NP-MRD: Showing NP-Card for Ophiobolin I (NP0006272)

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Record Information

Version

2.0

Created at

2020-12-09 03:18:32 UTC

Updated at

2021-07-15 16:54:19 UTC

NP-MRD ID

NP0006272

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Ophiobolin I

Provided By

NPAtlas

Description

Ophiobolin I is found in Drechslera gigantea and Drechslera sp.. Ophiobolin I was first documented in 1987 (PMID: 16593832). Based on a literature review a small amount of articles have been published on Ophiobolin I (PMID: 16962149) (PMID: 33074690) (PMID: 32547498).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242118263D          

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M  END


  Mrv1652306242118263D          

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   -2.4944    1.3502    0.9241 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.6391    1.1894   -0.8674 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4186    3.4940    2.5855 H   0  0  0  0  0  0  0  0  0  0  0  0
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    4.2261   -0.2493    0.4623 H   0  0  0  0  0  0  0  0  0  0  0  0
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    2.0519   -1.0601    0.9217 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7476   -2.3150   -1.7998 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9655   -3.1108   -0.3354 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6305   -2.5264   -0.2844 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4915    0.2674   -2.8160 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8658   -0.8469   -2.8973 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3780   -2.7032   -2.0885 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6737   -1.6780   -3.0795 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6411   -3.5053   -0.6602 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8792   -2.8162    0.3987 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0994   -2.6371    0.7825 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6150   -2.0386   -1.8236 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -5.7585   -3.0561   -0.3661 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2687   -3.3651    0.5431 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1993   -3.1804   -1.2332 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4533   -0.6452   -0.0895 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9928    1.2081   -1.1660 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4676    2.9337    2.3602 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1068    2.1787    2.0260 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9783    3.2796   -0.2312 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0571    1.7148    2.2427 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4711   -0.8714    1.7208 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7398    0.3934    1.4892 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6619    0.6745   -0.8533 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  2  4  2  3  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  1  0  0  0
 12 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 16 18  2  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 22 25  2  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
  9 28  1  6  0  0  0
 28  5  1  0  0  0  0
 27  9  1  0  0  0  0
 27 12  1  0  0  0  0
 21 15  1  0  0  0  0
  1 29  1  0  0  0  0
  1 30  1  0  0  0  0
  1 31  1  0  0  0  0
  3 32  1  0  0  0  0
  3 33  1  0  0  0  0
  3 34  1  0  0  0  0
  4 35  1  0  0  0  0
  5 36  1  6  0  0  0
  6 37  1  0  0  0  0
  6 38  1  0  0  0  0
  7 39  1  1  0  0  0
  8 40  1  0  0  0  0
  8 41  1  0  0  0  0
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 14 50  1  0  0  0  0
 14 51  1  0  0  0  0
 15 52  1  1  0  0  0
 17 53  1  0  0  0  0
 17 54  1  0  0  0  0
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 25 61  1  0  0  0  0
 26 62  1  0  0  0  0
 26 63  1  0  0  0  0
 27 64  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0006272

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC([H])([H])C1=C([H])/C([H])([H])[C@@]2([H])[C@]3(O[C@@]([H])(C([H])=C(C([H])([H])[H])C([H])([H])[H])C([H])([H])[C@]3([H])C([H])([H])[H])C([H])([H])C([H])([H])[C@]2(C([H])([H])[H])C([H])([H])[C@]2([H])C(=C([H])C(=O)[C@@]\12[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C25H36O3/c1-15(2)10-19-12-17(4)25(28-19)9-8-24(5)13-20-16(3)11-21(27)23(20)18(14-26)6-7-22(24)25/h6,10-11,17,19-20,22-23,26H,7-9,12-14H2,1-5H3/b18-6-/t17-,19-,20+,22+,23-,24+,25-/m0/s1

> <INCHI_KEY>
PWHAYWTWJLFKJT-MUKMEUIDSA-N

> <FORMULA>
C25H36O3

> <MOLECULAR_WEIGHT>
384.56

> <EXACT_MASS>
384.266445019

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
64

> <JCHEM_AVERAGE_POLARIZABILITY>
45.449238740753465

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1'S,2S,3S,3'R,5R,7'R,9'E,11'R)-10'-(hydroxymethyl)-3,3',14'-trimethyl-5-(2-methylprop-1-en-1-yl)spiro[oxolane-2,6'-tricyclo[9.3.0.0^{3,7}]tetradecane]-9',13'-dien-12'-one

