  0.00           H+0
HETATM   37  H   UNK     0      -2.454  -1.633  -2.107  0.00  0.00           H+0
HETATM   38  H   UNK     0      -1.497   1.548  -0.687  0.00  0.00           H+0
HETATM   39  H   UNK     0      -0.412   0.747   1.100  0.00  0.00           H+0
HETATM   40  H   UNK     0       0.112   2.181  -2.096  0.00  0.00           H+0
HETATM   41  H   UNK     0      -0.568  -0.129  -3.603  0.00  0.00           H+0
HETATM   42  H   UNK     0       1.969   0.984  -3.072  0.00  0.00           H+0
HETATM   43  H   UNK     0       1.993   1.145  -1.313  0.00  0.00           H+0
HETATM   44  H   UNK     0       1.285  -1.511  -2.696  0.00  0.00           H+0
HETATM   45  H   UNK     0       1.487  -1.212  -0.962  0.00  0.00           H+0
HETATM   46  H   UNK     0       3.542  -0.623  -3.141  0.00  0.00           H+0
HETATM   47  H   UNK     0       3.466  -2.132  -2.089  0.00  0.00           H+0
HETATM   48  H   UNK     0       3.798  -0.685  -0.109  0.00  0.00           H+0
HETATM   49  H   UNK     0       3.929   0.796  -1.225  0.00  0.00           H+0
HETATM   50  H   UNK     0       5.877  -0.202  -2.321  0.00  0.00           H+0
HETATM   51  H   UNK     0       5.699  -1.633  -1.221  0.00  0.00           H+0
HETATM   52  H   UNK     0       7.415   0.119  -0.426  0.00  0.00           H+0
HETATM   53  H   UNK     0       6.110   1.336  -0.411  0.00  0.00           H+0
HETATM   54  H   UNK     0       4.878   0.094   1.363  0.00  0.00           H+0
HETATM   55  H   UNK     0       6.121  -1.208   1.324  0.00  0.00           H+0
HETATM   56  H   UNK     0       7.355   0.636   4.032  0.00  0.00           H+0
CONECT    1    2   25   26   27                                             
CONECT    2    1    3   28   29                                             
CONECT    3    2    4   30   31                                             
CONECT    4    3    5   32   33                                             
CONECT    5    4    6    7   34                                             
CONECT    6    5   35                                                       
CONECT    7    5    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   11   36                                             
CONECT   10    9   37                                                       
CONECT   11    9   12   13   38                                             
CONECT   12   11   39                                                       
CONECT   13   11   14   15   40                                             
CONECT   14   13   41                                                       
CONECT   15   13   16   42   43                                             
CONECT   16   15   17   44   45                                             
CONECT   17   16   18   46   47                                             
CONECT   18   17   19   48   49                                             
CONECT   19   18   20   50   51                                             
CONECT   20   19   21   52   53                                             
CONECT   21   20   22   54   55                                             
CONECT   22   21   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   56                                                       
CONECT   25    1                                                            
CONECT   26    1                                                            
CONECT   27    1                                                            
CONECT   28    2                                                            
CONECT   29    2                                                            
CONECT   30    3                                                            
CONECT   31    3                                                            
CONECT   32    4                                                            
CONECT   33    4                                                            
CONECT   34    5                                                            
CONECT   35    6                                                            
CONECT   36    9                                                            
CONECT   37   10                                                            
CONECT   38   11                                                            
CONECT   39   12                                                            
CONECT   40   13                                                            
CONECT   41   14                                                            
CONECT   42   15                                                            
CONECT   43   15                                                            
CONECT   44   16                                                            
CONECT   45   16                                                            
CONECT   46   17                                                            
CONECT   47   17                                                            
CONECT   48   18                                                            
CONECT   49   18                                                            
CONECT   50   19                                                            
CONECT   51   19                                                            
CONECT   52   20                                                            
CONECT   53   20                                                            
CONECT   54   21                                                            
CONECT   55   21                                                            
CONECT   56   24                                                            
MASTER        0    0    0    0    0    0    0    0   56    0  110    0
END

