NP-MRD: Showing NP-Card for Cyanosporaside A (NP0006243)

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Record Information

Version

2.0

Created at

2020-12-09 03:16:13 UTC

Updated at

2021-07-15 16:54:14 UTC

NP-MRD ID

NP0006243

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Cyanosporaside A

Provided By

NPAtlas

Description

Cyanosporaside A is found in Salinispora pacifica. Based on a literature review very few articles have been published on 2-[(3S,3aR)-4-chloro-3a-{[(2S,3S,5S,6R)-3,5-dihydroxy-5,6-dimethyl-4-oxooxan-2-yl]oxy}-3-hydroxy-3H,3aH-cyclopenta[a]inden-5-yl]acetonitrile.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242118263D          

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     RDKit          3D

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  Mrv1652306242118263D          

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 12 16  1  0  0  0  0
 16 17  1  0  0  0  0
 16 18  2  0  0  0  0
  7 19  1  0  0  0  0
 19 20  2  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
  4 23  1  0  0  0  0
 23 24  1  0  0  0  0
 23 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  0  0  0  0
 27 29  1  1  0  0  0
 27  2  1  0  0  0  0
 18  6  1  0  0  0  0
 21  6  1  0  0  0  0
 18  9  1  0  0  0  0
  1 30  1  0  0  0  0
  1 31  1  0  0  0  0
  1 32  1  0  0  0  0
  2 33  1  6  0  0  0
  4 34  1  1  0  0  0
  8 35  1  0  0  0  0
 10 36  1  0  0  0  0
 11 37  1  0  0  0  0
 13 38  1  0  0  0  0
 13 39  1  0  0  0  0
 19 40  1  0  0  0  0
 20 41  1  0  0  0  0
 21 42  1  1  0  0  0
 22 43  1  0  0  0  0
 23 44  1  1  0  0  0
 24 45  1  0  0  0  0
 28 46  1  0  0  0  0
 28 47  1  0  0  0  0
 28 48  1  0  0  0  0
 29 49  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0006243

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@@]1([H])C([H])=C([H])C2=C([H])C3=C([H])C([H])=C(C(Cl)=C3[C@@]12O[C@]1([H])O[C@]([H])(C([H])([H])[H])[C@](O[H])(C(=O)[C@@]1([H])O[H])C([H])([H])[H])C([H])([H])C#N

> <INCHI_IDENTIFIER>
InChI=1S/C21H20ClNO6/c1-10-20(2,27)18(26)17(25)19(28-10)29-21-13(5-6-14(21)24)9-12-4-3-11(7-8-23)16(22)15(12)21/h3-6,9-10,14,17,19,24-25,27H,7H2,1-2H3/t10-,14+,17-,19+,20+,21+/m1/s1

> <INCHI_KEY>
FMQYEPDNLFRUQP-LPYYISIISA-N

> <FORMULA>
C21H20ClNO6

> <MOLECULAR_WEIGHT>
417.84

> <EXACT_MASS>
417.0979151

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
49

> <JCHEM_AVERAGE_POLARIZABILITY>
39.687619915456494

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
2-[(3S,3aR)-4-chloro-3a-{[(2S,3S,5S,6R)-3,5-dihydroxy-5,6-dimethyl-4-oxooxan-2-yl]oxy}-3-hydroxy-3H,3aH-cyclopenta[a]inden-5-yl]acetonitrile

> <ALOGPS_LOGP>
1.71

> <JCHEM_LOGP>
1.5523809356666673

> <ALOGPS_LOGS>
-3.54

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.31993743336264

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.348623686445592

> <JCHEM_PKA_STRONGEST_BASIC>
-3.522939633709064

> <JCHEM_POLAR_SURFACE_AREA>
120.01

> <JCHEM_REFRACTIVITY>
105.29129999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.21e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2-[(3S,3aR)-4-chloro-3a-{[(2S,3S,5S,6R)-3,5-dihydroxy-5,6-dimethyl-4-oxooxan-2-yl]oxy}-3-hydroxy-3H-cyclopenta[a]inden-5-yl]acetonitrile

