NP-MRD: Showing NP-Card for Ambiguine J isonitrile (NP0006920)

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Record Information

Version

2.0

Created at

2020-12-09 03:50:15 UTC

Updated at

2021-07-15 16:56:10 UTC

NP-MRD ID

NP0006920

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Ambiguine J isonitrile

Provided By

NPAtlas

Description

Ambiguine J isonitrile is found in Fischerella sp. Ambiguine J isonitrile was first documented in 2007 (PMID: 17315959). Based on a literature review very few articles have been published on ambiguine J isonitrile.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242118363D          

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M  CHG  2   1  -1   2   1
M  END

     RDKit          3D

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M  CHG  2   1  -1   2   1
M  END


  Mrv1652306242118363D          

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    2.5414    0.4887   -0.2057 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0108    1.4589    0.8983 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.4919    3.2102    0.0635 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.6877   -3.0117   -1.8851 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5460   -4.0196   -1.0178 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4120    0.1177    1.9734 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3304    0.2886    2.1529 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2611   -1.4194   -1.4740 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9733   -2.7669    0.5492 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2866   -2.4635   -1.1668 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0552   -0.9072    1.2739 H   0  0  0  0  0  0  0  0  0  0  0  0
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    3.1580    2.4779    0.5398 H   0  0  0  0  0  0  0  0  0  0  0  0
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    5.3538    0.9725   -2.1297 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1824    0.3368   -0.4177 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.5269   -2.9169    1.9650 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  3  0  0  0  0
  3  2  1  6  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
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  7  8  1  1  0  0  0
  7  9  1  0  0  0  0
  7 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  1  0  0  0
 18 20  1  0  0  0  0
 20 21  1  1  0  0  0
 20 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  1  6  0  0  0
 27 28  2  3  0  0  0
 22 29  1  0  0  0  0
 29 30  1  6  0  0  0
 29 31  1  0  0  0  0
 20  3  1  0  0  0  0
 25  3  1  0  0  0  0
  6  4  1  0  0  0  0
 18 10  1  0  0  0  0
 17 12  1  0  0  0  0
 29 16  1  0  0  0  0
  4 32  1  6  0  0  0
  6 33  1  6  0  0  0
  8 34  1  0  0  0  0
  8 35  1  0  0  0  0
  8 36  1  0  0  0  0
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  9 38  1  0  0  0  0
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 26 51  1  0  0  0  0
 26 52  1  0  0  0  0
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 28 55  1  0  0  0  0
 30 56  1  0  0  0  0
 30 57  1  0  0  0  0
 30 58  1  0  0  0  0
 31 59  1  0  0  0  0
 31 60  1  0  0  0  0
 31 61  1  0  0  0  0
M  CHG  2   1  -1   2   1
M  END
> <DATABASE_ID>
NP0006920

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@]12C3=NC4=C([H])C([H])=C([H])C(=C14)C(C([H])([H])[H])(C([H])([H])[H])[C@]1([H])C([H])([H])C([H])([H])[C@](C([H])=C([H])[H])(C([H])([H])[H])[C@]([N+]#[C-])([C@]4([H])O[C@]4([H])C3(C([H])([H])[H])C([H])([H])[H])[C@@]21O[H]

> <INCHI_IDENTIFIER>
InChI=1S/C26H30N2O3/c1-8-23(6)13-12-16-21(2,3)14-10-9-11-15-17(14)24(29)20(28-15)22(4,5)18-19(31-18)25(23,27-7)26(16,24)30/h8-11,16,18-19,29-30H,1,12-13H2,2-6H3/t16-,18-,19+,23+,24-,25+,26-/m0/s1

> <INCHI_KEY>
GTBYKMVNBWUXSM-XIFLMVLWSA-N

> <FORMULA>
C26H30N2O3

> <MOLECULAR_WEIGHT>
418.537

> <EXACT_MASS>
418.225642834

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
61

> <JCHEM_AVERAGE_POLARIZABILITY>
45.61621795657468

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,4S,5S,6S,8R,18S,19R)-4-ethenyl-5-isocyano-4,9,9,20,20-pentamethyl-7-oxa-11-azahexacyclo[14.3.1.0^{5,19}.0^{6,8}.0^{10,18}.0^{12,17}]icosa-10,12,14,16-tetraene-18,19-diol

