Showing NP-Card for Pladienolide D (NP0005325)
| Record Information | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Version | 2.0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Created at | 2020-12-09 02:35:45 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Updated at | 2021-07-15 16:51:41 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| NP-MRD ID | NP0005325 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Secondary Accession Numbers | None | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural Product Identification | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Common Name | Pladienolide D | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Provided By | NPAtlas![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Description | Pladienolide D is found in Streptomyces. Based on a literature review very few articles have been published on (4Z)-7,10-dihydroxy-2-[(2E,4E)-6-hydroxy-6-{[3-(3-hydroxypentan-2-yl)oxiran-2-yl]methyl}hepta-2,4-dien-2-yl]-3,7-dimethyl-12-oxo-1-oxacyclododec-4-en-6-yl acetate. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Structure | MOL for NP0005325 (Pladienolide D)
Mrv1652307012118013D
87 88 0 0 0 0 999 V2000
11.0597 -1.2104 -0.4820 C 0 0 0 0 0 0 0 0 0 0 0 0
10.6689 0.1892 -0.8007 C 0 0 1 0 0 0 0 0 0 0 0 0
9.3382 0.6423 -0.2974 C 0 0 2 0 0 0 0 0 0 0 0 0
9.2314 0.5469 1.0980 O 0 0 0 0 0 0 0 0 0 0 0 0
8.1624 0.1235 -1.0298 C 0 0 1 0 0 0 0 0 0 0 0 0
8.0733 -1.3608 -0.9902 C 0 0 0 0 0 0 0 0 0 0 0 0
6.8694 0.7967 -0.6102 C 0 0 2 0 0 0 0 0 0 0 0 0
6.5133 0.6688 0.7668 O 0 0 0 0 0 0 0 0 0 0 0 0
5.6838 0.0420 -0.1827 C 0 0 1 0 0 0 0 0 0 0 0 0
4.3021 0.6438 -0.3886 C 0 0 2 0 0 0 0 0 0 0 0 0
3.2890 -0.3472 0.1408 C 0 0 1 0 0 0 0 0 0 0 0 0
3.4259 -1.6278 -0.6165 C 0 0 0 0 0 0 0 0 0 0 0 0
3.6781 -0.6155 1.4728 O 0 0 0 0 0 0 0 0 0 0 0 0
1.9044 0.1867 0.1103 C 0 0 0 0 0 0 0 0 0 0 0 0
0.9604 -0.1922 0.9376 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.4030 0.3632 0.8738 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.3354 -0.0314 1.7141 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.9266 -1.0618 2.7164 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.7338 0.4998 1.6605 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.0128 0.8956 3.0266 O 0 0 0 0 0 0 0 0 0 0 0 0
-4.3163 1.0029 3.5286 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.6262 1.7579 4.4786 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.3120 0.1668 2.8667 C 0 0 1 0 0 0 0 0 0 0 0 0
-6.7405 0.4064 2.9568 C 0 0 1 0 0 0 0 0 0 0 0 0
-7.0327 1.5252 3.7711 O 0 0 0 0 0 0 0 0 0 0 0 0
-7.2964 0.7441 1.5859 C 0 0 2 0 0 0 0 0 0 0 0 0
-6.8374 -0.0962 0.4614 C 0 0 2 0 0 0 0 0 0 0 0 0
-6.1715 0.5969 -0.7083 C 0 0 1 0 0 0 0 0 0 0 0 0
-7.1031 0.3231 -1.9178 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.1952 1.9655 -0.6801 O 0 0 0 0 0 0 0 0 0 0 0 0
-4.7724 0.0147 -0.9872 C 0 0 1 0 0 0 0 0 0 0 0 0
-5.0607 -0.8986 -2.0995 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.0191 -2.2432 -2.0466 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.3362 -3.0459 -3.2565 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.7053 -2.7881 -0.9474 O 0 0 0 0 0 0 0 0 0 0 0 0
-3.7668 0.8883 -1.4607 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.9823 1.5750 -0.6840 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.9705 1.5937 0.7205 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.7392 2.7929 1.3600 C 0 0 0 0 0 0 0 0 0 0 0 0
12.1173 -1.1650 -0.0829 H 0 0 0 0 0 0 0 0 0 0 0 0
11.1828 -1.8084 -1.4264 H 0 0 0 0 0 0 0 0 0 0 0 0
10.4072 -1.7400 0.2144 H 0 0 0 0 0 0 0 0 0 0 0 0
11.4405 0.9128 -0.4377 H 0 0 0 0 0 0 0 0 0 0 0 0
10.6318 0.2838 -1.9266 H 0 0 0 0 0 0 0 0 0 0 0 0
9.3550 1.7843 -0.4636 H 0 0 0 0 0 0 0 0 0 0 0 0
10.0937 0.2955 1.5217 H 0 0 0 0 0 0 0 0 0 0 0 0
8.2999 0.4071 -2.1116 H 0 0 0 0 0 0 0 0 0 0 0 0
8.8412 -1.8961 -1.5602 H 0 0 0 0 0 0 0 0 0 0 0 0
7.0980 -1.6620 -1.4757 H 0 0 0 0 0 0 0 0 0 0 0 0
8.0551 -1.7794 0.0491 H 0 0 0 0 0 0 0 0 0 0 0 0
6.7169 1.8523 -0.9515 H 0 0 0 0 0 0 0 0 0 0 0 0
5.7429 -1.0535 -0.1102 H 0 0 0 0 0 0 0 0 0 0 0 0
4.1353 0.8272 -1.4683 H 0 0 0 0 0 0 0 0 0 0 0 0
4.1912 1.5750 0.2150 H 0 0 0 0 0 0 0 0 0 0 0 0
2.4387 -2.0034 -0.9897 H 0 0 0 0 0 0 0 0 0 0 0 0
4.0304 -1.4497 -1.5251 H 0 0 0 0 0 0 0 0 0 0 0 0
3.9233 -2.4318 -0.0202 H 0 0 0 0 0 0 0 0 0 0 0 0
3.5012 -1.5587 1.7160 H 0 0 0 0 0 0 0 0 0 0 0 0
1.6443 0.9336 -0.6335 H 0 0 0 0 0 0 0 0 0 0 0 0
1.1752 -0.9268 1.6867 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.5691 1.0946 0.0892 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.1111 -0.6069 3.3145 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.7722 -1.2657 3.3727 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.5660 -1.9436 2.1552 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.2918 -0.4445 1.5701 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.0664 0.2792 1.7958 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.1087 -0.8917 3.2162 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.3337 -0.4798 3.3167 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.9692 1.3027 4.7276 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.0229 1.8222 1.3927 H 0 0 0 0 0 0 0 0 0 0 0 0
