Np mrd loader

Showing NP-Card for Halovir D (NP0004732)

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Record Information
Version2.0
Created at2020-12-09 02:09:12 UTC
Updated at2021-07-15 16:49:59 UTC
NP-MRD IDNP0004732
Secondary Accession NumbersNone
Natural Product Identification
Common NameHalovir D
Provided ByNPAtlasNPAtlas Logo
Description Halovir D is found in Scytalidium sp. Based on a literature review very few articles have been published on 2-{[(2S)-1-hydroxy-2-{[1-hydroxy-2-({hydroxy[(2S,4S)-4-hydroxy-1-{2-[(1-hydroxydodecylidene)amino]-2-methylpropanoyl}pyrrolidin-2-yl]methylidene}amino)-4-methylpentylidene]amino}-3-methylbutylidene]amino}-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]pentanediimidic acid.
Structure
Thumb
MOL3D MOLSDF3D SDFPDBSMILESInChI

MOL for NP0004732 (Halovir D)


  Mrv1652307012117543D          

138138  0  0  0  0            999 V2000
   16.4910   -0.1346    0.5553 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.2048   -0.8164    0.9724 C   0  0  1  0  0  0  0  0  0  0  0  0
   14.2811   -1.0970   -0.2014 C   0  0  1  0  0  0  0  0  0  0  0  0
   13.7882    0.0753   -0.9337 C   0  0  1  0  0  0  0  0  0  0  0  0
   12.8042    0.9483   -0.1868 C   0  0  1  0  0  0  0  0  0  0  0  0
   11.5507    0.1933    0.1547 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.8762   -0.4027   -1.0625 C   0  0  1  0  0  0  0  0  0  0  0  0
   10.3847    0.6126   -2.0800 C   0  0  2  0  0  0  0  0  0  0  0  0
    9.3308    1.5241   -1.4259 C   0  0  1  0  0  0  0  0  0  0  0  0
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    7.4155   -0.0973   -1.9320 C   0  0  1  0  0  0  0  0  0  0  0  0
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    4.5036   -1.6863   -0.0322 C   0  0  2  0  0  0  0  0  0  0  0  0
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 58135  1  0  0  0  0
 59136  1  0  0  0  0
 59137  1  0  0  0  0
 59138  1  0  0  0  0
M  END
Download

3D MOL for NP0004732 (Halovir D)

     RDKit          3D

138138  0  0  0  0  0  0  0  0999 V2000
   16.4910   -0.1346    0.5553 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END
Download

3D SDF for NP0004732 (Halovir D)


  Mrv1652307012117543D          

138138  0  0  0  0            999 V2000
   16.4910   -0.1346    0.5553 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END
> <DATABASE_ID>
NP0004732

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC([H])([H])[C@@]([H])(N([H])C(=O)[C@]([H])(N([H])C(=O)[C@@]([H])(N([H])C(=O)[C@@]([H])(N([H])C(=O)[C@@]1([H])N(C(=O)C(N([H])C(=O)C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])[C@@]([H])(O[H])C1([H])[H])C([H])([H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])C([H])([H])C(=O)N([H])[H])C([H])([H])C([H])(C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C43H79N7O9/c1-10-11-12-13-14-15-16-17-18-19-36(54)49-43(8,9)42(59)50-25-31(52)24-34(50)40(57)47-33(23-28(4)5)39(56)48-37(29(6)7)41(58)46-32(20-21-35(44)53)38(55)45-30(26-51)22-27(2)3/h27-34,37,51-52H,10-26H2,1-9H3,(H2,44,53)(H,45,55)(H,46,58)(H,47,57)(H,48,56)(H,49,54)/t30-,31-,32+,33-,34-,37-/m0/s1

> <INCHI_KEY>
XLHSKXDZYNSELH-NUNUOSAZSA-N

> <FORMULA>
C43H79N7O9

> <MOLECULAR_WEIGHT>
838.145

> <EXACT_MASS>
837.593927152

> <JCHEM_ACCEPTOR_COUNT>
9

> <JCHEM_ATOM_COUNT>
138

> <JCHEM_AVERAGE_POLARIZABILITY>
96.21640314308101

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
8

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2R)-2-[(2S)-2-[(2S)-2-{[(2S,4S)-1-(2-dodecanamido-2-methylpropanoyl)-4-hydroxypyrrolidin-2-yl]formamido}-4-methylpentanamido]-3-methylbutanamido]-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]pentanediamide

> <ALOGPS_LOGP>
3.60

> <JCHEM_LOGP>
2.732275661666667

> <ALOGPS_LOGS>
-4.92

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.325033404839413

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.867440504672727

> <JCHEM_PKA_STRONGEST_BASIC>
-2.7537858526249446

> <JCHEM_POLAR_SURFACE_AREA>
249.35999999999999

> <JCHEM_REFRACTIVITY>
225.27230000000014

> <JCHEM_ROTATABLE_BOND_COUNT>
29

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
9.99e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2R)-2-[(2S)-2-[(2S)-2-{[(2S,4S)-1-(2-dodecanamido-2-methylpropanoyl)-4-hydroxypyrrolidin-2-yl]formamido}-4-methylpentanamido]-3-methylbutanamido]-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]pentanediamide

> <JCHEM_VEBER_RULE>
0

$$$$
Download

3D-SDF for NP0004732 (Halovir D)