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 49 52  0  0  0  0  0  0  0  0999 V2000
    2.9196   -1.0685   -1.4405 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0344    0.2931   -0.7836 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9059    1.0671   -0.9294 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7948    0.6273   -0.2503 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2232   -0.5081   -0.7716 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1067   -0.3236   -1.2204 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1159    0.7404   -2.2860 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8394    1.7223   -1.8758 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3971    1.4302   -0.5453 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2427    2.1956    0.2750 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6461    1.6720    1.4811 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2272    0.4158    1.8790 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6770   -0.1508    3.2070 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7158   -1.1538    2.9651 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5319   -1.9655    2.7629 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4094   -0.2818    1.0478 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8764   -1.8559    1.5220 Cl  0  0  0  0  0  0  0  0  0  0  0  0
   -1.9451    0.1793   -0.2095 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3103    0.1041   -3.3513 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4530   -1.2127   -3.2675 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3748   -1.4614   -2.1198 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.6482   -1.7280   -2.4620 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0456    0.4013    1.2236 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2689    1.2554    2.0345 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4617    0.7864    1.4975 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8023    1.5736    2.3519 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4809    0.1436    0.6501 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.8706    0.6756    0.8877 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4958   -1.2184    0.9768 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5152   -1.8406   -0.7575 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9456   -1.4234   -1.7152 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3636   -0.9796   -2.3869 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8573    0.8175   -1.3145 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0524    1.4518   -0.2971 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0249    2.6573   -2.4300 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5588    3.1756   -0.0540 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2993    2.2196    2.1549 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0476    0.6420    3.8585 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8006   -0.6912    3.6084 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2808    0.6961   -4.0609 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0076   -1.9699   -3.8872 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9662   -2.3713   -1.6267 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6961   -2.5218   -3.0163 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8594   -0.6460    1.5302 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7524    1.5213    2.8529 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5830   -0.0499    0.4285 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0532    0.6531    1.9780 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0131    1.7045    0.4909 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3383   -1.4922    1.3952 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  6  5  1  1
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  1  0
 14 15  3  0
 12 16  1  0
 16 17  1  0
 16 18  2  0
  7 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  1  0
  4 23  1  0
 23 24  1  0
 23 25  1  0
 25 26  2  0
 25 27  1  0
 27 28  1  0
 27 29  1  1
 27  2  1  0
 18  6  1  0
 21  6  1  0
 18  9  1  0
  1 30  1  0
  1 31  1  0
  1 32  1  0
  2 33  1  6
  4 34  1  1
  8 35  1  0
 10 36  1  0
 11 37  1  0
 13 38  1  0
 13 39  1  0
 19 40  1  0
 20 41  1  0
 21 42  1  1
 22 43  1  0
 23 44  1  1
 24 45  1  0
 28 46  1  0
 28 47  1  0
 28 48  1  0
 29 49  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0       2.920  -1.069  -1.440  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.034   0.293  -0.784  0.00  0.00           C+0
HETATM    3  O   UNK     0       1.906   1.067  -0.929  0.00  0.00           O+0
HETATM    4  C   UNK     0       0.795   0.627  -0.250  0.00  0.00           C+0
HETATM    5  O   UNK     0       0.223  -0.508  -0.772  0.00  0.00           O+0
HETATM    6  C   UNK     0      -1.107  -0.324  -1.220  0.00  0.00           C+0
HETATM    7  C   UNK     0      -1.116   0.740  -2.286  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.839   1.722  -1.876  0.00  0.00           C+0
HETATM    9  C   UNK     0      -2.397   1.430  -0.545  0.00  0.00           C+0
HETATM   10  C   UNK     0      -3.243   2.196   0.275  0.00  0.00           C+0
HETATM   11  C   UNK     0      -3.646   1.672   1.481  0.00  0.00           C+0
HETATM   12  C   UNK     0      -3.227   0.416   1.879  0.00  0.00           C+0
HETATM   13  C   UNK     0      -3.677  -0.151   3.207  0.00  0.00           C+0
HETATM   14  C   UNK     0      -4.716  -1.154   2.965  0.00  0.00           C+0
HETATM   15  N   UNK     0      -5.532  -1.966   2.763  0.00  0.00           N+0
HETATM   16  C   UNK     0      -2.409  -0.282   1.048  0.00  0.00           C+0
HETATM   17 Cl   UNK     0      -1.876  -1.856   1.522  0.00  0.00          Cl+0
HETATM   18  C   UNK     0      -1.945   0.179  -0.210  0.00  0.00           C+0
HETATM   19  C   UNK     0      -0.310   0.104  -3.351  0.00  0.00           C+0