-8.4037 0.7733 1.7178 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.7757 -0.6565 0.1295 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1782 -0.9585 0.7395 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.2135 -0.7632 -2.0710 H 0 0 0 0 0 0 0 0 0 0 0 0
-8.0742 0.7357 -1.6234 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.7328 0.8690 -2.7987 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.1151 2.2648 -0.7212 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.5493 -0.7406 -0.2337 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.6428 -2.8324 -4.0956 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.3377 -4.1379 -2.9885 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.3638 -2.8385 -3.6408 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.6674 0.9789 -2.5881 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.2528 2.2118 -1.3099 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.9339 2.1612 0.9077 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.6089 3.6372 0.6733 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.3373 2.9931 2.3922 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.7882 2.6065 1.4885 H 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0 0 0 0
2 3 1 0 0 0 0
3 4 1 0 0 0 0
3 5 1 0 0 0 0
5 6 1 0 0 0 0
5 7 1 0 0 0 0
7 8 1 0 0 0 0
8 9 1 0 0 0 0
9 10 1 0 0 0 0
10 11 1 0 0 0 0
11 12 1 0 0 0 0
11 13 1 1 0 0 0
11 14 1 0 0 0 0
14 15 2 0 0 0 0
15 16 1 0 0 0 0
16 17 2 0 0 0 0
17 18 1 0 0 0 0
17 19 1 0 0 0 0
19 20 1 0 0 0 0
20 21 1 0 0 0 0
21 22 2 0 0 0 0
21 23 1 0 0 0 0
23 24 1 0 0 0 0
24 25 1 0 0 0 0
24 26 1 0 0 0 0
26 27 1 0 0 0 0
27 28 1 0 0 0 0
28 29 1 0 0 0 0
28 30 1 1 0 0 0
28 31 1 0 0 0 0
31 32 1 0 0 0 0
32 33 1 0 0 0 0
33 34 1 0 0 0 0
33 35 2 0 0 0 0
31 36 1 0 0 0 0
36 37 2 0 0 0 0
37 38 1 0 0 0 0
38 39 1 0 0 0 0
9 7 1 0 0 0 0
38 19 1 0 0 0 0
1 40 1 0 0 0 0
1 41 1 0 0 0 0
1 42 1 0 0 0 0
2 43 1 0 0 0 0
2 44 1 0 0 0 0
3 45 1 1 0 0 0
4 46 1 0 0 0 0
5 47 1 6 0 0 0
6 48 1 0 0 0 0
6 49 1 0 0 0 0
6 50 1 0 0 0 0
7 51 1 6 0 0 0
9 52 1 1 0 0 0
10 53 1 0 0 0 0
10 54 1 0 0 0 0
12 55 1 0 0 0 0
12 56 1 0 0 0 0
12 57 1 0 0 0 0
13 58 1 0 0 0 0
14 59 1 0 0 0 0
15 60 1 0 0 0 0
16 61 1 0 0 0 0
18 62 1 0 0 0 0
18 63 1 0 0 0 0
18 64 1 0 0 0 0
19 65 1 6 0 0 0
23 66 1 0 0 0 0
23 67 1 0 0 0 0
24 68 1 1 0 0 0
25 69 1 0 0 0 0
26 70 1 0 0 0 0
26 71 1 0 0 0 0
27 72 1 0 0 0 0
27 73 1 0 0 0 0
29 74 1 0 0 0 0
29 75 1 0 0 0 0
29 76 1 0 0 0 0
30 77 1 0 0 0 0
31 78 1 1 0 0 0
34 79 1 0 0 0 0
34 80 1 0 0 0 0
34 81 1 0 0 0 0
36 82 1 0 0 0 0
37 83 1 0 0 0 0
38 84 1 6 0 0 0
39 85 1 0 0 0 0
39 86 1 0 0 0 0
39 87 1 0 0 0 0
M END
3D MOL for NP0005325 (Pladienolide D)
RDKit 3D
87 88 0 0 0 0 0 0 0 0999 V2000
11.0597 -1.2104 -0.4820 C 0 0 0 0 0 0 0 0 0 0 0 0
10.6689 0.1892 -0.8007 C 0 0 0 0 0 0 0 0 0 0 0 0
9.3382 0.6423 -0.2974 C 0 0 2 0 0 0 0 0 0 0 0 0
9.2314 0.5469 1.0980 O 0 0 0 0 0 0 0 0 0 0 0 0
8.1624 0.1235 -1.0298 C 0 0 1 0 0 0 0 0 0 0 0 0
8.0733 -1.3608 -0.9902 C 0 0 0 0 0 0 0 0 0 0 0 0
6.8694 0.7967 -0.6102 C 0 0 2 0 0 0 0 0 0 0 0 0
6.5133 0.6688 0.7668 O 0 0 0 0 0 0 0 0 0 0 0 0
5.6838 0.0420 -0.1827 C 0 0 1 0 0 0 0 0 0 0 0 0
4.3021 0.6438 -0.3886 C 0 0 0 0 0 0 0 0 0 0 0 0
3.2890 -0.3472 0.1408 C 0 0 1 0 0 0 0 0 0 0 0 0
3.4259 -1.6278 -0.6165 C 0 0 0 0 0 0 0 0 0 0 0 0
3.6781 -0.6155 1.4728 O 0 0 0 0 0 0 0 0 0 0 0 0
1.9044 0.1867 0.1103 C 0 0 0 0 0 0 0 0 0 0 0 0
0.9604 -0.1922 0.9376 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.4030 0.3632 0.8738 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.3354 -0.0314 1.7141 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.9266 -1.0618 2.7164 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.7338 0.4998 1.6605 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.0128 0.8956 3.0266 O 0 0 0 0 0 0 0 0 0 0 0 0
-4.3163 1.0029 3.5286 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.6262 1.7579 4.4786 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.3120 0.1668 2.8667 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.7405 0.4064 2.9568 C 0 0 1 0 0 0 0 0 0 0 0 0
-7.0327 1.5252 3.7711 O 0 0 0 0 0 0 0 0 0 0 0 0
-7.2964 0.7441 1.5859 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.8374 -0.0962 0.4614 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.1715 0.5969 -0.7083 C 0 0 1 0 0 0 0 0 0 0 0 0
-7.1031 0.3231 -1.9178 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.1952 1.9655 -0.6801 O 0 0 0 0 0 0 0 0 0 0 0 0
-4.7724 0.0147 -0.9872 C 0 0 1 0 0 0 0 0 0 0 0 0
