NP-MRD: Showing NP-Card for Communesin H (NP0005716)

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Record Information

Version

1.0

Created at

2020-12-09 02:53:21 UTC

Updated at

2021-07-15 16:52:47 UTC

NP-MRD ID

NP0005716

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Communesin H

Provided By

NPAtlas

Description

Communesin H is found in Penicillium. It was first documented in 2005 (PMID: 15730257). Based on a literature review very few articles have been published on Communesin H (PMID: 27244250).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242118223D          

 72 79  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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 16 52  1  0
 17 53  1  6
 19 54  1  0
 19 55  1  0
 19 56  1  0
 21 57  1  0
 22 58  1  0
 23 59  1  0
 27 60  1  0
 27 61  1  0
 28 62  1  0
 28 63  1  0
 30 64  1  1
 31 65  1  6
 34 66  1  0
 34 67  1  0
 34 68  1  0
 35 69  1  0
 35 70  1  0
 35 71  1  0
 36 72  1  1
M  END


  Mrv1652306242118223D          

 72 79  0  0  0  0            999 V2000
    6.7111    1.4431   -0.2845 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2725    1.5266    0.0813 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.4202    0.4826   -0.5843 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.0018    0.6251   -0.1750 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7163    1.5489    0.6295 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9849   -0.2452   -0.6663 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.1293   -1.3401   -1.5797 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7828   -1.9930   -1.6949 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.0368   -1.4911   -0.5240 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2099   -2.4180    0.6105 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1725   -2.2235    1.5496 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3839   -3.1422    2.5916 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5857   -4.2653    2.6488 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4048   -4.4640    1.6818 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6029   -3.5634    0.6719 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6076   -3.7249   -0.3196 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3380   -2.5412   -0.8015 C   0  0  1  0  0  0  0  0  0  0  0  0
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   -2.5652    1.5743    1.3392 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8114    0.8889    0.4228 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1484   -0.4002    0.1222 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4998   -1.3387   -0.8173 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.5948   -0.6130   -2.1661 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6971    0.5635   -2.2255 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0091    0.9247   -1.0544 N   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6964    1.7543   -0.1270 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2371    3.0190   -0.7032 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1311    3.8196   -1.2408 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8893    4.3406   -0.1983 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.8004    5.4905   -0.5702 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1892    4.5386    1.1253 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5771   -0.1619   -0.3112 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.1755    0.5209    0.0641 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7788    1.5582   -1.4030 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2392    2.2945    0.1924 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8379    2.5100   -0.1354 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1586    1.3627    1.1916 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4641    0.6721   -1.6777 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8261   -0.5263   -0.3310 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9370   -2.0514   -1.2772 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4786   -0.9268   -2.5684 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3248   -1.8996   -2.6684 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9597   -3.0998   -1.5501 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8125   -1.3685    1.5429 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1605   -2.9521    3.3207 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7476   -4.9727    3.4493 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0394   -5.3525    1.7166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7837   -4.6920   -0.6549 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7961   -2.7828   -1.8033 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8349   -4.2373    1.0027 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0026   -3.6109   -0.2279 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9799   -2.9495    1.4169 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8049   -0.7896    2.0991 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2620    1.4966    2.6799 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3081    2.5846    1.5811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6773   -0.2688   -2.2006 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5318   -1.3199   -3.0091 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0241    0.4197   -3.1159 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3025    1.4679   -2.5401 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0227    1.9673    0.7224 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0662    2.9688   -1.4273 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8622    5.1578   -0.5360 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6337    5.8193   -1.6294 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6395    6.3794    0.0562 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9409    4.5225    1.9386 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5945    3.8113    1.3324 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2195    5.5910    1.1350 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5743    0.0594    0.7960 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  9  8  1  6  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
 20 21  2  0  0  0  0
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 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  6  0  0  0
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 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  6  0  0  0
 33 35  1  0  0  0  0
 29 36  1  0  0  0  0
 36  6  1  0  0  0  0
 26  9  1  0  0  0  0
 33 31  1  0  0  0  0
 36  9  1  0  0  0  0
 15 10  1  0  0  0  0
 26 17  1  0  0  0  0
 25 20  1  0  0  0  0
 30 24  1  0  0  0  0
  1 37  1  0  0  0  0
  1 38  1  0  0  0  0
  1 39  1  0  0  0  0
  2 40  1  0  0  0  0
  2 41  1  0  0  0  0
  3 42  1  0  0  0  0
  3 43  1  0  0  0  0
  7 44  1  0  0  0  0
  7 45  1  0  0  0  0
  8 46  1  0  0  0  0
  8 47  1  0  0  0  0
 11 48  1  0  0  0  0
 12 49  1  0  0  0  0
 13 50  1  0  0  0  0
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 16 52  1  0  0  0  0
 17 53  1  6  0  0  0
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 22 58  1  0  0  0  0
 23 59  1  0  0  0  0
 27 60  1  0  0  0  0
 27 61  1  0  0  0  0
 28 62  1  0  0  0  0
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 30 64  1  1  0  0  0
 31 65  1  6  0  0  0
 34 66  1  0  0  0  0
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 34 68  1  0  0  0  0
 35 69  1  0  0  0  0
 35 70  1  0  0  0  0
 35 71  1  0  0  0  0
 36 72  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0005716