> <ALOGPS_LOGP>
4.39

> <JCHEM_LOGP>
4.334874899333332

> <ALOGPS_LOGS>
-4.57

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
16.09656561480332

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.695139205181398

> <JCHEM_PKA_STRONGEST_BASIC>
-2.7385457065545804

> <JCHEM_POLAR_SURFACE_AREA>
46.53

> <JCHEM_REFRACTIVITY>
115.32529999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.04e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1'S,2S,3S,3'R,5R,7'R,9'E,11'R)-10'-(hydroxymethyl)-3,3',14'-trimethyl-5-(2-methylprop-1-en-1-yl)spiro[oxolane-2,6'-tricyclo[9.3.0.0^{3,7}]tetradecane]-9',13'-dien-12'-one

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 64 67  0  0  0  0  0  0  0  0999 V2000
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    2.0519   -1.0601    0.9217 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7476   -2.3150   -1.7998 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9655   -3.1108   -0.3354 H   0  0  0  0  0  0  0  0  0  0  0  0
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  1  2  1  0
  2  3  1  0
  2  4  2  3
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  1
 12 14  1  0
 14 15  1  0
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 16 17  1  0
 16 18  2  0
 18 19  1  0
 19 20  2  0
 19 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  0
 22 25  2  0
 25 26  1  0
 26 27  1  0
  9 28  1  6
 28  5  1  0
 27  9  1  0
 27 12  1  0
 21 15  1  0
  1 29  1  0
  1 30  1  0
  1 31  1  0
  3 32  1  0
  3 33  1  0
  3 34  1  0
  4 35  1  0
  5 36  1  6
  6 37  1  0
  6 38  1  0
  7 39  1  1
  8 40  1  0
  8 41  1  0
  8 42  1  0
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 13 47  1  0
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 17 53  1  0
 17 54  1  0
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 21 57  1  6
 23 58  1  0
 23 59  1  0
 24 60  1  0
 25 61  1  0
 26 62  1  0
 26 63  1  0
 27 64  1  6
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0       4.486   2.904   2.581  0.00  0.00           C+0
HETATM    2  C   UNK     0       4.350   2.204   1.273  0.00  0.00           C+0
HETATM    3  C   UNK     0       5.606   1.832   0.576  0.00  0.00           C+0
HETATM    4  C   UNK     0       3.151   1.959   0.817  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.948   1.256  -0.496  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.517  -0.112  -0.367  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.257  -0.938  -0.158  0.00  0.00           C+0
HETATM    8  C   UNK     0       2.598  -2.302  -0.698  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.261  -0.165  -0.895  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.990  -0.613  -2.314  0.00  0.00           C+0
HETATM   11  C   UNK     0      -0.038  -1.682  -2.191  0.00  0.00           C+0
HETATM   12  C   UNK     0      -0.811  -1.414  -0.902  0.00  0.00           C+0
HETATM   13  C   UNK     0      -0.869  -2.604  -0.016  0.00  0.00           C+0
HETATM   14  C   UNK     0      -2.252  -1.110  -1.338  0.00  0.00           C+0
HETATM   15  C   UNK     0      -3.111  -0.718  -0.186  0.00  0.00           C+0
HETATM   16  C   UNK     0      -4.459  -1.339  -0.200  0.00  0.00           C+0
HETATM   17  C   UNK     0      -4.690  -2.797  -0.311  0.00  0.00           C+0
HETATM   18  C   UNK     0      -5.378  -0.406  -0.100  0.00  0.00           C+0
HETATM   19  C   UNK     0      -4.767   0.911  -0.011  0.00  0.00           C+0
HETATM   20  O   UNK     0      -5.425   1.953   0.179  0.00  0.00           O+0
HETATM   21  C   UNK     0      -3.322   0.792  -0.178  0.00  0.00           C+0
HETATM   22  C   UNK     0      -2.494   1.350   0.924  0.00  0.00           C+0
HETATM   23  C   UNK     0      -3.160   2.495   1.594  0.00  0.00           C+0
HETATM   24  O   UNK     0      -3.383   3.494   0.636  0.00  0.00           O+0
HETATM   25  C   UNK     0      -1.282   1.049   1.436  0.00  0.00           C+0
HETATM   26  C   UNK     0      -0.260   0.027   1.111  0.00  0.00           C+0
HETATM   27  C   UNK     0      -0.150  -0.207  -0.353  0.00  0.00           C+0
HETATM   28  O   UNK     0       1.639   1.189  -0.867  0.00  0.00           O+0
HETATM   29  H   UNK     0       5.419   3.494   2.586  0.00  0.00           H+0
HETATM   30  H   UNK     0       4.564   2.136   3.386  0.00  0.00           H+0
HETATM   31  H   UNK     0       3.625   3.587   2.749  0.00  0.00           H+0
HETATM   32  H   UNK     0       6.165   1.026   1.074  0.00  0.00           H+0
HETATM   33  H   UNK     0       5.394   1.610  -0.506  0.00  0.00           H+0
HETATM   34  H   UNK     0       6.320   2.706   0.534  0.00  0.00           H+0
HETATM   35  H   UNK     0       2.257   2.246   1.353  0.00  0.00           H+0
HETATM   36  H   UNK     0       3.495   1.823  -1.306  0.00  0.00           H+0
HETATM   37  H   UNK     0       4.226  -0.249   0.462  0.00  0.00           H+0
HETATM   38  H   UNK     0       3.968  -0.399  -1.347  0.00  0.00           H+0
HETATM   39  H   UNK     0       2.052  -1.060   0.922  0.00  0.00           H+0
HETATM   40  H   UNK     0       2.748  -2.315  -1.800  0.00  0.00           H+0
HETATM   41  H   UNK     0       1.966  -3.111  -0.335  0.00  0.00           H+0
HETATM   42  H   UNK     0       3.631  -2.526  -0.284  0.00  0.00           H+0
HETATM   43  H   UNK     0       0.492   0.267  -2.816  0.00  0.00           H+0
HETATM   44  H   UNK     0       1.866  -0.847  -2.897  0.00  0.00           H+0
HETATM   45  H   UNK     0       0.378  -2.703  -2.088  0.00  0.00           H+0
HETATM   46  H   UNK     0      -0.674  -1.678  -3.079  0.00  0.00           H+0
HETATM   47  H   UNK     0      -0.641  -3.505  -0.660  0.00  0.00           H+0
HETATM   48  H   UNK     0      -1.879  -2.816   0.399  0.00  0.00           H+0
HETATM   49  H   UNK     0      -0.099  -2.637   0.783  0.00  0.00           H+0
HETATM   50  H   UNK     0      -2.615  -2.039  -1.824  0.00  0.00           H+0