RDKit          3D

56 55  0  0  0  0  0  0  0  0999 V2000
   -6.2170    1.3952    0.9211 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0106    0.1529    0.9791 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2603   -1.1087    0.9998 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3516   -1.4075    2.1114 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1668   -0.5514    2.3581 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4961   -1.0925    3.4940 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2150   -0.5684    1.2259 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4446   -0.5620    0.3009 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4778   -0.5385   -0.8277 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.2639   -0.6651   -1.9720 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6868    0.7264   -0.8210 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1243    0.9207    0.2775 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0522    1.0224   -2.0997 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7094    0.7752   -3.2345 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4687    0.6001   -2.1593 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7825   -0.8343   -1.9908 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2720   -1.0467   -2.1414 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0528   -0.2819   -1.1194 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5420   -0.5595   -1.3173 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3081    0.2293   -0.2958 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9329   -0.1517    1.1074 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7742    0.6889    2.0395 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6054    1.5240    1.6001 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5852    0.4948    3.3881 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2200    1.2747    0.4659 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8196    2.1265    0.2811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1249    1.9231    1.8967 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7150    0.1352    0.1034 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6722    0.1979    1.8906 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7125   -1.2079    0.0045 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0236   -1.9523    0.9630 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0501   -2.5131    2.1256 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9763   -1.3382    3.0693 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4617    0.4807    2.5513 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7207   -0.5039    4.2547 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8091   -1.4086   -0.7673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4545   -1.6334   -2.1069 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4968    1.5479   -0.6873 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4116    0.7465    1.1001 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1117    2.1809   -2.0965 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5675   -0.1293   -3.6035 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9694    0.9837   -3.0720 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9934    1.1453   -1.3130 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2850   -1.5113   -2.6962 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4871   -1.2115   -0.9621 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5423   -0.6225   -3.1414 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4661   -2.1322   -2.0889 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7976   -0.6846   -0.1094 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9291    0.7959   -1.2252 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8766   -0.2022   -2.3215 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6991   -1.6334   -1.2207 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4149    0.1189   -0.4263 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1097    1.3363   -0.4114 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8776    0.0935    1.3630 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1213   -1.2084    1.3244 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3546    0.6359    4.0320 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  5  7  1  0
  7  8  3  0
  8  9  1  0
  9 10  1  0
  9 11  1  0
 11 12  1  0
 11 13  1  0
 13 14  1  0
 13 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  2  0
 22 24  1  0
  1 25  1  0
  1 26  1  0
  1 27  1  0
  2 28  1  0
  2 29  1  0
  3 30  1  0
  3 31  1  0
  4 32  1  0
  4 33  1  0
  5 34  1  1
  6 35  1  0
  9 36  1  1
 10 37  1  0
 11 38  1  1
 12 39  1  0
 13 40  1  1
 14 41  1  0
 15 42  1  0
 15 43  1  0
 16 44  1  0
 16 45  1  0
 17 46  1  0
 17 47  1  0
 18 48  1  0
 18 49  1  0
 19 50  1  0
 19 51  1  0
 20 52  1  0
 20 53  1  0
 21 54  1  0
 21 55  1  0
 24 56  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
Gallicynoate F	Generator
9,10,11,14-Tetrahydroxyoctadec-12-ynoate	Generator

Chemical Formula

C₁₈H₃₂O₆

Average Mass

344.4480 Da

Monoisotopic Mass

344.21989 Da

IUPAC Name

(9R,10S,11R,14R)-9,10,11,14-tetrahydroxyoctadec-12-ynoic acid

Traditional Name

(9R,10S,11R,14R)-9,10,11,14-tetrahydroxyoctadec-12-ynoic acid

CAS Registry Number

Not Available

SMILES

CCCCC(O)C#CC(O)C(O)C(O)CCCCCCCC(O)=O

InChI Identifier

InChI=1S/C18H32O6/c1-2-3-9-14(19)12-13-16(21)18(24)15(20)10-7-5-4-6-8-11-17(22)23/h14-16,18-21,24H,2-11H2,1H3,(H,22,23)

InChI Key

DTCUTCQYZMBUDK-UHFFFAOYSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 150 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 250 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 175 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 225 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, Methanol-d4, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Coriolopsis gallica	NPAtlas	18247526

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.48	ALOGPS
logP	2.12	ChemAxon
logS	-3.7	ALOGPS
pKa (Strongest Acidic)	4.62	ChemAxon
pKa (Strongest Basic)	-3.2	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	118.22 Å²	ChemAxon
Rotatable Bond Count	15	ChemAxon
Refractivity	91.4 m³·mol⁻¹	ChemAxon
Polarizability	38.89 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA002071