HETATM   20  C   UNK     0      -0.453  -1.213  -3.268  0.00  0.00           C+0
HETATM   21  C   UNK     0      -1.375  -1.461  -2.120  0.00  0.00           C+0
HETATM   22  O   UNK     0      -2.648  -1.728  -2.462  0.00  0.00           O+0
HETATM   23  C   UNK     0       1.046   0.401   1.224  0.00  0.00           C+0
HETATM   24  O   UNK     0       0.269   1.255   2.034  0.00  0.00           O+0
HETATM   25  C   UNK     0       2.462   0.786   1.498  0.00  0.00           C+0
HETATM   26  O   UNK     0       2.802   1.574   2.352  0.00  0.00           O+0
HETATM   27  C   UNK     0       3.481   0.144   0.650  0.00  0.00           C+0
HETATM   28  C   UNK     0       4.871   0.676   0.888  0.00  0.00           C+0
HETATM   29  O   UNK     0       3.496  -1.218   0.977  0.00  0.00           O+0
HETATM   30  H   UNK     0       2.515  -1.841  -0.758  0.00  0.00           H+0
HETATM   31  H   UNK     0       3.946  -1.423  -1.715  0.00  0.00           H+0
HETATM   32  H   UNK     0       2.364  -0.980  -2.387  0.00  0.00           H+0
HETATM   33  H   UNK     0       3.857   0.818  -1.315  0.00  0.00           H+0
HETATM   34  H   UNK     0       0.052   1.452  -0.297  0.00  0.00           H+0
HETATM   35  H   UNK     0      -2.025   2.657  -2.430  0.00  0.00           H+0
HETATM   36  H   UNK     0      -3.559   3.176  -0.054  0.00  0.00           H+0
HETATM   37  H   UNK     0      -4.299   2.220   2.155  0.00  0.00           H+0
HETATM   38  H   UNK     0      -4.048   0.642   3.858  0.00  0.00           H+0
HETATM   39  H   UNK     0      -2.801  -0.691   3.608  0.00  0.00           H+0
HETATM   40  H   UNK     0       0.281   0.696  -4.061  0.00  0.00           H+0
HETATM   41  H   UNK     0      -0.008  -1.970  -3.887  0.00  0.00           H+0
HETATM   42  H   UNK     0      -0.966  -2.371  -1.627  0.00  0.00           H+0
HETATM   43  H   UNK     0      -2.696  -2.522  -3.016  0.00  0.00           H+0
HETATM   44  H   UNK     0       0.859  -0.646   1.530  0.00  0.00           H+0
HETATM   45  H   UNK     0       0.752   1.521   2.853  0.00  0.00           H+0
HETATM   46  H   UNK     0       5.583  -0.050   0.429  0.00  0.00           H+0
HETATM   47  H   UNK     0       5.053   0.653   1.978  0.00  0.00           H+0
HETATM   48  H   UNK     0       5.013   1.704   0.491  0.00  0.00           H+0
HETATM   49  H   UNK     0       4.338  -1.492   1.395  0.00  0.00           H+0
CONECT    1    2   30   31   32                                             
CONECT    2    1    3   27   33                                             
CONECT    3    2    4                                                       
CONECT    4    3    5   23   34                                             
CONECT    5    4    6                                                       
CONECT    6    5    7   18   21                                             
CONECT    7    6    8   19                                                  
CONECT    8    7    9   35                                                  
CONECT    9    8   10   18                                                  
CONECT   10    9   11   36                                                  
CONECT   11   10   12   37                                                  
CONECT   12   11   13   16                                                  
CONECT   13   12   14   38   39                                             
CONECT   14   13   15                                                       
CONECT   15   14                                                            
CONECT   16   12   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16    6    9                                                  
CONECT   19    7   20   40                                                  
CONECT   20   19   21   41                                                  
CONECT   21   20   22    6   42                                             
CONECT   22   21   43                                                       
CONECT   23    4   24   25   44                                             
CONECT   24   23   45                                                       
CONECT   25   23   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28   29    2                                             
CONECT   28   27   46   47   48                                             
CONECT   29   27   49                                                       
CONECT   30    1                                                            
CONECT   31    1                                                            
CONECT   32    1                                                            
CONECT   33    2                                                            
CONECT   34    4                                                            
CONECT   35    8                                                            
CONECT   36   10                                                            
CONECT   37   11                                                            
CONECT   38   13                                                            
CONECT   39   13                                                            
CONECT   40   19                                                            
CONECT   41   20                                                            
CONECT   42   21                                                            
CONECT   43   22                                                            
CONECT   44   23                                                            
CONECT   45   24                                                            
CONECT   46   28                                                            
CONECT   47   28                                                            
CONECT   48   28                                                            
CONECT   49   29                                                            
MASTER        0    0    0    0    0    0    0    0   49    0  104    0
END