HETATM   51  H   UNK     0      -2.248  -0.296  -2.095  0.00  0.00           H+0
HETATM   52  H   UNK     0      -2.681  -0.986   0.801  0.00  0.00           H+0
HETATM   53  H   UNK     0      -5.758  -3.056  -0.366  0.00  0.00           H+0
HETATM   54  H   UNK     0      -4.269  -3.365   0.543  0.00  0.00           H+0
HETATM   55  H   UNK     0      -4.199  -3.180  -1.233  0.00  0.00           H+0
HETATM   56  H   UNK     0      -6.453  -0.645  -0.090  0.00  0.00           H+0
HETATM   57  H   UNK     0      -2.993   1.208  -1.166  0.00  0.00           H+0
HETATM   58  H   UNK     0      -2.468   2.934   2.360  0.00  0.00           H+0
HETATM   59  H   UNK     0      -4.107   2.179   2.026  0.00  0.00           H+0
HETATM   60  H   UNK     0      -2.978   3.280  -0.231  0.00  0.00           H+0
HETATM   61  H   UNK     0      -1.057   1.715   2.243  0.00  0.00           H+0
HETATM   62  H   UNK     0      -0.471  -0.871   1.721  0.00  0.00           H+0
HETATM   63  H   UNK     0       0.740   0.393   1.489  0.00  0.00           H+0
HETATM   64  H   UNK     0      -0.662   0.675  -0.853  0.00  0.00           H+0
CONECT    1    2   29   30   31                                             
CONECT    2    1    3    4                                                  
CONECT    3    2   32   33   34                                             
CONECT    4    2    5   35                                                  
CONECT    5    4    6   28   36                                             
CONECT    6    5    7   37   38                                             
CONECT    7    6    8    9   39                                             
CONECT    8    7   40   41   42                                             
CONECT    9    7   10   28   27                                             
CONECT   10    9   11   43   44                                             
CONECT   11   10   12   45   46                                             
CONECT   12   11   13   14   27                                             
CONECT   13   12   47   48   49                                             
CONECT   14   12   15   50   51                                             
CONECT   15   14   16   21   52                                             
CONECT   16   15   17   18                                                  
CONECT   17   16   53   54   55                                             
CONECT   18   16   19   56                                                  
CONECT   19   18   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   22   15   57                                             
CONECT   22   21   23   25                                                  
CONECT   23   22   24   58   59                                             
CONECT   24   23   60                                                       
CONECT   25   22   26   61                                                  
CONECT   26   25   27   62   63                                             
CONECT   27   26    9   12   64                                             
CONECT   28    9    5                                                       
CONECT   29    1                                                            
CONECT   30    1                                                            
CONECT   31    1                                                            
CONECT   32    3                                                            
CONECT   33    3                                                            
CONECT   34    3                                                            
CONECT   35    4                                                            
CONECT   36    5                                                            
CONECT   37    6                                                            
CONECT   38    6                                                            
CONECT   39    7                                                            
CONECT   40    8                                                            
CONECT   41    8                                                            
CONECT   42    8                                                            
CONECT   43   10                                                            
CONECT   44   10                                                            
CONECT   45   11                                                            
CONECT   46   11                                                            
CONECT   47   13                                                            
CONECT   48   13                                                            
CONECT   49   13                                                            
CONECT   50   14                                                            
CONECT   51   14                                                            
CONECT   52   15                                                            
CONECT   53   17                                                            
CONECT   54   17                                                            
CONECT   55   17                                                            
CONECT   56   18                                                            
CONECT   57   21                                                            
CONECT   58   23                                                            
CONECT   59   23                                                            
CONECT   60   24                                                            
CONECT   61   25                                                            
CONECT   62   26                                                            
CONECT   63   26                                                            
CONECT   64   27                                                            
MASTER        0    0    0    0    0    0    0    0   64    0  134    0
END

