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Record Information
Version2.0
Created at2020-12-09 03:47:23 UTC
Updated at2021-07-15 16:56:02 UTC
NP-MRD IDNP0006875
Secondary Accession NumbersNone
Natural Product Identification
Common NamePaecilodepsipeptide C
Provided ByNPAtlasNPAtlas Logo
Description(2R)-2-[(2-{[(2S)-2-{[(2S)-1,2-dihydroxy-3-phenylpropylidene]amino}-1-hydroxypropylidene]amino}-1-hydroxyethylidene)amino]-3-(4-hydroxyphenyl)-N-[(1R)-1-{[(2R)-1-methoxy-3-{4-[(3-methylbut-2-en-1-yl)oxy]phenyl}-1-oxopropan-2-yl]-C-hydroxycarbonimidoyl}ethyl]propanimidic acid belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds. Paecilodepsipeptide C is found in Paecilomyces. Based on a literature review very few articles have been published on (2R)-2-[(2-{[(2S)-2-{[(2S)-1,2-dihydroxy-3-phenylpropylidene]amino}-1-hydroxypropylidene]amino}-1-hydroxyethylidene)amino]-3-(4-hydroxyphenyl)-N-[(1R)-1-{[(2R)-1-methoxy-3-{4-[(3-methylbut-2-en-1-yl)oxy]phenyl}-1-oxopropan-2-yl]-C-hydroxycarbonimidoyl}ethyl]propanimidic acid.
Structure
Thumb
Synonyms
ValueSource
(2R)-2-[(2-{[(2S)-2-{[(2S)-1,2-dihydroxy-3-phenylpropylidene]amino}-1-hydroxypropylidene]amino}-1-hydroxyethylidene)amino]-3-(4-hydroxyphenyl)-N-[(1R)-1-{[(2R)-1-methoxy-3-{4-[(3-methylbut-2-en-1-yl)oxy]phenyl}-1-oxopropan-2-yl]-C-hydroxycarbonimidoyl}ethyl]propanimidateGenerator
Chemical FormulaC41H51N5O10
Average Mass773.8840 Da
Monoisotopic Mass773.36359 Da
IUPAC Namemethyl (2R)-2-[(2R)-2-[(2R)-2-{2-[(2S)-2-[(2S)-2-hydroxy-3-phenylpropanamido]propanamido]acetamido}-3-(4-hydroxyphenyl)propanamido]propanamido]-3-{4-[(3-methylbut-2-en-1-yl)oxy]phenyl}propanoate
Traditional Namemethyl (2R)-2-[(2R)-2-[(2R)-2-{2-[(2S)-2-[(2S)-2-hydroxy-3-phenylpropanamido]propanamido]acetamido}-3-(4-hydroxyphenyl)propanamido]propanamido]-3-{4-[(3-methylbut-2-en-1-yl)oxy]phenyl}propanoate
CAS Registry NumberNot Available
SMILES
COC(=O)[C@@H](CC1=CC=C(OCC=C(C)C)C=C1)NC(=O)[C@@H](C)NC(=O)[C@@H](CC1=CC=C(O)C=C1)NC(=O)CNC(=O)[C@H](C)NC(=O)[C@@H](O)CC1=CC=CC=C1
InChI Identifier
InChI=1S/C41H51N5O10/c1-25(2)19-20-56-32-17-13-30(14-18-32)22-34(41(54)55-5)46-38(51)27(4)43-39(52)33(21-29-11-15-31(47)16-12-29)45-36(49)24-42-37(50)26(3)44-40(53)35(48)23-28-9-7-6-8-10-28/h6-19,26-27,33-35,47-48H,20-24H2,1-5H3,(H,42,50)(H,43,52)(H,44,53)(H,45,49)(H,46,51)/t26-,27+,33+,34+,35-/m0/s1
InChI KeyBRNVVRZOPMOJBI-ZIOXGVOXSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
PaecilomycesNPAtlas
Species Where Detected
Species NameSourceReference
Paecilomyces cinnamoneus BCC9616KNApSAcK Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentOligopeptides
Alternative Parents
Substituents
  • Alpha-oligopeptide
  • Tyrosine or derivatives
  • Phenylalanine or derivatives
  • N-acyl-alpha amino acid or derivatives
  • Alpha-amino acid ester
  • Alpha-amino acid amide
  • Alanine or derivatives
  • Amphetamine or derivatives
  • N-substituted-alpha-amino acid
  • Alpha-amino acid or derivatives
  • Phenoxy compound
  • Phenol ether
  • Alkyl aryl ether
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Fatty acid ester
  • Benzenoid
  • Fatty amide
  • Fatty acyl
  • Monocyclic benzene moiety
  • Methyl ester
  • Secondary carboxylic acid amide
  • Carboxamide group
  • Secondary alcohol
  • Carboxylic acid ester
  • Ether
  • Monocarboxylic acid or derivatives
  • Alcohol
  • Carbonyl group
  • Organonitrogen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organic oxygen compound
  • Organic nitrogen compound
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.05ALOGPS
logP2.29ChemAxon
logS-5.6ALOGPS
pKa (Strongest Acidic)9.5ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count9ChemAxon
Hydrogen Donor Count7ChemAxon
Polar Surface Area221.49 ŲChemAxon
Rotatable Bond Count21ChemAxon
Refractivity207.02 m³·mol⁻¹ChemAxon
Polarizability82.85 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA014186
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID17344045
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound16216415
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References