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]N1C2=C([H])C([H])=C([H])C([H])=C2[C@]23C([H])([H])C([H])([H])N(C(=O)C([H])([H])C([H])([H])C([H])([H])[H])[C@@]2([H])N2C([H])([H])C([H])([H])[C@]33C4=C(C([H])=C([H])C([H])=C4N(C([H])([H])[H])[C@]13[H])[C@]2([H])[C@]1([H])OC1(C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C30H36N4O2/c1-5-9-22(35)33-16-14-29-19-11-6-7-12-20(19)31-26-30(29)15-17-34(27(29)33)24(25-28(2,3)36-25)18-10-8-13-21(23(18)30)32(26)4/h6-8,10-13,24-27,31H,5,9,14-17H2,1-4H3/t24-,25+,26+,27+,29-,30-/m1/s1

> <INCHI_KEY>
RMGREFLDMCGIFA-WFMSWEOJSA-N

> <FORMULA>
C30H36N4O2

> <MOLECULAR_WEIGHT>
484.644

> <EXACT_MASS>
484.283826415

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
72

> <JCHEM_AVERAGE_POLARIZABILITY>
54.70566720458967

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
1-[(2R,6S,14S,22S,25R)-25-[(2S)-3,3-dimethyloxiran-2-yl]-15-methyl-1,3,13,15-tetraazaheptacyclo[18.4.1.0^{2,6}.0^{6,22}.0^{7,12}.0^{14,22}.0^{16,21}]pentacosa-7,9,11,16,18,20-hexaen-3-yl]butan-1-one

> <ALOGPS_LOGP>
4.10

> <JCHEM_LOGP>
4.203565702333334

> <ALOGPS_LOGS>
-3.91

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
8

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
15.41075070697842

> <JCHEM_PKA_STRONGEST_BASIC>
6.303049976492082

> <JCHEM_POLAR_SURFACE_AREA>
51.35000000000001

> <JCHEM_REFRACTIVITY>
141.6686

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
5.95e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
1-[(2R,6S,14S,22S,25R)-25-[(2S)-3,3-dimethyloxiran-2-yl]-15-methyl-1,3,13,15-tetraazaheptacyclo[18.4.1.0^{2,6}.0^{6,22}.0^{7,12}.0^{14,22}.0^{16,21}]pentacosa-7,9,11,16,18,20-hexaen-3-yl]butan-1-one