RDKit          3D

64 67  0  0  0  0  0  0  0  0999 V2000
    4.4857    2.9044    2.5806 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3497    2.2040    1.2728 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6058    1.8316    0.5761 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1513    1.9593    0.8169 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9477    1.2561   -0.4960 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5165   -0.1116   -0.3673 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2575   -0.9375   -0.1582 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5984   -2.3017   -0.6975 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2613   -0.1645   -0.8946 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.9896   -0.6134   -2.3139 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0379   -1.6819   -2.1909 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8110   -1.4140   -0.9022 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.8690   -2.6036   -0.0158 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2525   -1.1104   -1.3379 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1115   -0.7179   -0.1857 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.4588   -1.3392   -0.1996 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6904   -2.7974   -0.3111 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3783   -0.4061   -0.0998 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7670    0.9113   -0.0111 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4254    1.9531    0.1787 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3222    0.7916   -0.1784 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.4944    1.3502    0.9241 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1600    2.4947    1.5943 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3827    3.4941    0.6362 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2824    1.0486    1.4360 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2602    0.0268    1.1115 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1500   -0.2070   -0.3526 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6391    1.1894   -0.8674 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4186    3.4940    2.5855 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5644    2.1358    3.3856 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6254    3.5870    2.7493 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1650    1.0256    1.0739 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3941    1.6102   -0.5056 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3197    2.7058    0.5344 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2569    2.2464    1.3532 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4948    1.8227   -1.3061 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2261   -0.2493    0.4623 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9683   -0.3993   -1.3468 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0519   -1.0601    0.9217 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7476   -2.3150   -1.7998 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9655   -3.1108   -0.3354 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6305   -2.5264   -0.2844 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4915    0.2674   -2.8160 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8658   -0.8469   -2.8973 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3780   -2.7032   -2.0885 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6737   -1.6780   -3.0795 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6411   -3.5053   -0.6602 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8792   -2.8162    0.3987 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0994   -2.6371    0.7825 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6150   -2.0386   -1.8236 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2482   -0.2960   -2.0950 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6812   -0.9861    0.8007 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7585   -3.0561   -0.3661 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2687   -3.3651    0.5431 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1993   -3.1804   -1.2332 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4533   -0.6452   -0.0895 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9928    1.2081   -1.1660 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4676    2.9337    2.3602 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1068    2.1787    2.0260 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9783    3.2796   -0.2312 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0571    1.7148    2.2427 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4711   -0.8714    1.7208 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7398    0.3934    1.4892 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6619    0.6745   -0.8533 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  2  3
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  1
 12 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 16 18  2  0
 18 19  1  0
 19 20  2  0
 19 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  0
 22 25  2  0
 25 26  1  0
 26 27  1  0
  9 28  1  6
 28  5  1  0
 27  9  1  0
 27 12  1  0
 21 15  1  0
  1 29  1  0
  1 30  1  0
  1 31  1  0
  3 32  1  0
  3 33  1  0
  3 34  1  0
  4 35  1  0
  5 36  1  6
  6 37  1  0
  6 38  1  0
  7 39  1  1
  8 40  1  0
  8 41  1  0
  8 42  1  0
 10 43  1  0
 10 44  1  0
 11 45  1  0
 11 46  1  0
 13 47  1  0
 13 48  1  0
 13 49  1  0
 14 50  1  0
 14 51  1  0
 15 52  1  1
 17 53  1  0
 17 54  1  0
 17 55  1  0
 18 56  1  0
 21 57  1  6
 23 58  1  0
 23 59  1  0
 24 60  1  0
 25 61  1  0
 26 62  1  0
 26 63  1  0
 27 64  1  6
M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₂₅H₃₆O₃

