NP-MRD: Showing NP-Card for Viridicatic acid (NP0004797)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

1.0

Created at

2020-12-09 02:12:30 UTC

Updated at

2021-07-15 16:50:11 UTC

NP-MRD ID

NP0004797

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Viridicatic acid

Provided By

NPAtlas

Description

2-(4-Hexanoyl-3-hydroxy-5-oxo-2,5-dihydrofuran-2-yl)acetic acid belongs to the class of organic compounds known as butenolides. These are dihydrofurans with a carbonyl group at the C2 carbon atom. Viridicatic acid is found in Penicillium and Penicillium aurantiogriseum. It was first documented in 1960 (PMID: 13800895). Based on a literature review very few articles have been published on 2-(4-hexanoyl-3-hydroxy-5-oxo-2,5-dihydrofuran-2-yl)acetic acid (PMID: 25137015) (PMID: 23400446) (PMID: 11526019).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242121113D          

 34 34  0  0  0  0            999 V2000
   -4.9980   -0.5334    1.8208 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5291    0.1976    0.5882 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.1651   -0.3887    0.2301 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.5862    0.2548   -0.9758 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.2596   -0.3503   -1.3405 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2039   -0.2573   -0.3491 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3892   -0.6806    0.8206 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1202    0.3178   -0.6194 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1316    0.4250    0.2477 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0561   -0.0084    1.5610 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2995    1.0493   -0.3747 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.5206    0.1929   -0.4389 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.0519   -0.2471    0.8596 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5962    0.0694    1.9899 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1740   -1.1042    0.9255 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8924    1.3387   -1.6898 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5756    0.8915   -1.8650 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9662    1.0139   -2.9717 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8451   -1.2185    1.6378 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1928   -1.1796    2.2669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3044    0.1854    2.6267 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5028    1.2847    0.6889 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2561   -0.0369   -0.2412 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3330   -1.4634    0.0236 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5297   -0.1982    1.1243 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4461    1.3528   -0.8716 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3092    0.1140   -1.8100 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9212   -0.0267   -2.3492 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4849   -1.4635   -1.4987 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9069   -1.0228    1.6833 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5324    2.0270    0.1216 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3405    0.7156   -0.9778 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2371   -0.7189   -1.0328 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8551   -0.9539    0.1895 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  6  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 11 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 17  8  1  0  0  0  0
  1 19  1  0  0  0  0
  1 20  1  0  0  0  0
  1 21  1  0  0  0  0
  2 22  1  0  0  0  0
  2 23  1  0  0  0  0
  3 24  1  0  0  0  0
  3 25  1  0  0  0  0
  4 26  1  0  0  0  0
  4 27  1  0  0  0  0
  5 28  1  0  0  0  0
  5 29  1  0  0  0  0
 10 30  1  0  0  0  0
 11 31  1  1  0  0  0
 12 32  1  0  0  0  0
 12 33  1  0  0  0  0
 15 34  1  0  0  0  0
M  END

     RDKit          3D

 34 34  0  0  0  0  0  0  0  0999 V2000
   -4.9980   -0.5334    1.8208 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5291    0.1976    0.5882 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1651   -0.3887    0.2301 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5862    0.2548   -0.9758 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2596   -0.3503   -1.3405 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2039   -0.2573   -0.3491 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3892   -0.6806    0.8206 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1202    0.3178   -0.6194 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1316    0.4250    0.2477 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0561   -0.0084    1.5610 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2995    1.0493   -0.3747 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.5206    0.1929   -0.4389 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0519   -0.2471    0.8596 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5962    0.0694    1.9899 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1740   -1.1042    0.9255 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8924    1.3387   -1.6898 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5756    0.8915   -1.8650 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9662    1.0139   -2.9717 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8451   -1.2185    1.6378 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1928   -1.1796    2.2669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3044    0.1854    2.6267 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5028    1.2847    0.6889 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2561   -0.0369   -0.2412 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3330   -1.4634    0.0236 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5297   -0.1982    1.1243 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4461    1.3528   -0.8716 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3092    0.1140   -1.8100 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9212   -0.0267   -2.3492 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4849   -1.4635   -1.4987 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9069   -1.0228    1.6833 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5324    2.0270    0.1216 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3405    0.7156   -0.9778 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2371   -0.7189   -1.0328 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8551   -0.9539    0.1895 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  6  8  1  0
  8  9  2  0
  9 10  1  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 13 15  1  0
 11 16  1  0
 16 17  1  0
 17 18  2  0
 17  8  1  0
  1 19  1  0
  1 20  1  0
  1 21  1  0
  2 22  1  0
  2 23  1  0
  3 24  1  0
  3 25  1  0
  4 26  1  0
  4 27  1  0
  5 28  1  0
  5 29  1  0
 10 30  1  0
 11 31  1  1
 12 32  1  0
 12 33  1  0
 15 34  1  0
M  END