-5.0607 -0.8986 -2.0995 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.0191 -2.2432 -2.0466 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.3362 -3.0459 -3.2565 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.7053 -2.7881 -0.9474 O 0 0 0 0 0 0 0 0 0 0 0 0
-3.7668 0.8883 -1.4607 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.9823 1.5750 -0.6840 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.9705 1.5937 0.7205 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.7392 2.7929 1.3600 C 0 0 0 0 0 0 0 0 0 0 0 0
12.1173 -1.1650 -0.0829 H 0 0 0 0 0 0 0 0 0 0 0 0
11.1828 -1.8084 -1.4264 H 0 0 0 0 0 0 0 0 0 0 0 0
10.4072 -1.7400 0.2144 H 0 0 0 0 0 0 0 0 0 0 0 0
11.4405 0.9128 -0.4377 H 0 0 0 0 0 0 0 0 0 0 0 0
10.6318 0.2838 -1.9266 H 0 0 0 0 0 0 0 0 0 0 0 0
9.3550 1.7843 -0.4636 H 0 0 0 0 0 0 0 0 0 0 0 0
10.0937 0.2955 1.5217 H 0 0 0 0 0 0 0 0 0 0 0 0
8.2999 0.4071 -2.1116 H 0 0 0 0 0 0 0 0 0 0 0 0
8.8412 -1.8961 -1.5602 H 0 0 0 0 0 0 0 0 0 0 0 0
7.0980 -1.6620 -1.4757 H 0 0 0 0 0 0 0 0 0 0 0 0
8.0551 -1.7794 0.0491 H 0 0 0 0 0 0 0 0 0 0 0 0
6.7169 1.8523 -0.9515 H 0 0 0 0 0 0 0 0 0 0 0 0
5.7429 -1.0535 -0.1102 H 0 0 0 0 0 0 0 0 0 0 0 0
4.1353 0.8272 -1.4683 H 0 0 0 0 0 0 0 0 0 0 0 0
4.1912 1.5750 0.2150 H 0 0 0 0 0 0 0 0 0 0 0 0
2.4387 -2.0034 -0.9897 H 0 0 0 0 0 0 0 0 0 0 0 0
4.0304 -1.4497 -1.5251 H 0 0 0 0 0 0 0 0 0 0 0 0
3.9233 -2.4318 -0.0202 H 0 0 0 0 0 0 0 0 0 0 0 0
3.5012 -1.5587 1.7160 H 0 0 0 0 0 0 0 0 0 0 0 0
1.6443 0.9336 -0.6335 H 0 0 0 0 0 0 0 0 0 0 0 0
1.1752 -0.9268 1.6867 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.5691 1.0946 0.0892 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.1111 -0.6069 3.3145 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.7722 -1.2657 3.3727 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.5660 -1.9436 2.1552 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.2918 -0.4445 1.5701 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.0664 0.2792 1.7958 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.1087 -0.8917 3.2162 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.3337 -0.4798 3.3167 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.9692 1.3027 4.7276 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.0229 1.8222 1.3927 H 0 0 0 0 0 0 0 0 0 0 0 0
-8.4037 0.7733 1.7178 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.7757 -0.6565 0.1295 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1782 -0.9585 0.7395 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.2135 -0.7632 -2.0710 H 0 0 0 0 0 0 0 0 0 0 0 0
-8.0742 0.7357 -1.6234 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.7328 0.8690 -2.7987 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.1151 2.2648 -0.7212 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.5493 -0.7406 -0.2337 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.6428 -2.8324 -4.0956 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.3377 -4.1379 -2.9885 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.3638 -2.8385 -3.6408 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.6674 0.9789 -2.5881 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.2528 2.2118 -1.3099 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.9339 2.1612 0.9077 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.6089 3.6372 0.6733 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.3373 2.9931 2.3922 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.7882 2.6065 1.4885 H 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0
2 3 1 0
3 4 1 0
3 5 1 0
5 6 1 0
5 7 1 0
7 8 1 0
8 9 1 0
9 10 1 0
10 11 1 0
11 12 1 0
11 13 1 1
11 14 1 0
14 15 2 0
15 16 1 0
16 17 2 0
17 18 1 0
17 19 1 0
19 20 1 0
20 21 1 0
21 22 2 0
21 23 1 0
23 24 1 0
24 25 1 0
24 26 1 0
26 27 1 0
27 28 1 0
28 29 1 0
28 30 1 1
28 31 1 0
31 32 1 0
32 33 1 0
33 34 1 0
33 35 2 0
31 36 1 0
36 37 2 0
37 38 1 0
38 39 1 0
9 7 1 0
38 19 1 0
1 40 1 0
1 41 1 0
1 42 1 0
2 43 1 0
2 44 1 0
3 45 1 1
4 46 1 0
5 47 1 6
6 48 1 0
6 49 1 0
6 50 1 0
7 51 1 6
9 52 1 1
10 53 1 0
10 54 1 0
12 55 1 0
12 56 1 0
12 57 1 0
13 58 1 0
14 59 1 0
15 60 1 0
16 61 1 0
18 62 1 0
18 63 1 0
18 64 1 0
19 65 1 6
23 66 1 0
23 67 1 0
24 68 1 1
25 69 1 0
26 70 1 0
26 71 1 0
27 72 1 0
27 73 1 0
29 74 1 0
29 75 1 0
29 76 1 0
30 77 1 0
31 78 1 1
34 79 1 0
34 80 1 0
34 81 1 0
36 82 1 0
37 83 1 0
38 84 1 6
39 85 1 0
39 86 1 0
39 87 1 0
M END
3D SDF for NP0005325 (Pladienolide D)
Mrv1652307012118013D
87 88 0 0 0 0 999 V2000
11.0597 -1.2104 -0.4820 C 0 0 0 0 0 0 0 0 0 0 0 0
10.6689 0.1892 -0.8007 C 0 0 1 0 0 0 0 0 0 0 0 0
9.3382 0.6423 -0.2974 C 0 0 2 0 0 0 0 0 0 0 0 0
9.2314 0.5469 1.0980 O 0 0 0 0 0 0 0 0 0 0 0 0
8.1624 0.1235 -1.0298 C 0 0 1 0 0 0 0 0 0 0 0 0
8.0733 -1.3608 -0.9902 C 0 0 0 0 0 0 0 0 0 0 0 0
6.8694 0.7967 -0.6102 C 0 0 2 0 0 0 0 0 0 0 0 0
6.5133 0.6688 0.7668 O 0 0 0 0 0 0 0 0 0 0 0 0
5.6838 0.0420 -0.1827 C 0 0 1 0 0 0 0 0 0 0 0 0
4.3021 0.6438 -0.3886 C 0 0 2 0 0 0 0 0 0 0 0 0
3.2890 -0.3472 0.1408 C 0 0 1 0 0 0 0 0 0 0 0 0