> <ALOGPS_LOGP>
4.34

> <JCHEM_LOGP>
2.3109985031240545

> <ALOGPS_LOGS>
-4.71

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA>
12.547861960144335

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.195072470531683

> <JCHEM_PKA_STRONGEST_BASIC>
4.355599406450523

> <JCHEM_POLAR_SURFACE_AREA>
69.71000000000001

> <JCHEM_REFRACTIVITY>
127.8835

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
9.20e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,4S,5S,6S,8R,18S,19R)-4-ethenyl-5-isocyano-4,9,9,20,20-pentamethyl-7-oxa-11-azahexacyclo[14.3.1.0^{5,19}.0^{6,8}.0^{10,18}.0^{12,17}]icosa-10,12,14,16-tetraene-18,19-diol

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

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    1.8845   -1.9592   -0.2392 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.2611   -1.4194   -1.4740 H   0  0  0  0  0  0  0  0  0  0  0  0
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    2.2866   -2.4635   -1.1668 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0552   -0.9072    1.2739 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8530   -1.1895   -0.2587 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4452    1.3566    1.8255 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1580    2.4779    0.5398 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0591    1.1097    1.1753 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9514    1.2545   -2.3014 H   0  0  0  0  0  0  0  0  0  0  0  0
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  6  7  1  0
  7  8  1  1
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  7 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  1  1
 18 20  1  0
 20 21  1  1
 20 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
 25 27  1  6
 27 28  2  3
 22 29  1  0
 29 30  1  6
 29 31  1  0
 20  3  1  0
 25  3  1  0
  6  4  1  0
 18 10  1  0
 17 12  1  0
 29 16  1  0
  4 32  1  6
  6 33  1  6
  8 34  1  0
  8 35  1  0
  8 36  1  0
  9 37  1  0
  9 38  1  0
  9 39  1  0
 13 40  1  0
 14 41  1  0
 15 42  1  0
 19 43  1  0
 21 44  1  0
 22 45  1  6
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 24 48  1  0
 24 49  1  0
 26 50  1  0
 26 51  1  0
 26 52  1  0
 27 53  1  0
 28 54  1  0
 28 55  1  0
 30 56  1  0
 30 57  1  0
 30 58  1  0
 31 59  1  0
 31 60  1  0
 31 61  1  0
M  CHG  2   1  -1   2   1
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0       0.843   0.311  -3.068  0.00  0.00           C-1
HETATM    2  N   UNK     0       0.950   0.539  -1.919  0.00  0.00           N+1
HETATM    3  C   UNK     0       1.067   0.844  -0.514  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.950   2.295  -0.279  0.00  0.00           C+0
HETATM    5  O   UNK     0       0.892   2.837   0.984  0.00  0.00           O+0
HETATM    6  C   UNK     0      -0.111   3.103  -0.076  0.00  0.00           C+0
HETATM    7  C   UNK     0      -1.452   2.797   0.444  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.436   2.958   1.948  0.00  0.00           C+0
HETATM    9  C   UNK     0      -2.524   3.757  -0.038  0.00  0.00           C+0
HETATM   10  C   UNK     0      -1.841   1.383   0.122  0.00  0.00           C+0
HETATM   11  N   UNK     0      -2.973   1.174  -0.436  0.00  0.00           N+0
HETATM   12  C   UNK     0      -3.167  -0.208  -0.685  0.00  0.00           C+0
HETATM   13  C   UNK     0      -4.129  -1.014  -1.285  0.00  0.00           C+0
HETATM   14  C   UNK     0      -3.942  -2.384  -1.421  0.00  0.00           C+0
HETATM   15  C   UNK     0      -2.753  -2.968  -0.943  0.00  0.00           C+0
HETATM   16  C   UNK     0      -1.812  -2.182  -0.357  0.00  0.00           C+0
HETATM   17  C   UNK     0      -2.057  -0.841  -0.248  0.00  0.00           C+0
HETATM   18  C   UNK     0      -1.193   0.122   0.434  0.00  0.00           C+0
HETATM   19  O   UNK     0      -1.496  -0.191   1.839  0.00  0.00           O+0
HETATM   20  C   UNK     0       0.216  -0.120   0.198  0.00  0.00           C+0
HETATM   21  O   UNK     0       0.828  -0.249   1.496  0.00  0.00           O+0
HETATM   22  C   UNK     0       0.488  -1.519  -0.384  0.00  0.00           C+0
HETATM   23  C   UNK     0       1.885  -1.959  -0.239  0.00  0.00           C+0
HETATM   24  C   UNK     0       2.837  -0.894   0.156  0.00  0.00           C+0
HETATM   25  C   UNK     0       2.541   0.489  -0.206  0.00  0.00           C+0
HETATM   26  C   UNK     0       3.011   1.459   0.898  0.00  0.00           C+0
HETATM   27  C   UNK     0       3.364   0.871  -1.400  0.00  0.00           C+0
HETATM   28  C   UNK     0       4.675   0.716  -1.297  0.00  0.00           C+0
HETATM   29  C   UNK     0      -0.456  -2.585   0.113  0.00  0.00           C+0
HETATM   30  C   UNK     0      -0.110  -3.825  -0.732  0.00  0.00           C+0
HETATM   31  C   UNK     0      -0.482  -2.897   1.532  0.00  0.00           C+0
HETATM   32  H   UNK     0       1.814   2.826  -0.864  0.00  0.00           H+0
HETATM   33  H   UNK     0      -0.062   4.207  -0.385  0.00  0.00           H+0
HETATM   34  H   UNK     0      -1.535   4.049   2.219  0.00  0.00           H+0
HETATM   35  H   UNK     0      -2.381   2.496   2.326  0.00  0.00           H+0
HETATM   36  H   UNK     0      -0.543   2.508   2.419  0.00  0.00           H+0
HETATM   37  H   UNK     0      -2.410   4.029  -1.091  0.00  0.00           H+0
HETATM   38  H   UNK     0      -2.550   4.686   0.550  0.00  0.00           H+0
HETATM   39  H   UNK     0      -3.492   3.210   0.064  0.00  0.00           H+0
HETATM   40  H   UNK     0      -5.035  -0.526  -1.644  0.00  0.00           H+0
HETATM   41  H   UNK     0      -4.688  -3.012  -1.885  0.00  0.00           H+0
HETATM   42  H   UNK     0      -2.546  -4.020  -1.018  0.00  0.00           H+0
HETATM   43  H   UNK     0      -2.412   0.118   1.973  0.00  0.00           H+0
HETATM   44  H   UNK     0       0.330   0.289   2.153  0.00  0.00           H+0