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 72 79  0  0  0  0  0  0  0  0999 V2000
    6.7111    1.4431   -0.2845 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2725    1.5266    0.0813 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4202    0.4826   -0.5843 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0018    0.6251   -0.1750 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7163    1.5489    0.6295 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9849   -0.2452   -0.6663 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.1293   -1.3401   -1.5797 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7828   -1.9930   -1.6949 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0368   -1.4911   -0.5240 C   0  0  2  0  0  0  0  0  0  0  0  0
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    1.3839   -3.1422    2.5916 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.9799   -2.9495    1.4169 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8049   -0.7896    2.0991 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2620    1.4966    2.6799 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3081    2.5846    1.5811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6773   -0.2688   -2.2006 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5318   -1.3199   -3.0091 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0241    0.4197   -3.1159 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3025    1.4679   -2.5401 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0227    1.9673    0.7224 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0662    2.9688   -1.4273 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8622    5.1578   -0.5360 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6337    5.8193   -1.6294 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6395    6.3794    0.0562 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9409    4.5225    1.9386 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5945    3.8113    1.3324 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2195    5.5910    1.1350 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5743    0.0594    0.7960 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  2  0
  4  6  1  0
  6  7  1  0
  7  8  1  0
  9  8  1  6
  9 10  1  0
 10 11  2  0
 11 12  1  0
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 13 14  1  0
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 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 18 20  1  0
 20 21  2  0
 21 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  2  0
 25 26  1  0
 26 27  1  6
 27 28  1  0
 28 29  1  0
 29 30  1  0
 30 31  1  0
 31 32  1  0
 32 33  1  0
 33 34  1  6
 33 35  1  0
 29 36  1  0
 36  6  1  0
 26  9  1  0
 33 31  1  0
 36  9  1  0
 15 10  1  0
 26 17  1  0
 25 20  1  0
 30 24  1  0
  1 37  1  0
  1 38  1  0
  1 39  1  0
  2 40  1  0
  2 41  1  0
  3 42  1  0
  3 43  1  0
  7 44  1  0
  7 45  1  0
  8 46  1  0
  8 47  1  0
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 17 53  1  6
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 23 59  1  0
 27 60  1  0
 27 61  1  0
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 30 64  1  1
 31 65  1  6
 34 66  1  0
 34 67  1  0
 34 68  1  0
 35 69  1  0
 35 70  1  0
 35 71  1  0
 36 72  1  1
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0       6.711   1.443  -0.285  0.00  0.00           C+0
HETATM    2  C   UNK     0       5.272   1.527   0.081  0.00  0.00           C+0
HETATM    3  C   UNK     0       4.420   0.483  -0.584  0.00  0.00           C+0
HETATM    4  C   UNK     0       3.002   0.625  -0.175  0.00  0.00           C+0
HETATM    5  O   UNK     0       2.716   1.549   0.630  0.00  0.00           O+0
HETATM    6  N   UNK     0       1.985  -0.245  -0.666  0.00  0.00           N+0
HETATM    7  C   UNK     0       2.129  -1.340  -1.580  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.783  -1.993  -1.695  0.00  0.00           C+0
HETATM    9  C   UNK     0      -0.037  -1.491  -0.524  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.210  -2.418   0.611  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.173  -2.224   1.550  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.384  -3.142   2.592  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.586  -4.265   2.649  0.00  0.00           C+0
HETATM   14  C   UNK     0      -0.405  -4.464   1.682  0.00  0.00           C+0
HETATM   15  C   UNK     0      -0.603  -3.563   0.672  0.00  0.00           C+0
HETATM   16  N   UNK     0      -1.608  -3.725  -0.320  0.00  0.00           N+0
HETATM   17  C   UNK     0      -2.338  -2.541  -0.802  0.00  0.00           C+0
HETATM   18  N   UNK     0      -3.346  -2.334   0.197  0.00  0.00           N+0
HETATM   19  C   UNK     0      -4.328  -3.302   0.610  0.00  0.00           C+0
