Np mrd loader

Record Information
Version2.0
Created at2020-12-09 02:55:00 UTC
Updated at2021-07-15 16:52:54 UTC
NP-MRD IDNP0005757
Secondary Accession NumbersNone
Natural Product Identification
Common NameGlucolanomycin
Provided ByNPAtlasNPAtlas Logo
Description Glucolanomycin is found in Pycnidiophora and Westerdykella dispersa. Glucolanomycin was first documented in 1992 (PMID: 1577669). Based on a literature review very few articles have been published on Glucolanomycin.
Structure
Data?1624574493
Synonyms
ValueSource
(2S,3R,4S,5S)-4-Methoxy-5-methyl-2-[(2E,4E,6E)-octa-2,4,6-trien-2-yl]oxan-3-yl 2-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]amino}acetic acidGenerator
Chemical FormulaC23H37NO9
Average Mass471.5470 Da
Monoisotopic Mass471.24683 Da
IUPAC Name(2S,3R,4S,5S)-4-methoxy-5-methyl-2-[(2E,4E,6E)-octa-2,4,6-trien-2-yl]oxan-3-yl 2-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]amino}acetate
Traditional Name(2S,3R,4S,5S)-4-methoxy-5-methyl-2-[(2E,4E,6E)-octa-2,4,6-trien-2-yl]oxan-3-yl {[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]amino}acetate
CAS Registry NumberNot Available
SMILES
CO[C@H]1[C@@H](C)CO[C@H]([C@@H]1OC(=O)CN[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)C(\C)=C\C=C\C=C\C
InChI Identifier
InChI=1S/C23H37NO9/c1-5-6-7-8-9-13(2)21-22(20(30-4)14(3)12-31-21)33-16(26)10-24-23-19(29)18(28)17(27)15(11-25)32-23/h5-9,14-15,17-25,27-29H,10-12H2,1-4H3/b6-5+,8-7+,13-9+/t14-,15+,17+,18-,19+,20-,21-,22+,23+/m0/s1
InChI KeyOYYWJRVVYVMXBN-CGDKZCTRSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
PycnidiophoraNPAtlas
Westerdykella dispersaLOTUS Database
Species Where Detected
Species NameSourceReference
Pycnidiophora dispersaKNApSAcK Database
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.98ALOGPS
logP-0.11ChemAxon
logS-2.7ALOGPS
pKa (Strongest Acidic)12.45ChemAxon
pKa (Strongest Basic)3.88ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count9ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area146.94 ŲChemAxon
Rotatable Bond Count10ChemAxon
Refractivity121.38 m³·mol⁻¹ChemAxon
Polarizability50.68 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA007672
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00017246
Chemspider ID57260550
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound101623352
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Remsburg B, Phillipson DW, O'Sullivan J: Lanomycin and glucolanomycin, antifungal agents produced by Pycnidiophora dispersa. III. Biosynthesis of lanomycin: 13C NMR assignment and origin of the carbon skeleton. J Antibiot (Tokyo). 1992 Mar;45(3):420-3. doi: 10.7164/antibiotics.45.420. [PubMed:1577669 ]