HETATM   45  H   UNK     0       0.261  -1.419  -1.474  0.00  0.00           H+0
HETATM   46  H   UNK     0       1.973  -2.767   0.549  0.00  0.00           H+0
HETATM   47  H   UNK     0       2.287  -2.463  -1.167  0.00  0.00           H+0
HETATM   48  H   UNK     0       3.055  -0.907   1.274  0.00  0.00           H+0
HETATM   49  H   UNK     0       3.853  -1.190  -0.259  0.00  0.00           H+0
HETATM   50  H   UNK     0       2.445   1.357   1.825  0.00  0.00           H+0
HETATM   51  H   UNK     0       3.158   2.478   0.540  0.00  0.00           H+0
HETATM   52  H   UNK     0       4.059   1.110   1.175  0.00  0.00           H+0
HETATM   53  H   UNK     0       2.951   1.254  -2.301  0.00  0.00           H+0
HETATM   54  H   UNK     0       5.354   0.973  -2.130  0.00  0.00           H+0
HETATM   55  H   UNK     0       5.182   0.337  -0.418  0.00  0.00           H+0
HETATM   56  H   UNK     0       0.970  -3.962  -0.749  0.00  0.00           H+0
HETATM   57  H   UNK     0      -0.420  -3.543  -1.780  0.00  0.00           H+0
HETATM   58  H   UNK     0      -0.691  -4.701  -0.399  0.00  0.00           H+0
HETATM   59  H   UNK     0       0.146  -2.341   2.226  0.00  0.00           H+0
HETATM   60  H   UNK     0      -0.158  -3.978   1.667  0.00  0.00           H+0
HETATM   61  H   UNK     0      -1.527  -2.917   1.965  0.00  0.00           H+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   20   25                                             
CONECT    4    3    5    6   32                                             
CONECT    5    4    6                                                       
CONECT    6    5    7    4   33                                             
CONECT    7    6    8    9   10                                             
CONECT    8    7   34   35   36                                             
CONECT    9    7   37   38   39                                             
CONECT   10    7   11   18                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13   17                                                  
CONECT   13   12   14   40                                                  
CONECT   14   13   15   41                                                  
CONECT   15   14   16   42                                                  
CONECT   16   15   17   29                                                  
CONECT   17   16   18   12                                                  
CONECT   18   17   19   20   10                                             
CONECT   19   18   43                                                       
CONECT   20   18   21   22    3                                             
CONECT   21   20   44                                                       
CONECT   22   20   23   29   45                                             
CONECT   23   22   24   46   47                                             
CONECT   24   23   25   48   49                                             
CONECT   25   24   26   27    3                                             
CONECT   26   25   50   51   52                                             
CONECT   27   25   28   53                                                  
CONECT   28   27   54   55                                                  
CONECT   29   22   30   31   16                                             
CONECT   30   29   56   57   58                                             
CONECT   31   29   59   60   61                                             
CONECT   32    4                                                            
CONECT   33    6                                                            
CONECT   34    8                                                            
CONECT   35    8                                                            
CONECT   36    8                                                            
CONECT   37    9                                                            
CONECT   38    9                                                            
CONECT   39    9                                                            
CONECT   40   13                                                            
CONECT   41   14                                                            
CONECT   42   15                                                            
CONECT   43   19                                                            
CONECT   44   21                                                            
CONECT   45   22                                                            
CONECT   46   23                                                            
CONECT   47   23                                                            
CONECT   48   24                                                            
CONECT   49   24                                                            
CONECT   50   26                                                            
CONECT   51   26                                                            
CONECT   52   26                                                            
CONECT   53   27                                                            
CONECT   54   28                                                            
CONECT   55   28                                                            
CONECT   56   30                                                            
CONECT   57   30                                                            
CONECT   58   30                                                            
CONECT   59   31                                                            
CONECT   60   31                                                            
CONECT   61   31                                                            
MASTER        0    0    0    0    0    0    0    0   61    0  132    0
END