  Mrv1652306242121113D          

 34 34  0  0  0  0            999 V2000
   -4.9980   -0.5334    1.8208 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5291    0.1976    0.5882 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.1651   -0.3887    0.2301 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.5862    0.2548   -0.9758 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.2596   -0.3503   -1.3405 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2039   -0.2573   -0.3491 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3892   -0.6806    0.8206 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1202    0.3178   -0.6194 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1316    0.4250    0.2477 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0561   -0.0084    1.5610 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2995    1.0493   -0.3747 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.5206    0.1929   -0.4389 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.0519   -0.2471    0.8596 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5962    0.0694    1.9899 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1740   -1.1042    0.9255 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8924    1.3387   -1.6898 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5756    0.8915   -1.8650 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9662    1.0139   -2.9717 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8451   -1.2185    1.6378 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1928   -1.1796    2.2669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3044    0.1854    2.6267 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5028    1.2847    0.6889 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2561   -0.0369   -0.2412 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3330   -1.4634    0.0236 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5297   -0.1982    1.1243 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4461    1.3528   -0.8716 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3092    0.1140   -1.8100 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9212   -0.0267   -2.3492 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4849   -1.4635   -1.4987 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9069   -1.0228    1.6833 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5324    2.0270    0.1216 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3405    0.7156   -0.9778 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2371   -0.7189   -1.0328 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8551   -0.9539    0.1895 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  6  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 11 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 17  8  1  0  0  0  0
  1 19  1  0  0  0  0
  1 20  1  0  0  0  0
  1 21  1  0  0  0  0
  2 22  1  0  0  0  0
  2 23  1  0  0  0  0
  3 24  1  0  0  0  0
  3 25  1  0  0  0  0
  4 26  1  0  0  0  0
  4 27  1  0  0  0  0
  5 28  1  0  0  0  0
  5 29  1  0  0  0  0
 10 30  1  0  0  0  0
 11 31  1  1  0  0  0
 12 32  1  0  0  0  0
 12 33  1  0  0  0  0
 15 34  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0004797

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC(=O)C([H])([H])[C@@]1([H])OC(=O)C(C(=O)C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H])=C1O[H]

> <INCHI_IDENTIFIER>
InChI=1S/C12H16O6/c1-2-3-4-5-7(13)10-11(16)8(6-9(14)15)18-12(10)17/h8,16H,2-6H2,1H3,(H,14,15)/t8-/m1/s1

> <INCHI_KEY>
YZMZGKYVOIAWJS-UHFFFAOYSA-N

> <FORMULA>
C12H16O6

> <MOLECULAR_WEIGHT>
256.254

> <EXACT_MASS>
256.094688235

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
34

> <JCHEM_AVERAGE_POLARIZABILITY>
25.644133695171014

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
2-[(2R)-4-hexanoyl-3-hydroxy-5-oxo-2,5-dihydrofuran-2-yl]acetic acid

> <ALOGPS_LOGP>
1.01

> <JCHEM_LOGP>
1.5916422573333335

> <ALOGPS_LOGS>
-2.08

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-2

> <JCHEM_PKA>
3.929939755705852

> <JCHEM_PKA_STRONGEST_ACIDIC>
0.6040522618200317

> <JCHEM_PKA_STRONGEST_BASIC>
-7.213574154196067

> <JCHEM_POLAR_SURFACE_AREA>
100.9

> <JCHEM_REFRACTIVITY>
61.64920000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
7