RDKit          3D

49 52  0  0  0  0  0  0  0  0999 V2000
    2.9196   -1.0685   -1.4405 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0344    0.2931   -0.7836 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9059    1.0671   -0.9294 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7948    0.6273   -0.2503 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2232   -0.5081   -0.7716 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1067   -0.3236   -1.2204 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1159    0.7404   -2.2860 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8394    1.7223   -1.8758 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3971    1.4302   -0.5453 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2427    2.1956    0.2750 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6461    1.6720    1.4811 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2272    0.4158    1.8790 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6770   -0.1508    3.2070 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7158   -1.1538    2.9651 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5319   -1.9655    2.7629 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4094   -0.2818    1.0478 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8764   -1.8559    1.5220 Cl  0  0  0  0  0  0  0  0  0  0  0  0
   -1.9451    0.1793   -0.2095 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3103    0.1041   -3.3513 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4530   -1.2127   -3.2675 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3748   -1.4614   -2.1198 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.6482   -1.7280   -2.4620 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0456    0.4013    1.2236 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2689    1.2554    2.0345 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4617    0.7864    1.4975 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8023    1.5736    2.3519 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4809    0.1436    0.6501 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.8706    0.6756    0.8877 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4958   -1.2184    0.9768 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5152   -1.8406   -0.7575 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9456   -1.4234   -1.7152 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3636   -0.9796   -2.3869 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8573    0.8175   -1.3145 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0524    1.4518   -0.2971 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0249    2.6573   -2.4300 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5588    3.1756   -0.0540 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2993    2.2196    2.1549 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0476    0.6420    3.8585 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8006   -0.6912    3.6084 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2808    0.6961   -4.0609 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0076   -1.9699   -3.8872 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9662   -2.3713   -1.6267 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6961   -2.5218   -3.0163 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8594   -0.6460    1.5302 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7524    1.5213    2.8529 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5830   -0.0499    0.4285 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0532    0.6531    1.9780 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0131    1.7045    0.4909 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3383   -1.4922    1.3952 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  6  5  1  1
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  1  0
 14 15  3  0
 12 16  1  0
 16 17  1  0
 16 18  2  0
  7 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  1  0
  4 23  1  0
 23 24  1  0
 23 25  1  0
 25 26  2  0
 25 27  1  0
 27 28  1  0
 27 29  1  1
 27  2  1  0
 18  6  1  0
 21  6  1  0
 18  9  1  0
  1 30  1  0
  1 31  1  0
  1 32  1  0
  2 33  1  6
  4 34  1  1
  8 35  1  0
 10 36  1  0
 11 37  1  0
 13 38  1  0
 13 39  1  0
 19 40  1  0
 20 41  1  0
 21 42  1  1
 22 43  1  0
 23 44  1  1
 24 45  1  0
 28 46  1  0
 28 47  1  0
 28 48  1  0
 29 49  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₂₁H₂₀ClNO₆

Average Mass

417.8400 Da

Monoisotopic Mass

417.09792 Da

IUPAC Name

2-[(3S,3aR)-4-chloro-3a-{[(2S,3S,5S,6R)-3,5-dihydroxy-5,6-dimethyl-4-oxooxan-2-yl]oxy}-3-hydroxy-3H,3aH-cyclopenta[a]inden-5-yl]acetonitrile

Traditional Name

2-[(3S,3aR)-4-chloro-3a-{[(2S,3S,5S,6R)-3,5-dihydroxy-5,6-dimethyl-4-oxooxan-2-yl]oxy}-3-hydroxy-3H-cyclopenta[a]inden-5-yl]acetonitrile

CAS Registry Number

Not Available

SMILES

C[C@H]1O[C@@H](O[C@]23[C@@H](O)C=CC2=CC2=C3C(Cl)=C(CC#N)C=C2)[C@H](O)C(=O)[C@@]1(C)O

InChI Identifier

InChI=1S/C21H20ClNO6/c1-10-20(2,27)18(26)17(25)19(28-10)29-21-13(5-6-14(21)24)9-12-4-3-11(7-8-23)16(22)15(12)21/h3-6,9-10,14,17,19,24-25,27H,7H2,1-2H3/t10-,14+,17-,19+,20+,21+/m1/s1

InChI Key

FMQYEPDNLFRUQP-LPYYISIISA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Salinispora pacifica	NPAtlas	16524258

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.71	ALOGPS
logP	1.55	ChemAxon
logS	-3.5	ALOGPS
pKa (Strongest Acidic)	11.35	ChemAxon
pKa (Strongest Basic)	-3.5	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	120.01 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	105.29 m³·mol⁻¹	ChemAxon
Polarizability	39.69 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA002562

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

9879136

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

11704413

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for Cyanosporaside A (NP0006243)

MOL for NP0006243 (Cyanosporaside A)

3D MOL for NP0006243 (Cyanosporaside A)

3D SDF for NP0006243 (Cyanosporaside A)

3D-SDF for NP0006243 (Cyanosporaside A)

PDB for NP0006243 (Cyanosporaside A)

3D PDB for NP0006243 (Cyanosporaside A)

SMILES for NP0006243 (Cyanosporaside A)

INCHI for NP0006243 (Cyanosporaside A)

Structure for NP0006243 (Cyanosporaside A)

3D Structure for NP0006243 (Cyanosporaside A)