RDKit          3D

61 66  0  0  0  0  0  0  0  0999 V2000
    0.8425    0.3114   -3.0683 C   0  0  0  0  0  3  0  0  0  0  0  0
    0.9499    0.5390   -1.9193 N   0  0  0  0  0  4  0  0  0  0  0  0
    1.0667    0.8438   -0.5142 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.9495    2.2954   -0.2790 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8922    2.8369    0.9842 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1108    3.1029   -0.0761 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4517    2.7973    0.4441 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.4359    2.9583    1.9484 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5244    3.7573   -0.0376 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8415    1.3826    0.1221 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9733    1.1739   -0.4357 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1672   -0.2081   -0.6854 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1294   -1.0138   -1.2854 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9418   -2.3835   -1.4209 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7526   -2.9682   -0.9427 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8123   -2.1820   -0.3568 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0566   -0.8409   -0.2479 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1932    0.1220    0.4341 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4962   -0.1906    1.8388 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2162   -0.1203    0.1979 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8277   -0.2490    1.4963 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4883   -1.5193   -0.3842 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8845   -1.9592   -0.2392 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8366   -0.8938    0.1564 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5414    0.4887   -0.2057 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0108    1.4589    0.8983 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3639    0.8709   -1.3996 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6748    0.7156   -1.2973 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4564   -2.5848    0.1126 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1104   -3.8245   -0.7324 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4817   -2.8971    1.5318 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8139    2.8262   -0.8644 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0623    4.2067   -0.3846 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5345    4.0488    2.2194 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3809    2.4958    2.3260 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5430    2.5078    2.4193 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4105    4.0295   -1.0914 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5501    4.6859    0.5504 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4919    3.2102    0.0635 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0345   -0.5255   -1.6439 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6877   -3.0117   -1.8851 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5460   -4.0196   -1.0178 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4120    0.1177    1.9734 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3304    0.2886    2.1529 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2611   -1.4194   -1.4740 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9733   -2.7669    0.5492 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2866   -2.4635   -1.1668 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0552   -0.9072    1.2739 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8530   -1.1895   -0.2587 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4452    1.3566    1.8255 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1580    2.4779    0.5398 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0591    1.1097    1.1753 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9514    1.2545   -2.3014 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3538    0.9725   -2.1297 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1824    0.3368   -0.4177 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9702   -3.9619   -0.7494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4201   -3.5430   -1.7803 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6910   -4.7013   -0.3988 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1458   -2.3410    2.2264 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1577   -3.9781    1.6669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5269   -2.9169    1.9650 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  3  0
  3  2  1  6
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  1
  7  9  1  0
  7 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  1  1
 18 20  1  0
 20 21  1  1
 20 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
 25 27  1  6
 27 28  2  3
 22 29  1  0
 29 30  1  6
 29 31  1  0
 20  3  1  0
 25  3  1  0
  6  4  1  0
 18 10  1  0
 17 12  1  0
 29 16  1  0
  4 32  1  6
  6 33  1  6
  8 34  1  0
  8 35  1  0
  8 36  1  0
  9 37  1  0
  9 38  1  0
  9 39  1  0
 13 40  1  0
 14 41  1  0
 15 42  1  0
 19 43  1  0
 21 44  1  0
 22 45  1  6
 23 46  1  0
 23 47  1  0
 24 48  1  0
 24 49  1  0
 26 50  1  0
 26 51  1  0
 26 52  1  0
 27 53  1  0
 28 54  1  0
 28 55  1  0
 30 56  1  0
 30 57  1  0
 30 58  1  0
 31 59  1  0
 31 60  1  0
 31 61  1  0
M  CHG  2   1  -1   2   1
M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₂₆H₃₀N₂O₃