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.15e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
[(2R)-4-hexanoyl-3-hydroxy-5-oxo-2H-furan-2-yl]acetic acid

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 34 34  0  0  0  0  0  0  0  0999 V2000
   -4.9980   -0.5334    1.8208 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5291    0.1976    0.5882 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1651   -0.3887    0.2301 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5862    0.2548   -0.9758 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2596   -0.3503   -1.3405 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2039   -0.2573   -0.3491 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3892   -0.6806    0.8206 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1202    0.3178   -0.6194 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1316    0.4250    0.2477 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0561   -0.0084    1.5610 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2995    1.0493   -0.3747 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.5206    0.1929   -0.4389 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0519   -0.2471    0.8596 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5962    0.0694    1.9899 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1740   -1.1042    0.9255 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8924    1.3387   -1.6898 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5756    0.8915   -1.8650 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9662    1.0139   -2.9717 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8451   -1.2185    1.6378 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1928   -1.1796    2.2669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3044    0.1854    2.6267 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5028    1.2847    0.6889 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2561   -0.0369   -0.2412 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3330   -1.4634    0.0236 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5297   -0.1982    1.1243 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4461    1.3528   -0.8716 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3092    0.1140   -1.8100 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9212   -0.0267   -2.3492 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4849   -1.4635   -1.4987 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9069   -1.0228    1.6833 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5324    2.0270    0.1216 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3405    0.7156   -0.9778 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2371   -0.7189   -1.0328 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8551   -0.9539    0.1895 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  6  8  1  0
  8  9  2  0
  9 10  1  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 13 15  1  0
 11 16  1  0
 16 17  1  0
 17 18  2  0
 17  8  1  0
  1 19  1  0
  1 20  1  0
  1 21  1  0
  2 22  1  0
  2 23  1  0
  3 24  1  0
  3 25  1  0
  4 26  1  0
  4 27  1  0
  5 28  1  0
  5 29  1  0
 10 30  1  0
 11 31  1  1
 12 32  1  0
 12 33  1  0
 15 34  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0      -4.998  -0.533   1.821  0.00  0.00           C+0
HETATM    2  C   UNK     0      -4.529   0.198   0.588  0.00  0.00           C+0
HETATM    3  C   UNK     0      -3.165  -0.389   0.230  0.00  0.00           C+0
HETATM    4  C   UNK     0      -2.586   0.255  -0.976  0.00  0.00           C+0
HETATM    5  C   UNK     0      -1.260  -0.350  -1.341  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.204  -0.257  -0.349  0.00  0.00           C+0
HETATM    7  O   UNK     0      -0.389  -0.681   0.821  0.00  0.00           O+0
HETATM    8  C   UNK     0       1.120   0.318  -0.619  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.132   0.425   0.248  0.00  0.00           C+0
HETATM   10  O   UNK     0       2.056  -0.008   1.561  0.00  0.00           O+0
HETATM   11  C   UNK     0       3.300   1.049  -0.375  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.521   0.193  -0.439  0.00  0.00           C+0
HETATM   13  C   UNK     0       5.052  -0.247   0.860  0.00  0.00           C+0
HETATM   14  O   UNK     0       4.596   0.069   1.990  0.00  0.00           O+0
HETATM   15  O   UNK     0       6.174  -1.104   0.926  0.00  0.00           O+0
HETATM   16  O   UNK     0       2.892   1.339  -1.690  0.00  0.00           O+0
HETATM   17  C   UNK     0       1.576   0.892  -1.865  0.00  0.00           C+0
HETATM   18  O   UNK     0       0.966   1.014  -2.972  0.00  0.00           O+0
HETATM   19  H   UNK     0      -5.845  -1.218   1.638  0.00  0.00           H+0
HETATM   20  H   UNK     0      -4.193  -1.180   2.267  0.00  0.00           H+0
HETATM   21  H   UNK     0      -5.304   0.185   2.627  0.00  0.00           H+0
HETATM   22  H   UNK     0      -4.503   1.285   0.689  0.00  0.00           H+0
HETATM   23  H   UNK     0      -5.256  -0.037  -0.241  0.00  0.00           H+0
HETATM   24  H   UNK     0      -3.333  -1.463   0.024  0.00  0.00           H+0
HETATM   25  H   UNK     0      -2.530  -0.198   1.124  0.00  0.00           H+0
HETATM   26  H   UNK     0      -2.446   1.353  -0.872  0.00  0.00           H+0
HETATM   27  H   UNK     0      -3.309   0.114  -1.810  0.00  0.00           H+0
HETATM   28  H   UNK     0      -0.921  -0.027  -2.349  0.00  0.00           H+0
HETATM   29  H   UNK     0      -1.485  -1.464  -1.499  0.00  0.00           H+0
HETATM   30  H   UNK     0       1.907  -1.023   1.683  0.00  0.00           H+0
HETATM   31  H   UNK     0       3.532   2.027   0.122  0.00  0.00           H+0
HETATM   32  H   UNK     0       5.340   0.716  -0.978  0.00  0.00           H+0
HETATM   33  H   UNK     0       4.237  -0.719  -1.033  0.00  0.00           H+0
HETATM   34  H   UNK     0       6.855  -0.954   0.190  0.00  0.00           H+0
CONECT    1    2   19   20   21                                             
CONECT    2    1    3   22   23                                             
CONECT    3    2    4   24   25                                             
CONECT    4    3    5   26   27                                             
CONECT    5    4    6   28   29                                             
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9   17                                                  
CONECT    9    8   10   11                                                  
CONECT   10    9   30                                                       
CONECT   11    9   12   16   31                                             
CONECT   12   11   13   32   33                                             
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   34                                                       
CONECT   16   11   17                                                       
CONECT   17   16   18    8                                                  
CONECT   18   17                                                            
CONECT   19    1                                                            
CONECT   20    1                                                            
CONECT   21    1                                                            
CONECT   22    2                                                            
CONECT   23    2                                                            
CONECT   24    3                                                            
CONECT   25    3                                                            
CONECT   26    4                                                            
CONECT   27    4                                                            
CONECT   28    5                                                            
CONECT   29    5                                                            
CONECT   30   10                                                            
CONECT   31   11                                                            
CONECT   32   12                                                            
CONECT   33   12                                                            
CONECT   34   15                                                            
MASTER        0    0    0    0    0    0    0    0   34    0   68    0
END