3.4259 -1.6278 -0.6165 C 0 0 0 0 0 0 0 0 0 0 0 0
3.6781 -0.6155 1.4728 O 0 0 0 0 0 0 0 0 0 0 0 0
1.9044 0.1867 0.1103 C 0 0 0 0 0 0 0 0 0 0 0 0
0.9604 -0.1922 0.9376 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.4030 0.3632 0.8738 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.3354 -0.0314 1.7141 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.9266 -1.0618 2.7164 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.7338 0.4998 1.6605 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.0128 0.8956 3.0266 O 0 0 0 0 0 0 0 0 0 0 0 0
-4.3163 1.0029 3.5286 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.6262 1.7579 4.4786 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.3120 0.1668 2.8667 C 0 0 1 0 0 0 0 0 0 0 0 0
-6.7405 0.4064 2.9568 C 0 0 1 0 0 0 0 0 0 0 0 0
-7.0327 1.5252 3.7711 O 0 0 0 0 0 0 0 0 0 0 0 0
-7.2964 0.7441 1.5859 C 0 0 2 0 0 0 0 0 0 0 0 0
-6.8374 -0.0962 0.4614 C 0 0 2 0 0 0 0 0 0 0 0 0
-6.1715 0.5969 -0.7083 C 0 0 1 0 0 0 0 0 0 0 0 0
-7.1031 0.3231 -1.9178 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.1952 1.9655 -0.6801 O 0 0 0 0 0 0 0 0 0 0 0 0
-4.7724 0.0147 -0.9872 C 0 0 1 0 0 0 0 0 0 0 0 0
-5.0607 -0.8986 -2.0995 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.0191 -2.2432 -2.0466 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.3362 -3.0459 -3.2565 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.7053 -2.7881 -0.9474 O 0 0 0 0 0 0 0 0 0 0 0 0
-3.7668 0.8883 -1.4607 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.9823 1.5750 -0.6840 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.9705 1.5937 0.7205 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.7392 2.7929 1.3600 C 0 0 0 0 0 0 0 0 0 0 0 0
12.1173 -1.1650 -0.0829 H 0 0 0 0 0 0 0 0 0 0 0 0
11.1828 -1.8084 -1.4264 H 0 0 0 0 0 0 0 0 0 0 0 0
10.4072 -1.7400 0.2144 H 0 0 0 0 0 0 0 0 0 0 0 0
11.4405 0.9128 -0.4377 H 0 0 0 0 0 0 0 0 0 0 0 0
10.6318 0.2838 -1.9266 H 0 0 0 0 0 0 0 0 0 0 0 0
9.3550 1.7843 -0.4636 H 0 0 0 0 0 0 0 0 0 0 0 0
10.0937 0.2955 1.5217 H 0 0 0 0 0 0 0 0 0 0 0 0
8.2999 0.4071 -2.1116 H 0 0 0 0 0 0 0 0 0 0 0 0
8.8412 -1.8961 -1.5602 H 0 0 0 0 0 0 0 0 0 0 0 0
7.0980 -1.6620 -1.4757 H 0 0 0 0 0 0 0 0 0 0 0 0
8.0551 -1.7794 0.0491 H 0 0 0 0 0 0 0 0 0 0 0 0
6.7169 1.8523 -0.9515 H 0 0 0 0 0 0 0 0 0 0 0 0
5.7429 -1.0535 -0.1102 H 0 0 0 0 0 0 0 0 0 0 0 0
4.1353 0.8272 -1.4683 H 0 0 0 0 0 0 0 0 0 0 0 0
4.1912 1.5750 0.2150 H 0 0 0 0 0 0 0 0 0 0 0 0
2.4387 -2.0034 -0.9897 H 0 0 0 0 0 0 0 0 0 0 0 0
4.0304 -1.4497 -1.5251 H 0 0 0 0 0 0 0 0 0 0 0 0
3.9233 -2.4318 -0.0202 H 0 0 0 0 0 0 0 0 0 0 0 0
3.5012 -1.5587 1.7160 H 0 0 0 0 0 0 0 0 0 0 0 0
1.6443 0.9336 -0.6335 H 0 0 0 0 0 0 0 0 0 0 0 0
1.1752 -0.9268 1.6867 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.5691 1.0946 0.0892 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.1111 -0.6069 3.3145 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.7722 -1.2657 3.3727 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.5660 -1.9436 2.1552 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.2918 -0.4445 1.5701 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.0664 0.2792 1.7958 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.1087 -0.8917 3.2162 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.3337 -0.4798 3.3167 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.9692 1.3027 4.7276 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.0229 1.8222 1.3927 H 0 0 0 0 0 0 0 0 0 0 0 0
-8.4037 0.7733 1.7178 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.7757 -0.6565 0.1295 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1782 -0.9585 0.7395 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.2135 -0.7632 -2.0710 H 0 0 0 0 0 0 0 0 0 0 0 0
-8.0742 0.7357 -1.6234 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.7328 0.8690 -2.7987 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.1151 2.2648 -0.7212 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.5493 -0.7406 -0.2337 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.6428 -2.8324 -4.0956 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.3377 -4.1379 -2.9885 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.3638 -2.8385 -3.6408 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.6674 0.9789 -2.5881 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.2528 2.2118 -1.3099 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.9339 2.1612 0.9077 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.6089 3.6372 0.6733 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.3373 2.9931 2.3922 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.7882 2.6065 1.4885 H 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0 0 0 0
2 3 1 0 0 0 0
3 4 1 0 0 0 0
3 5 1 0 0 0 0
5 6 1 0 0 0 0
5 7 1 0 0 0 0
7 8 1 0 0 0 0
8 9 1 0 0 0 0
9 10 1 0 0 0 0
10 11 1 0 0 0 0
11 12 1 0 0 0 0
11 13 1 1 0 0 0
11 14 1 0 0 0 0