HETATM   20  C   UNK     0      -3.210  -1.029   0.701  0.00  0.00           C+0
HETATM   21  C   UNK     0      -3.961  -0.301   1.633  0.00  0.00           C+0
HETATM   22  C   UNK     0      -3.639   0.987   1.947  0.00  0.00           C+0
HETATM   23  C   UNK     0      -2.565   1.574   1.339  0.00  0.00           C+0
HETATM   24  C   UNK     0      -1.811   0.889   0.423  0.00  0.00           C+0
HETATM   25  C   UNK     0      -2.148  -0.400   0.122  0.00  0.00           C+0
HETATM   26  C   UNK     0      -1.500  -1.339  -0.817  0.00  0.00           C+0
HETATM   27  C   UNK     0      -1.595  -0.613  -2.166  0.00  0.00           C+0
HETATM   28  C   UNK     0      -0.697   0.564  -2.225  0.00  0.00           C+0
HETATM   29  N   UNK     0       0.009   0.925  -1.054  0.00  0.00           N+0
HETATM   30  C   UNK     0      -0.696   1.754  -0.127  0.00  0.00           C+0
HETATM   31  C   UNK     0      -1.237   3.019  -0.703  0.00  0.00           C+0
HETATM   32  O   UNK     0      -0.131   3.820  -1.241  0.00  0.00           O+0
HETATM   33  C   UNK     0      -0.889   4.341  -0.198  0.00  0.00           C+0
HETATM   34  C   UNK     0      -1.800   5.490  -0.570  0.00  0.00           C+0
HETATM   35  C   UNK     0      -0.189   4.539   1.125  0.00  0.00           C+0
HETATM   36  C   UNK     0       0.577  -0.162  -0.311  0.00  0.00           C+0
HETATM   37  H   UNK     0       7.176   0.521   0.064  0.00  0.00           H+0
HETATM   38  H   UNK     0       6.779   1.558  -1.403  0.00  0.00           H+0
HETATM   39  H   UNK     0       7.239   2.295   0.192  0.00  0.00           H+0
HETATM   40  H   UNK     0       4.838   2.510  -0.135  0.00  0.00           H+0
HETATM   41  H   UNK     0       5.159   1.363   1.192  0.00  0.00           H+0
HETATM   42  H   UNK     0       4.464   0.672  -1.678  0.00  0.00           H+0
HETATM   43  H   UNK     0       4.826  -0.526  -0.331  0.00  0.00           H+0
HETATM   44  H   UNK     0       2.937  -2.051  -1.277  0.00  0.00           H+0
HETATM   45  H   UNK     0       2.479  -0.927  -2.568  0.00  0.00           H+0
HETATM   46  H   UNK     0       0.325  -1.900  -2.668  0.00  0.00           H+0
HETATM   47  H   UNK     0       0.960  -3.100  -1.550  0.00  0.00           H+0
HETATM   48  H   UNK     0       1.813  -1.369   1.543  0.00  0.00           H+0
HETATM   49  H   UNK     0       2.160  -2.952   3.321  0.00  0.00           H+0
HETATM   50  H   UNK     0       0.748  -4.973   3.449  0.00  0.00           H+0
HETATM   51  H   UNK     0      -1.039  -5.353   1.717  0.00  0.00           H+0
HETATM   52  H   UNK     0      -1.784  -4.692  -0.655  0.00  0.00           H+0
HETATM   53  H   UNK     0      -2.796  -2.783  -1.803  0.00  0.00           H+0
HETATM   54  H   UNK     0      -3.835  -4.237   1.003  0.00  0.00           H+0
HETATM   55  H   UNK     0      -5.003  -3.611  -0.228  0.00  0.00           H+0
HETATM   56  H   UNK     0      -4.980  -2.950   1.417  0.00  0.00           H+0
HETATM   57  H   UNK     0      -4.805  -0.790   2.099  0.00  0.00           H+0
HETATM   58  H   UNK     0      -4.262   1.497   2.680  0.00  0.00           H+0
HETATM   59  H   UNK     0      -2.308   2.585   1.581  0.00  0.00           H+0
HETATM   60  H   UNK     0      -2.677  -0.269  -2.201  0.00  0.00           H+0
HETATM   61  H   UNK     0      -1.532  -1.320  -3.009  0.00  0.00           H+0
HETATM   62  H   UNK     0      -0.024   0.420  -3.116  0.00  0.00           H+0
HETATM   63  H   UNK     0      -1.303   1.468  -2.540  0.00  0.00           H+0
HETATM   64  H   UNK     0      -0.023   1.967   0.722  0.00  0.00           H+0
HETATM   65  H   UNK     0      -2.066   2.969  -1.427  0.00  0.00           H+0
HETATM   66  H   UNK     0      -2.862   5.158  -0.536  0.00  0.00           H+0
HETATM   67  H   UNK     0      -1.634   5.819  -1.629  0.00  0.00           H+0
HETATM   68  H   UNK     0      -1.640   6.379   0.056  0.00  0.00           H+0
HETATM   69  H   UNK     0      -0.941   4.523   1.939  0.00  0.00           H+0
HETATM   70  H   UNK     0       0.595   3.811   1.332  0.00  0.00           H+0
HETATM   71  H   UNK     0       0.220   5.591   1.135  0.00  0.00           H+0
HETATM   72  H   UNK     0       0.574   0.059   0.796  0.00  0.00           H+0
CONECT    1    2   37   38   39                                             
CONECT    2    1    3   40   41                                             
CONECT    3    2    4   42   43                                             
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7   36                                                  
CONECT    7    6    8   44   45                                             
CONECT    8    7    9   46   47                                             
CONECT    9    8   10   26   36                                             
CONECT   10    9   11   15                                                  
