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Record Information
Version2.0
Created at2020-12-09 02:09:27 UTC
Updated at2021-07-15 16:50:00 UTC
NP-MRD IDNP0004739
Secondary Accession NumbersNone
Natural Product Identification
Common NameMicroviridin J
Provided ByNPAtlasNPAtlas Logo
Description Microviridin J is found in Microcystis. Microviridin J was first documented in 2003 (PMID: 12956505). Based on a literature review very few articles have been published on (2S)-2-({[(1S,4S,10S,13S,19R,22S,29R,30R,44S)-33-(3-carbamimidamidopropyl)-30-{[(2S)-1,3-dihydroxy-2-({1-hydroxy-2-[(1-hydroxyethylidene)amino]-3-methylpentylidene}amino)propylidene]amino}-2,11,21,24,31,34,41,46,48-nonahydroxy-4-[(4-hydroxyphenyl)methyl]-22-[(1H-indol-3-yl)methyl]-29-methyl-5,16,27-trioxo-15,28-dioxa-3,6,12,20,23,32,35,40,45,47-decaazatetracyclo[17.16.11.2¹³,²⁵.0⁶,¹⁰]Octatetraconta-2,11,20,23,31,34,40,45,47-nonaen-44-yl](hydroxy)methylidene}amino)-3-(1H-indol-2-yl)propanoic acid.
Structure
Thumb
Synonyms
ValueSource
(2S)-2-({[(1S,4S,10S,13S,19R,22S,29R,30R,44S)-33-(3-carbamimidamidopropyl)-30-{[(2S)-1,3-dihydroxy-2-({1-hydroxy-2-[(1-hydroxyethylidene)amino]-3-methylpentylidene}amino)propylidene]amino}-2,11,21,24,31,34,41,46,48-nonahydroxy-4-[(4-hydroxyphenyl)methyl]-22-[(1H-indol-3-yl)methyl]-29-methyl-5,16,27-trioxo-15,28-dioxa-3,6,12,20,23,32,35,40,45,47-decaazatetracyclo[17.16.11.2,.0,]octatetraconta-2,11,20,23,31,34,40,45,47-nonaen-44-yl](hydroxy)methylidene}amino)-3-(1H-indol-2-yl)propanoateGenerator
Chemical FormulaC80H105N19O22
Average Mass1684.8310 Da
Monoisotopic Mass1683.76816 Da
IUPAC Name(2S)-2-{[(4S,10S,13S,19R,22S,25R,29R,30R,33R,44S)-33-(3-carbamimidamidopropyl)-30-[(2S)-2-[(2R,3R)-2-acetamido-3-methylpentanamido]-3-hydroxypropanamido]-4-[(4-hydroxyphenyl)methyl]-22-[(1H-indol-3-yl)methyl]-29-methyl-2,5,11,16,21,24,27,31,34,41,46,48-dodecaoxo-15,28-dioxa-3,6,12,20,23,32,35,40,45,47-decaazatetracyclo[17.16.11.2^{13,25}.0^{6,10}]octatetracontan-44-yl]formamido}-3-(1H-indol-2-yl)propanoic acid
Traditional Name(2S)-2-{[(4S,10S,13S,19R,22S,25R,29R,30R,33R,44S)-33-(3-carbamimidamidopropyl)-30-[(2S)-2-[(2R,3R)-2-acetamido-3-methylpentanamido]-3-hydroxypropanamido]-4-[(4-hydroxyphenyl)methyl]-22-(1H-indol-3-ylmethyl)-29-methyl-2,5,11,16,21,24,27,31,34,41,46,48-dodecaoxo-15,28-dioxa-3,6,12,20,23,32,35,40,45,47-decaazatetracyclo[17.16.11.2^{13,25}.0^{6,10}]octatetracontan-44-yl]formamido}-3-(1H-indol-2-yl)propanoic acid
CAS Registry NumberNot Available
SMILES
CCC(C)C(NC(C)=O)C(=O)N[C@@H](CO)C(=O)N[C@@H]1[C@@H](C)OC(=O)CC2NC(=O)[C@@H]3COC(=O)CC[C@@H](NC(=O)[C@H](CC4=CNC5=CC=CC=C45)NC2=O)C(=O)N[C@@H](CCC(=O)NCCCC[C@H](NC(=O)C(CCCNC(N)=N)NC1=O)C(=O)N[C@@H](CC1=CC=C(O)C=C1)C(=O)N1CCC[C@H]1C(=O)N3)C(=O)N[C@@H](CC1=CC2=CC=CC=C2N1)C(O)=O
InChI Identifier
InChI=1S/C80H105N19O22/c1-5-40(2)65(86-42(4)101)76(115)96-59(38-100)73(112)98-66-41(3)121-64(105)36-56-72(111)92-55(34-45-37-85-50-17-9-7-15-48(45)50)71(110)90-54-26-28-63(104)120-39-60(74(113)93-56)97-75(114)61-20-13-31-99(61)78(117)57(32-43-21-23-47(102)24-22-43)94-68(107)51(88-67(106)52(91-77(66)116)19-12-30-84-80(81)82)18-10-11-29-83-62(103)27-25-53(89-69(54)108)70(109)95-58(79(118)119)35-46-33-44-14-6-8-16-49(44)87-46/h6-9,14-17,21-24,33,37,40-41,51-61,65-66,85,87,100,102H,5,10-13,18-20,25-32,34-36,38-39H2,1-4H3,(H,83,103)(H,86,101)(H,88,106)(H,89,108)(H,90,110)(H,91,116)(H,92,111)(H,93,113)(H,94,107)(H,95,109)(H,96,115)(H,97,114)(H,98,112)(H,118,119)(H4,81,82,84)/t40?,41-,51+,52?,53+,54-,55+,56?,57+,58+,59+,60+,61+,65?,66-/m1/s1
InChI KeyUJWZCJCSZSBGRS-DCVOKETJSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
MicrocystisNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.3ALOGPS
logP-6.4ChemAxon
logS-4.1ALOGPS
pKa (Strongest Acidic)3.41ChemAxon
pKa (Strongest Basic)12.16ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count23ChemAxon
Hydrogen Donor Count21ChemAxon
Polar Surface Area622.45 ŲChemAxon
Rotatable Bond Count21ChemAxon
Refractivity434.01 m³·mol⁻¹ChemAxon
Polarizability175.78 ųChemAxon
Number of Rings9ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA024658
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound145720570
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Rohrlack T, Christoffersen K, Hansen PE, Zhang W, Czarnecki O, Henning M, Fastner J, Erhard M, Neilan BA, Kaebernick M: Isolation, characterization, and quantitative analysis of Microviridin J, a new Microcystis metabolite toxic to Daphnia. J Chem Ecol. 2003 Aug;29(8):1757-70. doi: 10.1023/a:1024889925732. [PubMed:12956505 ]