14 15 2 0 0 0 0
15 16 1 0 0 0 0
16 17 2 0 0 0 0
17 18 1 0 0 0 0
17 19 1 0 0 0 0
19 20 1 0 0 0 0
20 21 1 0 0 0 0
21 22 2 0 0 0 0
21 23 1 0 0 0 0
23 24 1 0 0 0 0
24 25 1 0 0 0 0
24 26 1 0 0 0 0
26 27 1 0 0 0 0
27 28 1 0 0 0 0
28 29 1 0 0 0 0
28 30 1 1 0 0 0
28 31 1 0 0 0 0
31 32 1 0 0 0 0
32 33 1 0 0 0 0
33 34 1 0 0 0 0
33 35 2 0 0 0 0
31 36 1 0 0 0 0
36 37 2 0 0 0 0
37 38 1 0 0 0 0
38 39 1 0 0 0 0
9 7 1 0 0 0 0
38 19 1 0 0 0 0
1 40 1 0 0 0 0
1 41 1 0 0 0 0
1 42 1 0 0 0 0
2 43 1 0 0 0 0
2 44 1 0 0 0 0
3 45 1 1 0 0 0
4 46 1 0 0 0 0
5 47 1 6 0 0 0
6 48 1 0 0 0 0
6 49 1 0 0 0 0
6 50 1 0 0 0 0
7 51 1 6 0 0 0
9 52 1 1 0 0 0
10 53 1 0 0 0 0
10 54 1 0 0 0 0
12 55 1 0 0 0 0
12 56 1 0 0 0 0
12 57 1 0 0 0 0
13 58 1 0 0 0 0
14 59 1 0 0 0 0
15 60 1 0 0 0 0
16 61 1 0 0 0 0
18 62 1 0 0 0 0
18 63 1 0 0 0 0
18 64 1 0 0 0 0
19 65 1 6 0 0 0
23 66 1 0 0 0 0
23 67 1 0 0 0 0
24 68 1 1 0 0 0
25 69 1 0 0 0 0
26 70 1 0 0 0 0
26 71 1 0 0 0 0
27 72 1 0 0 0 0
27 73 1 0 0 0 0
29 74 1 0 0 0 0
29 75 1 0 0 0 0
29 76 1 0 0 0 0
30 77 1 0 0 0 0
31 78 1 1 0 0 0
34 79 1 0 0 0 0
34 80 1 0 0 0 0
34 81 1 0 0 0 0
36 82 1 0 0 0 0
37 83 1 0 0 0 0
38 84 1 6 0 0 0
39 85 1 0 0 0 0
39 86 1 0 0 0 0
39 87 1 0 0 0 0
M END
> <DATABASE_ID>
NP0005325
> <DATABASE_NAME>
NP-MRD
> <SMILES>
[H]O[C@@]([H])(C([H])([H])C([H])([H])[H])[C@@]([H])(C([H])([H])[H])[C@]1([H])O[C@@]1([H])C([H])([H])[C@@](O[H])(C(\[H])=C(/[H])\C(\[H])=C(/C([H])([H])[H])[C@@]1([H])OC(=O)C([H])([H])[C@@]([H])(O[H])C([H])([H])C([H])([H])[C@](O[H])(C([H])([H])[H])[C@@]([H])(OC(=O)C([H])([H])[H])\C([H])=C([H])/[C@@]1([H])C([H])([H])[H])C([H])([H])[H]
> <INCHI_IDENTIFIER>
InChI=1S/C30H48O9/c1-8-23(33)20(4)28-24(38-28)17-29(6,35)14-9-10-18(2)27-19(3)11-12-25(37-21(5)31)30(7,36)15-13-22(32)16-26(34)39-27/h9-12,14,19-20,22-25,27-28,32-33,35-36H,8,13,15-17H2,1-7H3/b12-11-,14-9+,18-10+/t19-,20-,22+,23+,24+,25+,27-,28+,29+,30-/m1/s1
> <INCHI_KEY>
SDUSVHUQNWGNCQ-ASUCIOEZSA-N
> <FORMULA>
C30H48O9
> <MOLECULAR_WEIGHT>
552.705
> <EXACT_MASS>
552.329833126
> <JCHEM_ACCEPTOR_COUNT>
7
> <JCHEM_ATOM_COUNT>
87
> <JCHEM_AVERAGE_POLARIZABILITY>
62.11463892450587
> <JCHEM_BIOAVAILABILITY>
1
> <JCHEM_DONOR_COUNT>
4
> <JCHEM_FORMAL_CHARGE>
0
> <JCHEM_GHOSE_FILTER>
0
> <JCHEM_IUPAC>
(2S,4Z,6S,7R,10S)-7,10-dihydroxy-2-[(2E,4E,6R)-6-hydroxy-7-[(2S,3S)-3-[(2R,3S)-3-hydroxypentan-2-yl]oxiran-2-yl]-6-methylhepta-2,4-dien-2-yl]-3,7-dimethyl-12-oxo-1-oxacyclododec-4-en-6-yl acetate
> <ALOGPS_LOGP>
2.79
> <JCHEM_LOGP>
2.206833015999999
> <ALOGPS_LOGS>
-4.37
> <JCHEM_MDDR_LIKE_RULE>
0
> <JCHEM_NUMBER_OF_RINGS>
2
> <JCHEM_PHYSIOLOGICAL_CHARGE>
0
> <JCHEM_PKA>
14.416452019776528
> <JCHEM_PKA_STRONGEST_ACIDIC>
13.801660313606245
> <JCHEM_PKA_STRONGEST_BASIC>
-2.801081418830697
> <JCHEM_POLAR_SURFACE_AREA>
146.04999999999998
> <JCHEM_REFRACTIVITY>
149.27280000000002
> <JCHEM_ROTATABLE_BOND_COUNT>
10
> <JCHEM_RULE_OF_FIVE>
0
> <ALOGPS_SOLUBILITY>
2.36e-02 g/l
> <JCHEM_TRADITIONAL_IUPAC>
(2S,4Z,6S,7R,10S)-7,10-dihydroxy-2-[(2E,4E,6R)-6-hydroxy-7-[(2S,3S)-3-[(2R,3S)-3-hydroxypentan-2-yl]oxiran-2-yl]-6-methylhepta-2,4-dien-2-yl]-3,7-dimethyl-12-oxo-1-oxacyclododec-4-en-6-yl acetate
> <JCHEM_VEBER_RULE>
0
$$$$
3D-SDF for NP0005325 (Pladienolide D)
RDKit 3D
87 88 0 0 0 0 0 0 0 0999 V2000
11.0597 -1.2104 -0.4820 C 0 0 0 0 0 0 0 0 0 0 0 0
10.6689 0.1892 -0.8007 C 0 0 0 0 0 0 0 0 0 0 0 0
9.3382 0.6423 -0.2974 C 0 0 2 0 0 0 0 0 0 0 0 0
9.2314 0.5469 1.0980 O 0 0 0 0 0 0 0 0 0 0 0 0
8.1624 0.1235 -1.0298 C 0 0 1 0 0 0 0 0 0 0 0 0
8.0733 -1.3608 -0.9902 C 0 0 0 0 0 0 0 0 0 0 0 0
6.8694 0.7967 -0.6102 C 0 0 2 0 0 0 0 0 0 0 0 0
6.5133 0.6688 0.7668 O 0 0 0 0 0 0 0 0 0 0 0 0
5.6838 0.0420 -0.1827 C 0 0 1 0 0 0 0 0 0 0 0 0
4.3021 0.6438 -0.3886 C 0 0 0 0 0 0 0 0 0 0 0 0
3.2890 -0.3472 0.1408 C 0 0 1 0 0 0 0 0 0 0 0 0
3.4259 -1.6278 -0.6165 C 0 0 0 0 0 0 0 0 0 0 0 0
3.6781 -0.6155 1.4728 O 0 0 0 0 0 0 0 0 0 0 0 0
1.9044 0.1867 0.1103 C 0 0 0 0 0 0 0 0 0 0 0 0
0.9604 -0.1922 0.9376 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.4030 0.3632 0.8738 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.3354 -0.0314 1.7141 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.9266 -1.0618 2.7164 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.7338 0.4998 1.6605 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.0128 0.8956 3.0266 O 0 0 0 0 0 0 0 0 0 0 0 0
-4.3163 1.0029 3.5286 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.6262 1.7579 4.4786 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.3120 0.1668 2.8667 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.7405 0.4064 2.9568 C 0 0 1 0 0 0 0 0 0 0 0 0
-7.0327 1.5252 3.7711 O 0 0 0 0 0 0 0 0 0 0 0 0
-7.2964 0.7441 1.5859 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.8374 -0.0962 0.4614 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.1715 0.5969 -0.7083 C 0 0 1 0 0 0 0 0 0 0 0 0
-7.1031 0.3231 -1.9178 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.1952 1.9655 -0.6801 O 0 0 0 0 0 0 0 0 0 0 0 0