CONECT   11   10   12   48                                                  
CONECT   12   11   13   49                                                  
CONECT   13   12   14   50                                                  
CONECT   14   13   15   51                                                  
CONECT   15   14   16   10                                                  
CONECT   16   15   17   52                                                  
CONECT   17   16   18   26   53                                             
CONECT   18   17   19   20                                                  
CONECT   19   18   54   55   56                                             
CONECT   20   18   21   25                                                  
CONECT   21   20   22   57                                                  
CONECT   22   21   23   58                                                  
CONECT   23   22   24   59                                                  
CONECT   24   23   25   30                                                  
CONECT   25   24   26   20                                                  
CONECT   26   25   27    9   17                                             
CONECT   27   26   28   60   61                                             
CONECT   28   27   29   62   63                                             
CONECT   29   28   30   36                                                  
CONECT   30   29   31   24   64                                             
CONECT   31   30   32   33   65                                             
CONECT   32   31   33                                                       
CONECT   33   32   34   35   31                                             
CONECT   34   33   66   67   68                                             
CONECT   35   33   69   70   71                                             
CONECT   36   29    6    9   72                                             
CONECT   37    1                                                            
CONECT   38    1                                                            
CONECT   39    1                                                            
CONECT   40    2                                                            
CONECT   41    2                                                            
CONECT   42    3                                                            
CONECT   43    3                                                            
CONECT   44    7                                                            
CONECT   45    7                                                            
CONECT   46    8                                                            
CONECT   47    8                                                            
CONECT   48   11                                                            
CONECT   49   12                                                            
CONECT   50   13                                                            
CONECT   51   14                                                            
CONECT   52   16                                                            
CONECT   53   17                                                            
CONECT   54   19                                                            
CONECT   55   19                                                            
CONECT   56   19                                                            
CONECT   57   21                                                            
CONECT   58   22                                                            
CONECT   59   23                                                            
CONECT   60   27                                                            
CONECT   61   27                                                            
CONECT   62   28                                                            
CONECT   63   28                                                            
CONECT   64   30                                                            
CONECT   65   31                                                            
CONECT   66   34                                                            
CONECT   67   34                                                            
CONECT   68   34                                                            
CONECT   69   35                                                            
CONECT   70   35                                                            
CONECT   71   35                                                            
CONECT   72   36                                                            
MASTER        0    0    0    0    0    0    0    0   72    0  158    0
END

