Np mrd loader

Record Information
Version2.0
Created at2020-12-09 02:55:03 UTC
Updated at2021-07-15 16:52:54 UTC
NP-MRD IDNP0005758
Secondary Accession NumbersNone
Natural Product Identification
Common NameRo 09-1679
Provided ByNPAtlasNPAtlas Logo
Description Ro 09-1679 is found in Mortierella alpina N_r6773 and Streptomyces. Ro 09-1679 was first documented in 1992 (PMID: 1577670). Based on a literature review very few articles have been published on (2E)-3-{[4-carbamimidamido-1-({1-[(5-carbamimidamido-1-oxopentan-2-yl)-C-hydroxycarbonimidoyl]-3-methylbutyl}-C-hydroxycarbonimidoyl)butyl]-C-hydroxycarbonimidoyl}prop-2-enoic acid.
Structure
Thumb
Synonyms
ValueSource
(2E)-3-{[4-carbamimidamido-1-({1-[(5-carbamimidamido-1-oxopentan-2-yl)-C-hydroxycarbonimidoyl]-3-methylbutyl}-C-hydroxycarbonimidoyl)butyl]-C-hydroxycarbonimidoyl}prop-2-enoateGenerator
Chemical FormulaC22H39N9O6
Average Mass525.6110 Da
Monoisotopic Mass525.30233 Da
IUPAC Name(2E)-3-{[(1R)-4-[(diaminomethylidene)amino]-1-{[(1R)-1-{[(2R)-5-[(diaminomethylidene)amino]-1-oxopentan-2-yl]carbamoyl}-3-methylbutyl]carbamoyl}butyl]carbamoyl}prop-2-enoic acid
Traditional Name(2E)-3-{[(1R)-4-[(diaminomethylidene)amino]-1-{[(1R)-1-{[(2R)-5-[(diaminomethylidene)amino]-1-oxopentan-2-yl]carbamoyl}-3-methylbutyl]carbamoyl}butyl]carbamoyl}prop-2-enoic acid
CAS Registry NumberNot Available
SMILES
CC(C)CC(NC(=O)C(CCCN=C(N)N)NC(=O)\C=C\C(O)=O)C(=O)NC(CCCN=C(N)N)C=O
InChI Identifier
InChI=1S/C22H39N9O6/c1-13(2)11-16(20(37)29-14(12-32)5-3-9-27-21(23)24)31-19(36)15(6-4-10-28-22(25)26)30-17(33)7-8-18(34)35/h7-8,12-16H,3-6,9-11H2,1-2H3,(H,29,37)(H,30,33)(H,31,36)(H,34,35)(H4,23,24,27)(H4,25,26,28)/b8-7+
InChI KeyJEMQVKFJKHWGJB-BQYQJAHWSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Mortierella alpina N_r6773Fungi
StreptomycesNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-1.1ALOGPS
logP-4.4ChemAxon
logS-4.1ALOGPS
pKa (Strongest Acidic)3.18ChemAxon
pKa (Strongest Basic)11.4ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count12ChemAxon
Hydrogen Donor Count8ChemAxon
Polar Surface Area270.47 ŲChemAxon
Rotatable Bond Count18ChemAxon
Refractivity135.51 m³·mol⁻¹ChemAxon
Polarizability55.43 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA011368
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78444197
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139586248
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Kamiyama T, Umino T, Nakayama N, Itezono Y, Satoh T, Yamashita Y, Yamaguchi A, Yokose K: Ro 09-1679, a novel thrombin inhibitor. J Antibiot (Tokyo). 1992 Mar;45(3):424-7. doi: 10.7164/antibiotics.45.424. [PubMed:1577670 ]