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00039250

Chemspider ID

78444621

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

24800195

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Zhou ZY, Wang F, Tang JG, Fang LZ, Dong ZJ, Liu JK: Gallicynoic acids A-I, acetylenic acids from the basidiomycete Coriolopsis gallica. J Nat Prod. 2008 Feb;71(2):223-6. doi: 10.1021/np070638p. Epub 2008 Feb 2. [PubMed:18247526 ]
Lee D, Kim JY, Qi Y, Park S, Lee HL, Yamabe N, Kim H, Jang DS, Kang KS: Phytochemicals from the Flowers of Prunus persica (L.) Batsch: Anti-adipogenic Effect of Mandelamide on 3T3-L1 preadipocytes. Bioorg Med Chem Lett. 2021 Aug 14:128326. doi: 10.1016/j.bmcl.2021.128326. [PubMed:34403725 ]
Wu MT, Liu SY, Huang DL, He LN, Guo M, Ni L, Zou SQ: [Chemical constituents from the leaves of Cinnamomum camphora var. linaloolifera and their anti-inflammatory activities]. Zhongguo Zhong Yao Za Zhi. 2021 Jul;46(14):3592-3598. doi: 10.19540/j.cnki.cjcmm.20210318.602. [PubMed:34402282 ]
Moon JY, Min JH, Kim YK, Cha D, Hwang JA, Ko SE, Choi SY, Yun EJ, Kim SW, Won HJ: Prognosis after Curative Resection of Single Hepatocellular Carcinoma with A Focus on LI-RADS Targetoid Appearance on Preoperative Gadoxetic Acid-Enhanced MRI. Korean J Radiol. 2021 Jul 26. pii: 22.e98. doi: 10.3348/kjr.2020.1428. [PubMed:34402243 ]
Ishii AK, Toto Pacioles C, Were L: Color and structural modifications of alkaline extracted sunflower protein concentrates and isolates using L-cysteine and glutathione. Food Res Int. 2021 Sep;147:110574. doi: 10.1016/j.foodres.2021.110574. Epub 2021 Jul 1. [PubMed:34399547 ]
Woern C, Marangoni AG, Weiss J, Barbut S: Effects of partially replacing animal fat by ethylcellulose based organogels in ground cooked salami. Food Res Int. 2021 Sep;147:110431. doi: 10.1016/j.foodres.2021.110431. Epub 2021 May 19. [PubMed:34399448 ]
Cai YS, Li Y, Chen ZC, Yu SS: [Erythrina alkaloids from stems of Erythrina corallodendron]. Zhongguo Zhong Yao Za Zhi. 2021 Jul;46(13):3368-3376. doi: 10.19540/j.cnki.cjcmm.20210331.201. [PubMed:34396757 ]
Kasem NG, Al-Ashmawy M, Elsherbini M, Abdelkhalek A: Antimicrobial resistance and molecular genotyping of Escherichia coli and Staphylococcus aureus isolated from some Egyptian cheeses. J Adv Vet Anim Res. 2021 Jun 19;8(2):246-255. doi: 10.5455/javar.2021.h509. eCollection 2021 Jun. [PubMed:34395595 ]
Havsed K, Stensson M, Jansson H, Carda-Dieguez M, Pedersen A, Neilands J, Svensater G, Mira A: Bacterial Composition and Metabolomics of Dental Plaque From Adolescents. Front Cell Infect Microbiol. 2021 Jul 30;11:716493. doi: 10.3389/fcimb.2021.716493. eCollection 2021. [PubMed:34395316 ]

Showing NP-Card for Gallicynoic acid F (NP0007539)

MOL for NP0007539 (Gallicynoic acid F)

3D MOL for NP0007539 (Gallicynoic acid F)

3D SDF for NP0007539 (Gallicynoic acid F)

3D-SDF for NP0007539 (Gallicynoic acid F)

PDB for NP0007539 (Gallicynoic acid F)

3D PDB for NP0007539 (Gallicynoic acid F)

SMILES for NP0007539 (Gallicynoic acid F)

INCHI for NP0007539 (Gallicynoic acid F)

Structure for NP0007539 (Gallicynoic acid F)

3D Structure for NP0007539 (Gallicynoic acid F)