RDKit          3D

72 79  0  0  0  0  0  0  0  0999 V2000
    6.7111    1.4431   -0.2845 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2725    1.5266    0.0813 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4202    0.4826   -0.5843 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0018    0.6251   -0.1750 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7163    1.5489    0.6295 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9849   -0.2452   -0.6663 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.1293   -1.3401   -1.5797 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7828   -1.9930   -1.6949 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0368   -1.4911   -0.5240 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2099   -2.4180    0.6105 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1725   -2.2235    1.5496 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3839   -3.1422    2.5916 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5857   -4.2653    2.6488 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4048   -4.4640    1.6818 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6029   -3.5634    0.6719 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6076   -3.7249   -0.3196 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3380   -2.5412   -0.8015 C   0  0  1  0  0  0  0  0  0  0  0  0
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   -4.3284   -3.3017    0.6100 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2101   -1.0286    0.7005 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.6386    0.9867    1.9469 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5652    1.5743    1.3392 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8114    0.8889    0.4228 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.5948   -0.6130   -2.1661 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.6964    1.7543   -0.1270 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2371    3.0190   -0.7032 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1311    3.8196   -1.2408 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8893    4.3406   -0.1983 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.8004    5.4905   -0.5702 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1892    4.5386    1.1253 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5771   -0.1619   -0.3112 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.1755    0.5209    0.0641 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7788    1.5582   -1.4030 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2392    2.2945    0.1924 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8379    2.5100   -0.1354 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1586    1.3627    1.1916 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4641    0.6721   -1.6777 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8261   -0.5263   -0.3310 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9370   -2.0514   -1.2772 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4786   -0.9268   -2.5684 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3248   -1.8996   -2.6684 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9597   -3.0998   -1.5501 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8125   -1.3685    1.5429 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1605   -2.9521    3.3207 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7476   -4.9727    3.4493 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0394   -5.3525    1.7166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7837   -4.6920   -0.6549 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7961   -2.7828   -1.8033 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8349   -4.2373    1.0027 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0026   -3.6109   -0.2279 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9799   -2.9495    1.4169 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8049   -0.7896    2.0991 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2620    1.4966    2.6799 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3081    2.5846    1.5811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6773   -0.2688   -2.2006 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5318   -1.3199   -3.0091 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0241    0.4197   -3.1159 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3025    1.4679   -2.5401 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0227    1.9673    0.7224 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0662    2.9688   -1.4273 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8622    5.1578   -0.5360 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6337    5.8193   -1.6294 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6395    6.3794    0.0562 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9409    4.5225    1.9386 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5945    3.8113    1.3324 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2195    5.5910    1.1350 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5743    0.0594    0.7960 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  2  0
  4  6  1  0
  6  7  1  0
  7  8  1  0
  9  8  1  6
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 18 20  1  0
 20 21  2  0
 21 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  2  0
 25 26  1  0
 26 27  1  6
 27 28  1  0
 28 29  1  0
 29 30  1  0
 30 31  1  0
 31 32  1  0
 32 33  1  0
 33 34  1  6
 33 35  1  0
 29 36  1  0
 36  6  1  0
 26  9  1  0
 33 31  1  0
 36  9  1  0
 15 10  1  0
 26 17  1  0
 25 20  1  0
 30 24  1  0
  1 37  1  0
  1 38  1  0
  1 39  1  0
  2 40  1  0
  2 41  1  0
  3 42  1  0
  3 43  1  0
  7 44  1  0
  7 45  1  0
  8 46  1  0
  8 47  1  0
 11 48  1  0
 12 49  1  0
 13 50  1  0
 14 51  1  0
 16 52  1  0
 17 53  1  6
 19 54  1  0
 19 55  1  0
 19 56  1  0
 21 57  1  0
 22 58  1  0
 23 59  1  0
 27 60  1  0
 27 61  1  0
 28 62  1  0
 28 63  1  0
 30 64  1  1
 31 65  1  6
 34 66  1  0
 34 67  1  0
 34 68  1  0
 35 69  1  0
 35 70  1  0
 35 71  1  0
 36 72  1  1
M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₃₀H₃₆N₄O₂