-4.7724 0.0147 -0.9872 C 0 0 1 0 0 0 0 0 0 0 0 0
-5.0607 -0.8986 -2.0995 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.0191 -2.2432 -2.0466 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.3362 -3.0459 -3.2565 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.7053 -2.7881 -0.9474 O 0 0 0 0 0 0 0 0 0 0 0 0
-3.7668 0.8883 -1.4607 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.9823 1.5750 -0.6840 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.9705 1.5937 0.7205 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.7392 2.7929 1.3600 C 0 0 0 0 0 0 0 0 0 0 0 0
12.1173 -1.1650 -0.0829 H 0 0 0 0 0 0 0 0 0 0 0 0
11.1828 -1.8084 -1.4264 H 0 0 0 0 0 0 0 0 0 0 0 0
10.4072 -1.7400 0.2144 H 0 0 0 0 0 0 0 0 0 0 0 0
11.4405 0.9128 -0.4377 H 0 0 0 0 0 0 0 0 0 0 0 0
10.6318 0.2838 -1.9266 H 0 0 0 0 0 0 0 0 0 0 0 0
9.3550 1.7843 -0.4636 H 0 0 0 0 0 0 0 0 0 0 0 0
10.0937 0.2955 1.5217 H 0 0 0 0 0 0 0 0 0 0 0 0
8.2999 0.4071 -2.1116 H 0 0 0 0 0 0 0 0 0 0 0 0
8.8412 -1.8961 -1.5602 H 0 0 0 0 0 0 0 0 0 0 0 0
7.0980 -1.6620 -1.4757 H 0 0 0 0 0 0 0 0 0 0 0 0
8.0551 -1.7794 0.0491 H 0 0 0 0 0 0 0 0 0 0 0 0
6.7169 1.8523 -0.9515 H 0 0 0 0 0 0 0 0 0 0 0 0
5.7429 -1.0535 -0.1102 H 0 0 0 0 0 0 0 0 0 0 0 0
4.1353 0.8272 -1.4683 H 0 0 0 0 0 0 0 0 0 0 0 0
4.1912 1.5750 0.2150 H 0 0 0 0 0 0 0 0 0 0 0 0
2.4387 -2.0034 -0.9897 H 0 0 0 0 0 0 0 0 0 0 0 0
4.0304 -1.4497 -1.5251 H 0 0 0 0 0 0 0 0 0 0 0 0
3.9233 -2.4318 -0.0202 H 0 0 0 0 0 0 0 0 0 0 0 0
3.5012 -1.5587 1.7160 H 0 0 0 0 0 0 0 0 0 0 0 0
1.6443 0.9336 -0.6335 H 0 0 0 0 0 0 0 0 0 0 0 0
1.1752 -0.9268 1.6867 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.5691 1.0946 0.0892 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.1111 -0.6069 3.3145 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.7722 -1.2657 3.3727 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.5660 -1.9436 2.1552 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.2918 -0.4445 1.5701 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.0664 0.2792 1.7958 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.1087 -0.8917 3.2162 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.3337 -0.4798 3.3167 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.9692 1.3027 4.7276 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.0229 1.8222 1.3927 H 0 0 0 0 0 0 0 0 0 0 0 0
-8.4037 0.7733 1.7178 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.7757 -0.6565 0.1295 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1782 -0.9585 0.7395 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.2135 -0.7632 -2.0710 H 0 0 0 0 0 0 0 0 0 0 0 0
-8.0742 0.7357 -1.6234 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.7328 0.8690 -2.7987 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.1151 2.2648 -0.7212 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.5493 -0.7406 -0.2337 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.6428 -2.8324 -4.0956 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.3377 -4.1379 -2.9885 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.3638 -2.8385 -3.6408 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.6674 0.9789 -2.5881 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.2528 2.2118 -1.3099 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.9339 2.1612 0.9077 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.6089 3.6372 0.6733 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.3373 2.9931 2.3922 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.7882 2.6065 1.4885 H 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0
2 3 1 0
3 4 1 0
3 5 1 0
5 6 1 0
5 7 1 0
7 8 1 0
8 9 1 0
9 10 1 0
10 11 1 0
11 12 1 0
11 13 1 1
11 14 1 0
14 15 2 0
15 16 1 0
16 17 2 0
17 18 1 0
17 19 1 0
19 20 1 0
20 21 1 0
21 22 2 0
21 23 1 0
23 24 1 0
24 25 1 0
24 26 1 0
26 27 1 0
27 28 1 0
28 29 1 0
28 30 1 1
28 31 1 0
31 32 1 0
32 33 1 0
33 34 1 0
33 35 2 0
31 36 1 0
36 37 2 0
37 38 1 0
38 39 1 0
9 7 1 0
38 19 1 0
1 40 1 0
1 41 1 0
1 42 1 0
2 43 1 0
2 44 1 0
3 45 1 1
4 46 1 0
5 47 1 6
6 48 1 0
6 49 1 0
6 50 1 0
7 51 1 6
9 52 1 1
10 53 1 0
10 54 1 0
12 55 1 0
12 56 1 0
12 57 1 0
13 58 1 0
14 59 1 0
15 60 1 0
16 61 1 0
18 62 1 0
18 63 1 0
18 64 1 0
19 65 1 6
23 66 1 0
23 67 1 0
24 68 1 1
25 69 1 0
26 70 1 0
26 71 1 0
27 72 1 0
27 73 1 0
29 74 1 0
29 75 1 0
29 76 1 0
30 77 1 0
31 78 1 1
34 79 1 0
34 80 1 0
34 81 1 0
36 82 1 0
37 83 1 0
38 84 1 6
39 85 1 0
39 86 1 0
39 87 1 0
M END