RDKit          3D

34 34  0  0  0  0  0  0  0  0999 V2000
   -4.9980   -0.5334    1.8208 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5291    0.1976    0.5882 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1651   -0.3887    0.2301 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5862    0.2548   -0.9758 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2596   -0.3503   -1.3405 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2039   -0.2573   -0.3491 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3892   -0.6806    0.8206 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1202    0.3178   -0.6194 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1316    0.4250    0.2477 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0561   -0.0084    1.5610 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2995    1.0493   -0.3747 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.5206    0.1929   -0.4389 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0519   -0.2471    0.8596 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5962    0.0694    1.9899 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1740   -1.1042    0.9255 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8924    1.3387   -1.6898 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5756    0.8915   -1.8650 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9662    1.0139   -2.9717 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8451   -1.2185    1.6378 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1928   -1.1796    2.2669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3044    0.1854    2.6267 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5028    1.2847    0.6889 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2561   -0.0369   -0.2412 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3330   -1.4634    0.0236 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5297   -0.1982    1.1243 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4461    1.3528   -0.8716 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3092    0.1140   -1.8100 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9212   -0.0267   -2.3492 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4849   -1.4635   -1.4987 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9069   -1.0228    1.6833 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5324    2.0270    0.1216 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3405    0.7156   -0.9778 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2371   -0.7189   -1.0328 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8551   -0.9539    0.1895 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  6  8  1  0
  8  9  2  0
  9 10  1  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 13 15  1  0
 11 16  1  0
 16 17  1  0
 17 18  2  0
 17  8  1  0
  1 19  1  0
  1 20  1  0
  1 21  1  0
  2 22  1  0
  2 23  1  0
  3 24  1  0
  3 25  1  0
  4 26  1  0
  4 27  1  0
  5 28  1  0
  5 29  1  0
 10 30  1  0
 11 31  1  1
 12 32  1  0
 12 33  1  0
 15 34  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
2-(4-Hexanoyl-3-hydroxy-5-oxo-2,5-dihydrofuran-2-yl)acetate	Generator
Viridicatate	Generator