Average Mass

418.5370 Da

Monoisotopic Mass

418.22564 Da

IUPAC Name

(1S,4S,5S,6S,8R,18S,19R)-4-ethenyl-5-isocyano-4,9,9,20,20-pentamethyl-7-oxa-11-azahexacyclo[14.3.1.0^{5,19}.0^{6,8}.0^{10,18}.0^{12,17}]icosa-10,12,14,16-tetraene-18,19-diol

Traditional Name

(1S,4S,5S,6S,8R,18S,19R)-4-ethenyl-5-isocyano-4,9,9,20,20-pentamethyl-7-oxa-11-azahexacyclo[14.3.1.0^{5,19}.0^{6,8}.0^{10,18}.0^{12,17}]icosa-10,12,14,16-tetraene-18,19-diol

CAS Registry Number

Not Available

SMILES

CC1(C)[C@@H]2CC[C@@](C)(C=C)[C@]3([N+]#[C-])[C@@H]4O[C@@H]4C(C)(C)C4=NC5=CC=CC1=C5[C@@]4(O)[C@@]23O

InChI Identifier

InChI=1S/C26H30N2O3/c1-8-23(6)13-12-16-21(2,3)14-10-9-11-15-17(14)24(29)20(28-15)22(4,5)18-19(31-18)25(23,27-7)26(16,24)30/h8-11,16,18-19,29-30H,1,12-13H2,2-6H3/t16-,18-,19+,23+,24-,25+,26-/m0/s1

InChI Key

GTBYKMVNBWUXSM-XIFLMVLWSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Fischerella sp.	NPAtlas	17315959

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.34	ALOGPS
logP	2.31	ChemAxon
logS	-4.7	ALOGPS
pKa (Strongest Acidic)	11.2	ChemAxon
pKa (Strongest Basic)	4.36	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	69.71 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	127.88 m³·mol⁻¹	ChemAxon
Polarizability	45.62 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA002392

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00038434

Chemspider ID

78436517

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139583760

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Raveh A, Carmeli S: Antimicrobial ambiguines from the cyanobacterium Fischerella sp. collected in Israel. J Nat Prod. 2007 Feb;70(2):196-201. doi: 10.1021/np060495r. [PubMed:17315959 ]

Showing NP-Card for Ambiguine J isonitrile (NP0006920)

MOL for NP0006920 (Ambiguine J isonitrile)

3D MOL for NP0006920 (Ambiguine J isonitrile)

3D SDF for NP0006920 (Ambiguine J isonitrile)

3D-SDF for NP0006920 (Ambiguine J isonitrile)

PDB for NP0006920 (Ambiguine J isonitrile)

3D PDB for NP0006920 (Ambiguine J isonitrile)

SMILES for NP0006920 (Ambiguine J isonitrile)

INCHI for NP0006920 (Ambiguine J isonitrile)

Structure for NP0006920 (Ambiguine J isonitrile)

3D Structure for NP0006920 (Ambiguine J isonitrile)