PDB for NP0005325 (Pladienolide D)HEADER PROTEIN 01-JUL-21 NONE TITLE NULL COMPND NULL SOURCE NULL KEYWDS NULL EXPDTA NULL AUTHOR Marvin REVDAT 1 01-JUL-21 0 HETATM 1 C UNK 0 11.060 -1.210 -0.482 0.00 0.00 C+0 HETATM 2 C UNK 0 10.669 0.189 -0.801 0.00 0.00 C+0 HETATM 3 C UNK 0 9.338 0.642 -0.297 0.00 0.00 C+0 HETATM 4 O UNK 0 9.231 0.547 1.098 0.00 0.00 O+0 HETATM 5 C UNK 0 8.162 0.124 -1.030 0.00 0.00 C+0 HETATM 6 C UNK 0 8.073 -1.361 -0.990 0.00 0.00 C+0 HETATM 7 C UNK 0 6.869 0.797 -0.610 0.00 0.00 C+0 HETATM 8 O UNK 0 6.513 0.669 0.767 0.00 0.00 O+0 HETATM 9 C UNK 0 5.684 0.042 -0.183 0.00 0.00 C+0 HETATM 10 C UNK 0 4.302 0.644 -0.389 0.00 0.00 C+0 HETATM 11 C UNK 0 3.289 -0.347 0.141 0.00 0.00 C+0 HETATM 12 C UNK 0 3.426 -1.628 -0.617 0.00 0.00 C+0 HETATM 13 O UNK 0 3.678 -0.616 1.473 0.00 0.00 O+0 HETATM 14 C UNK 0 1.904 0.187 0.110 0.00 0.00 C+0 HETATM 15 C UNK 0 0.960 -0.192 0.938 0.00 0.00 C+0 HETATM 16 C UNK 0 -0.403 0.363 0.874 0.00 0.00 C+0 HETATM 17 C UNK 0 -1.335 -0.031 1.714 0.00 0.00 C+0 HETATM 18 C UNK 0 -0.927 -1.062 2.716 0.00 0.00 C+0 HETATM 19 C UNK 0 -2.734 0.500 1.661 0.00 0.00 C+0 HETATM 20 O UNK 0 -3.013 0.896 3.027 0.00 0.00 O+0 HETATM 21 C UNK 0 -4.316 1.003 3.529 0.00 0.00 C+0 HETATM 22 O UNK 0 -4.626 1.758 4.479 0.00 0.00 O+0 HETATM 23 C UNK 0 -5.312 0.167 2.867 0.00 0.00 C+0 HETATM 24 C UNK 0 -6.740 0.406 2.957 0.00 0.00 C+0 HETATM 25 O UNK 0 -7.033 1.525 3.771 0.00 0.00 O+0 HETATM 26 C UNK 0 -7.296 0.744 1.586 0.00 0.00 C+0 HETATM 27 C UNK 0 -6.837 -0.096 0.461 0.00 0.00 C+0 HETATM 28 C UNK 0 -6.172 0.597 -0.708 0.00 0.00 C+0 HETATM 29 C UNK 0 -7.103 0.323 -1.918 0.00 0.00 C+0 HETATM 30 O UNK 0 -6.195 1.966 -0.680 0.00 0.00 O+0 HETATM 31 C UNK 0 -4.772 0.015 -0.987 0.00 0.00 C+0 HETATM 32 O UNK 0 -5.061 -0.899 -2.099 0.00 0.00 O+0 HETATM 33 C UNK 0 -5.019 -2.243 -2.047 0.00 0.00 C+0 HETATM 34 C UNK 0 -5.336 -3.046 -3.256 0.00 0.00 C+0 HETATM 35 O UNK 0 -4.705 -2.788 -0.947 0.00 0.00 O+0 HETATM 36 C UNK 0 -3.767 0.888 -1.461 0.00 0.00 C+0 HETATM 37 C UNK 0 -2.982 1.575 -0.684 0.00 0.00 C+0 HETATM 38 C UNK 0 -2.970 1.594 0.721 0.00 0.00 C+0 HETATM 39 C UNK 0 -3.739 2.793 1.360 0.00 0.00 C+0 HETATM 40 H UNK 0 12.117 -1.165 -0.083 0.00 0.00 H+0 HETATM 41 H UNK 0 11.183 -1.808 -1.426 0.00 0.00 H+0 HETATM 42 H UNK 0 10.407 -1.740 0.214 0.00 0.00 H+0 HETATM 43 H UNK 0 11.441 0.913 -0.438 0.00 0.00 H+0 HETATM 44 H UNK 0 10.632 0.284 -1.927 0.00 0.00 H+0 HETATM 45 H UNK 0 9.355 1.784 -0.464 0.00 0.00 H+0 HETATM 46 H UNK 0 10.094 0.296 1.522 0.00 0.00 H+0 HETATM 47 H UNK 0 8.300 0.407 -2.112 0.00 0.00 H+0 HETATM 48 H UNK 0 8.841 -1.896 -1.560 0.00 0.00 H+0 HETATM 49 H UNK 0 7.098 -1.662 -1.476 0.00 0.00 H+0 HETATM 50 H UNK 0 8.055 -1.779 0.049 0.00 0.00 H+0 HETATM 51 H UNK 0 6.717 1.852 -0.952 0.00 0.00 H+0 HETATM 52 H UNK 0 5.743 -1.054 -0.110 0.00 0.00 H+0 HETATM 53 H UNK 0 4.135 0.827 -1.468 0.00 0.00 H+0 HETATM 54 H UNK 0 4.191 1.575 0.215 0.00 0.00 H+0 HETATM 55 H UNK 0 2.439 -2.003 -0.990 0.00 0.00 H+0 HETATM 56 H UNK 0 4.030 -1.450 -1.525 0.00 0.00 H+0 HETATM 57 H UNK 0 3.923 -2.432 -0.020 0.00 0.00 H+0 HETATM 58 H UNK 0 3.501 -1.559 1.716 0.00 0.00 H+0 HETATM 59 H UNK 0 1.644 0.934 -0.634 0.00 0.00 H+0 HETATM 60 H UNK 0 1.175 -0.927 1.687 0.00 0.00 H+0 HETATM 61 H UNK 0 -0.569 1.095 0.089 0.00 0.00 H+0 HETATM 62 H UNK 0 -0.111 -0.607 3.314 0.00 0.00 H+0 HETATM 63 H UNK 0 -1.772 -1.266 3.373 0.00 0.00 H+0 HETATM 64 H UNK 0 -0.566 -1.944 2.155 0.00 0.00 H+0 HETATM 65 H UNK 0 -3.292 -0.445 1.570 0.00 0.00 H+0 HETATM 66 H UNK 0 -5.066 0.279 1.796 0.00 0.00 H+0 HETATM 67 H UNK 0 -5.109 -0.892 3.216 0.00 0.00 H+0 HETATM 68 H UNK 0 -7.334 -0.480 3.317 0.00 0.00 H+0 HETATM 69 H UNK 0 -6.969 1.303 4.728 0.00 0.00 H+0 HETATM 70 H UNK 0 -7.023 1.822 1.393 0.00 0.00 H+0 HETATM 71 H UNK 0 -8.404 0.773 1.718 0.00 0.00 H+0 HETATM 72 H UNK 0 -7.776 -0.657 0.130 0.00 0.00 H+0 HETATM 73 H UNK 0 -6.178 -0.959 0.740 0.00 0.00 H+0 HETATM 74 H UNK 0 -7.213 -0.763 -2.071 0.00 0.00 H+0 HETATM 75 H UNK 0 -8.074 0.736 -1.623 0.00 0.00 H+0 HETATM 76 H UNK 0 -6.733 0.869 -2.799 0.00 0.00 H+0 HETATM 77 H UNK 0 -7.115 2.265 -0.721 0.00 0.00 H+0 HETATM 78 H UNK 0 -4.549 -0.741 -0.234 0.00 0.00 H+0 HETATM 79 H UNK 0 -4.643 -2.832 -4.096 0.00 0.00 H+0 HETATM 80 H UNK 0 -5.338 -4.138 -2.989 0.00 0.00 H+0 HETATM 81 H UNK 0 -6.364 -2.838 -3.641 0.00 0.00 H+0 HETATM 82 H UNK 0 -3.667 0.979 -2.588 0.00 0.00 H+0 HETATM 83 H UNK 0 -2.253 2.212 -1.310 0.00 0.00 H+0 HETATM 84 H UNK 0 -1.934 2.161 0.908 0.00 0.00 H+0 HETATM 85 H UNK 0 -3.609 3.637 0.673 0.00 0.00 H+0 HETATM 86 H UNK 0 -3.337 2.993 2.392 0.00 0.00 H+0 HETATM 87 H UNK 0 -4.788 2.607 1.488 0.00 0.00 H+0 CONECT 1 2 40 41 42 CONECT 2 1 3 43 44 CONECT 3 2 4 5 45 CONECT 4 3 46 CONECT 5 3 6 7 47 CONECT 6 5 48 49 50 CONECT 7 5 8 9 51 CONECT 8 7 9 CONECT 9 8 10 7 52 CONECT 10 9 11 53 54 CONECT 11 10 12 13 14 CONECT 12 11 55 56 57 CONECT 13 11 58 CONECT 14 11 15 59 CONECT 15 14 16 60 CONECT 16 15 17 61 CONECT 17 16 18 19 CONECT 18 17 62 63 64 CONECT 19 17 20 38 65 CONECT 20 19 21 CONECT 21 20 22 23 CONECT 22 21 CONECT 23 21 24 66 67 CONECT 24 23 25 26 68 CONECT 25 24 69 CONECT 26 24 27 70 71 CONECT 27 26 28 72 73 CONECT 28 27 29 30 31 CONECT 29 28 74 75 76 CONECT 30 28 77 CONECT 31 28 32 36 78 CONECT 32 31 33 CONECT 33 32 34 35 CONECT 34 33 79 80 81 CONECT 35 