Average Mass

484.6440 Da

Monoisotopic Mass

484.28383 Da

IUPAC Name

1-[(2R,6S,14S,22S,25R)-25-[(2S)-3,3-dimethyloxiran-2-yl]-15-methyl-1,3,13,15-tetraazaheptacyclo[18.4.1.0^{2,6}.0^{6,22}.0^{7,12}.0^{14,22}.0^{16,21}]pentacosa-7,9,11,16,18,20-hexaen-3-yl]butan-1-one

Traditional Name

1-[(2R,6S,14S,22S,25R)-25-[(2S)-3,3-dimethyloxiran-2-yl]-15-methyl-1,3,13,15-tetraazaheptacyclo[18.4.1.0^{2,6}.0^{6,22}.0^{7,12}.0^{14,22}.0^{16,21}]pentacosa-7,9,11,16,18,20-hexaen-3-yl]butan-1-one

CAS Registry Number

Not Available

SMILES

CCCC(=O)N1CC[C@@]23[C@@H]1N1CC[C@@]22[C@@H](NC4=CC=CC=C34)N(C)C3=CC=CC([C@@H]1[C@@H]1OC1(C)C)=C23

InChI Identifier

InChI=1S/C30H36N4O2/c1-5-9-22(35)33-16-14-29-19-11-6-7-12-20(19)31-26-30(29)15-17-34(27(29)33)24(25-28(2,3)36-25)18-10-8-13-21(23(18)30)32(26)4/h6-8,10-13,24-27,31H,5,9,14-17H2,1-4H3/t24-,25+,26+,27+,29-,30-/m1/s1

InChI Key

RMGREFLDMCGIFA-WFMSWEOJSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Penicillium	NPAtlas	15730257

Species Where Detected

Species Name	Source	Reference
Penicillium rivulum Frisvad	KNApSAcK Database	22123792

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.1	ALOGPS
logP	4.2	ChemAxon
logS	-3.9	ALOGPS
pKa (Strongest Acidic)	15.41	ChemAxon
pKa (Strongest Basic)	6.3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	51.35 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	141.67 m³·mol⁻¹	ChemAxon
Polarizability	54.71 Å³	ChemAxon
Number of Rings	8	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA008504

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00042407

Chemspider ID

9365989

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

11190910

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Dalsgaard PW, Blunt JW, Munro MH, Frisvad JC, Christophersen C: Communesins G and H, new alkaloids from the psychrotolerant fungus Penicillium rivulum. J Nat Prod. 2005 Feb;68(2):258-61. doi: 10.1021/np049646l. [PubMed:15730257 ]
Lathrop SP, Pompeo M, Chang WT, Movassaghi M: Convergent and Biomimetic Enantioselective Total Synthesis of (-)-Communesin F. J Am Chem Soc. 2016 Jun 22;138(24):7763-9. doi: 10.1021/jacs.6b04072. Epub 2016 Jun 14. [PubMed:27244250 ]

Showing NP-Card for Communesin H (NP0005716)

MOL for NP0005716 (Communesin H)

3D MOL for NP0005716 (Communesin H)

3D SDF for NP0005716 (Communesin H)

3D-SDF for NP0005716 (Communesin H)

PDB for NP0005716 (Communesin H)

3D PDB for NP0005716 (Communesin H)

SMILES for NP0005716 (Communesin H)

INCHI for NP0005716 (Communesin H)

Structure for NP0005716 (Communesin H)

3D Structure for NP0005716 (Communesin H)