Average Mass

384.5600 Da

Monoisotopic Mass

384.26645 Da

IUPAC Name

(1'S,2S,3S,3'R,5R,7'R,9'E,11'R)-10'-(hydroxymethyl)-3,3',14'-trimethyl-5-(2-methylprop-1-en-1-yl)spiro[oxolane-2,6'-tricyclo[9.3.0.0^{3,7}]tetradecane]-9',13'-dien-12'-one

Traditional Name

(1'S,2S,3S,3'R,5R,7'R,9'E,11'R)-10'-(hydroxymethyl)-3,3',14'-trimethyl-5-(2-methylprop-1-en-1-yl)spiro[oxolane-2,6'-tricyclo[9.3.0.0^{3,7}]tetradecane]-9',13'-dien-12'-one

CAS Registry Number

Not Available

SMILES

C[C@H]1C[C@@H](O[C@@]11CC[C@]2(C)C[C@H]3[C@@H](C(=O)C=C3C)\C(CO)=C/C[C@@H]12)C=C(C)C

InChI Identifier

InChI=1S/C25H36O3/c1-15(2)10-19-12-17(4)25(28-19)9-8-24(5)13-20-16(3)11-21(27)23(20)18(14-26)6-7-22(24)25/h6,10-11,17,19-20,22-23,26H,7-9,12-14H2,1-5H3/b18-6-/t17-,19-,20+,22+,23-,24+,25-/m0/s1

InChI Key

PWHAYWTWJLFKJT-MUKMEUIDSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Drechslera gigantea	LOTUS Database	35616633
Drechslera sp.	NPAtlas	16593832

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.39	ALOGPS
logP	4.33	ChemAxon
logS	-4.6	ALOGPS
pKa (Strongest Acidic)	14.7	ChemAxon
pKa (Strongest Basic)	-2.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	46.53 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	115.33 m³·mol⁻¹	ChemAxon
Polarizability	45.45 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA029009

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

24695352

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

14035917

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Sugawara F, Strobel G, Strange RN, Siedow JN, Van Duyne GD, Clardy J: Phytotoxins from the pathogenic fungi Drechslera maydis and Drechslera sorghicola. Proc Natl Acad Sci U S A. 1987 May;84(10):3081-5. doi: 10.1073/pnas.84.10.3081. [PubMed:16593832 ]
Evidente A, Andolfi A, Cimmino A, Vurro M, Fracchiolla M, Charudattan R, Motta A: Ophiobolin E and 8-epi-ophiobolin J produced by Drechslera gigantea, a potential mycoherbicide of weedy grasses. Phytochemistry. 2006 Oct;67(20):2281-7. doi: 10.1016/j.phytochem.2006.07.016. Epub 2006 Sep 7. [PubMed:16962149 ]
Zatout R, Masi M, Sangermano F, Vurro M, Zonno MC, Santoro E, Calabro V, Superchi S, Evidente A: Drophiobiolins A and B, Bioactive Ophiobolan Sestertepenoids Produced by Dreschslera gigantea. J Nat Prod. 2020 Nov 25;83(11):3387-3396. doi: 10.1021/acs.jnatprod.0c00836. Epub 2020 Oct 19. [PubMed:33074690 ]
Shen L, Liu M, He Y, Al Anbari WH, Li H, Lin S, Chai C, Wang J, Hu Z, Zhang Y: Novel Antimicrobial Compounds as Ophiobolin-Type Sesterterpenes and Pimarane-Type Diterpene From Bipolaris Species TJ403-B1. Front Microbiol. 2020 May 29;11:856. doi: 10.3389/fmicb.2020.00856. eCollection 2020. [PubMed:32547498 ]

Showing NP-Card for Ophiobolin I (NP0006272)

MOL for NP0006272 (Ophiobolin I)

3D MOL for NP0006272 (Ophiobolin I)

3D SDF for NP0006272 (Ophiobolin I)

3D-SDF for NP0006272 (Ophiobolin I)

PDB for NP0006272 (Ophiobolin I)

3D PDB for NP0006272 (Ophiobolin I)

SMILES for NP0006272 (Ophiobolin I)

INCHI for NP0006272 (Ophiobolin I)

Structure for NP0006272 (Ophiobolin I)

3D Structure for NP0006272 (Ophiobolin I)