33 CONECT 36 31 37 82 CONECT 37 36 38 83 CONECT 38 37 39 19 84 CONECT 39 38 85 86 87 CONECT 40 1 CONECT 41 1 CONECT 42 1 CONECT 43 2 CONECT 44 2 CONECT 45 3 CONECT 46 4 CONECT 47 5 CONECT 48 6 CONECT 49 6 CONECT 50 6 CONECT 51 7 CONECT 52 9 CONECT 53 10 CONECT 54 10 CONECT 55 12 CONECT 56 12 CONECT 57 12 CONECT 58 13 CONECT 59 14 CONECT 60 15 CONECT 61 16 CONECT 62 18 CONECT 63 18 CONECT 64 18 CONECT 65 19 CONECT 66 23 CONECT 67 23 CONECT 68 24 CONECT 69 25 CONECT 70 26 CONECT 71 26 CONECT 72 27 CONECT 73 27 CONECT 74 29 CONECT 75 29 CONECT 76 29 CONECT 77 30 CONECT 78 31 CONECT 79 34 CONECT 80 34 CONECT 81 34 CONECT 82 36 CONECT 83 37 CONECT 84 38 CONECT 85 39 CONECT 86 39 CONECT 87 39 MASTER 0 0 0 0 0 0 0 0 87 0 176 0 END SMILES for NP0005325 (Pladienolide D)[H]O[C@@]([H])(C([H])([H])C([H])([H])[H])[C@@]([H])(C([H])([H])[H])[C@]1([H])O[C@@]1([H])C([H])([H])[C@@](O[H])(C(\[H])=C(/[H])\C(\[H])=C(/C([H])([H])[H])[C@@]1([H])OC(=O)C([H])([H])[C@@]([H])(O[H])C([H])([H])C([H])([H])[C@](O[H])(C([H])([H])[H])[C@@]([H])(OC(=O)C([H])([H])[H])\C([H])=C([H])/[C@@]1([H])C([H])([H])[H])C([H])([H])[H] INCHI for NP0005325 (Pladienolide D)InChI=1S/C30H48O9/c1-8-23(33)20(4)28-24(38-28)17-29(6,35)14-9-10-18(2)27-19(3)11-12-25(37-21(5)31)30(7,36)15-13-22(32)16-26(34)39-27/h9-12,14,19-20,22-25,27-28,32-33,35-36H,8,13,15-17H2,1-7H3/b12-11-,14-9+,18-10+/t19-,20-,22+,23+,24+,25+,27-,28+,29+,30-/m1/s1 3D Structure for NP0005325 (Pladienolide D) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Synonyms |
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| Chemical Formula | C30H48O9 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Average Mass | 552.7050 Da | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Monoisotopic Mass | 552.32983 Da | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IUPAC Name | (2S,4Z,6S,7R,10S)-7,10-dihydroxy-2-[(2E,4E,6R)-6-hydroxy-7-[(2S,3S)-3-[(2R,3S)-3-hydroxypentan-2-yl]oxiran-2-yl]-6-methylhepta-2,4-dien-2-yl]-3,7-dimethyl-12-oxo-1-oxacyclododec-4-en-6-yl acetate | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Traditional Name | (2S,4Z,6S,7R,10S)-7,10-dihydroxy-2-[(2E,4E,6R)-6-hydroxy-7-[(2S,3S)-3-[(2R,3S)-3-hydroxypentan-2-yl]oxiran-2-yl]-6-methylhepta-2,4-dien-2-yl]-3,7-dimethyl-12-oxo-1-oxacyclododec-4-en-6-yl acetate | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| CAS Registry Number | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SMILES | CCC(O)C(C)C1OC1CC(C)(O)\C=C\C=C(/C)C1OC(=O)CC(O)CCC(C)(O)C(OC(C)=O)\C=C/C1C | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| InChI Identifier | InChI=1S/C30H48O9/c1-8-23(33)20(4)28-24(38-28)17-29(6,35)14-9-10-18(2)27-19(3)11-12-25(37-21(5)31)30(7,36)15-13-22(32)16-26(34)39-27/h9-12,14,19-20,22-25,27-28,32-33,35-36H,8,13,15-17H2,1-7H3/b12-11-,14-9+,18-10+ | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| InChI Key | SDUSVHUQNWGNCQ-ASUCIOEZSA-N | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Spectra | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Predicted Spectra | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Chemical Shift Submissions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species of Origin |
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| Chemical Taxonomy | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Classification | Not classified | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Physical Properties | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| State | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Properties |
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| Predicted Properties |
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| External Links | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| NPAtlas ID | NPA005120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HMDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| DrugBank ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Phenol Explorer Compound ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| FoodDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| KNApSAcK ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Chemspider ID | 11224074 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| KEGG Compound ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| BioCyc ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| BiGG ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Wikipedia Link | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| METLIN ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PubChem Compound | 22185989 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ChEBI ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Good Scents ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| References | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| General References | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