Chemical Formula

C₁₂H₁₆O₆

Average Mass

256.2540 Da

Monoisotopic Mass

256.09469 Da

IUPAC Name

2-[(2R)-4-hexanoyl-3-hydroxy-5-oxo-2,5-dihydrofuran-2-yl]acetic acid

Traditional Name

[(2R)-4-hexanoyl-3-hydroxy-5-oxo-2H-furan-2-yl]acetic acid

CAS Registry Number

Not Available

SMILES

CCCCCC(=O)C1=C(O)C(CC(O)=O)OC1=O

InChI Identifier

InChI=1S/C12H16O6/c1-2-3-4-5-7(13)10-11(16)8(6-9(14)15)18-12(10)17/h8,16H,2-6H2,1H3,(H,14,15)

InChI Key

YZMZGKYVOIAWJS-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Penicillium	NPAtlas	13800895
Penicillium aurantiogriseum	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as butenolides. These are dihydrofurans with a carbonyl group at the C2 carbon atom.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Dihydrofurans

Sub Class

Furanones

Direct Parent

Butenolides

Alternative Parents

Substituents

2-furanone
Dicarboxylic acid or derivatives
Enoate ester
Alpha,beta-unsaturated carboxylic ester
Vinylogous acid
Carboxylic acid ester
Ketone
Lactone
Enol
Carboxylic acid
Carboxylic acid derivative
Oxacycle
Carbonyl group
Organic oxygen compound
Organic oxide
Organooxygen compound
Hydrocarbon derivative
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.01	ALOGPS
logP	1.59	ChemAxon
logS	-2.1	ALOGPS
pKa (Strongest Acidic)	0.6	ChemAxon
pKa (Strongest Basic)	-7.2	ChemAxon
Physiological Charge	-2	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	100.9 Å²	ChemAxon
Rotatable Bond Count	7	ChemAxon
Refractivity	61.65 m³·mol⁻¹	ChemAxon
Polarizability	25.64 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA002248

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

64882632

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

54715093

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

BIRKINSHAW JH, SAMANT MS: Studies in the biochemistry of micro-organisms. 107. Metabolites of Penicillium viridicatum Westling: viridicatic acid (ethylcarlosic acid). Biochem J. 1960 Feb;74:369-73. doi: 10.1042/bj0740369. [PubMed:13800895 ]
Vida N, Pastyrikova T, Klepetarova B, Beier P: Synthesis of aliphatic sulfur pentafluorides by oxidation of SF(5)-containing anisole, phenols, and anilines. J Org Chem. 2014 Sep 19;79(18):8906-11. doi: 10.1021/jo501562z. Epub 2014 Aug 27. [PubMed:25137015 ]
Schluter R, Lippmann R, Hammer E, Gesell Salazar M, Schauer F: Novel insights into the fungal oxidation of monoaromatic and biarylic environmental pollutants by characterization of two new ring cleavage enzymes. Appl Microbiol Biotechnol. 2013 Jun;97(11):5043-53. doi: 10.1007/s00253-013-4742-z. Epub 2013 Feb 12. [PubMed:23400446 ]
Sietmann R, Hammer E, Specht M, Cerniglia CE, Schauer F: Novel ring cleavage products in the biotransformation of biphenyl by the yeast Trichosporon mucoides. Appl Environ Microbiol. 2001 Sep;67(9):4158-65. doi: 10.1128/AEM.67.9.4158-4165.2001. [PubMed:11526019 ]

Showing NP-Card for Viridicatic acid (NP0004797)

MOL for NP0004797 (Viridicatic acid)

3D MOL for NP0004797 (Viridicatic acid)

3D SDF for NP0004797 (Viridicatic acid)

3D-SDF for NP0004797 (Viridicatic acid)

PDB for NP0004797 (Viridicatic acid)

3D PDB for NP0004797 (Viridicatic acid)

SMILES for NP0004797 (Viridicatic acid)

INCHI for NP0004797 (Viridicatic acid)

Structure for NP0004797 (Viridicatic acid)

3D Structure for NP0004797 (Viridicatic acid)