     RDKit          3D

138138  0  0  0  0  0  0  0  0999 V2000
   16.4910   -0.1346    0.5553 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.2048   -0.8164    0.9724 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2811   -1.0970   -0.2014 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.7882    0.0753   -0.9337 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8042    0.9483   -0.1868 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.5507    0.1933    0.1547 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.8762   -0.4027   -1.0625 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3847    0.6126   -2.0800 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3308    1.5241   -1.4259 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2384    0.6627   -0.9095 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4155   -0.0973   -1.9320 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5947   -1.0903   -1.0836 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1005   -2.0760   -0.5774 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2233   -0.8021   -0.8912 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.5036   -1.6863   -0.0322 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.1601   -2.2142    1.1389 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0777   -2.8733   -0.9265 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1628   -0.9983    0.3255 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3023   -1.0913   -0.5634 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0896   -0.3603    1.5667 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.1962    0.0897    2.4228 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7840    1.6167    2.4040 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.3207    2.1984    1.2583 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2617    1.6113    2.2905 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9332    0.1143    2.3284 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.6854   -0.3270    1.7846 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7022   -1.4800    1.2280 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5300    0.3819    1.7941 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7503    0.1067    1.2280 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.7708   -0.9458    0.1262 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0077   -0.5573   -1.0941 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1071   -1.7487   -2.0541 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6006    0.6043   -1.8698 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0350    0.0468    1.9485 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2410   -0.0655    3.1391 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1740    0.1701    1.0520 N   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5465    0.2107    1.0861 C   0  0  2  0  0  0  0  0  0  0  0  0
   -6.0283    1.6393    1.0891 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5105    2.2710    2.0941 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8649    2.1514    0.1617 N   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7472    2.6982   -0.8134 C   0  0  2  0  0  0  0  0  0  0  0  0
   -8.7826    3.6905   -0.1460 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6378    2.9242    0.8059 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.5674    3.7967    1.5555 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.8484    3.2809    1.9599 N   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3162    4.9577    1.8677 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5008    1.6592   -1.4613 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2126    0.4897   -0.7049 O   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3724    1.2568   -2.4370 N   0  0  0  0  0  0  0  0  0  0  0  0
   -9.7589   -0.2134   -2.3799 C   0  0  2  0  0  0  0  0  0  0  0  0
   -9.5620   -0.8690   -3.6725 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.8354   -2.2290   -3.6811 O   0  0  0  0  0  0  0  0  0  0  0  0
  -11.1384   -0.2855   -1.7706 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.5460   -1.6779   -1.4802 C   0  0  2  0  0  0  0  0  0  0  0  0
  -12.9267   -1.6574   -0.8900 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.6211   -2.1303   -0.3023 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1315   -0.5671    2.2459 C   0  0  1  0  0  0  0  0  0  0  0  0
   -7.6484   -0.4338    2.3538 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9677   -2.0879    1.8745 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.2898   -0.5488    1.2079 H   0  0  0  0  0  0  0  0  0  0  0  0
   16.7115   -0.4449   -0.4745 H   0  0  0  0  0  0  0  0  0  0  0  0
   16.4835    0.9352    0.6985 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.4957   -1.8233    1.3789 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.7089   -0.2506    1.7673 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.7813   -1.7745   -0.9220 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.3983   -1.6740    0.2316 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.6847    0.7623   -1.1001 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.4621   -0.1754   -1.9452 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.2583    1.2010    0.7843 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.5803    1.8643   -0.7149 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.8567    0.9153    0.6683 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.8002   -0.6413    0.8349 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.5784   -1.0609   -1.5811 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.0251   -1.0490   -0.6989 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.0112    0.1263   -2.9649 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.2454    1.2619   -2.3186 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.8294    2.0613   -0.6141 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.9362    2.2429   -2.1421 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.4529   -0.0146   -0.0730 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4733    1.4304   -0.4468 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6760    0.5973   -2.3595 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.9454   -0.5700   -2.7221 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7729   -0.0065   -1.3386 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4593   -2.3785    2.0083 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0637   -1.7250    1.5118 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5840   -3.2824    0.9082 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1980   -3.3781   -0.5472 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8257   -2.3930   -1.8895 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9117   -3.5702   -1.1058 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0728   -0.3352    3.3997 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1628    0.1246    1.9370 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0727    2.1213    3.3257 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6525    2.3156    0.5153 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8182    2.1642    3.1529 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9111    2.0188    1.3279 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1457   -0.2215    3.3964 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4696    1.3160    2.3787 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9535    1.0940    0.5025 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7953   -1.2549   -0.1047 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2860   -1.8730    0.5753 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0126   -0.2396   -0.8881 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9555   -2.6377   -1.4196 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4387   -1.6414   -2.8934 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1727   -1.7380   -2.4799 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6908    0.5977   -1.9413 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.1821    1.5441   -1.4580 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8177    0.2937   -0.0255 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9397   -0.3681    0.1751 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -7.2143    3.3809   -1.4679 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END
Download

PDB for NP0004732 (Halovir D)

HEADER    PROTEIN                                 01-JUL-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   01-JUL-21         0                                  
HETATM    1  C   UNK     0      16.491  -0.135   0.555  0.00  0.00           C+0
HETATM    2  C   UNK     0      15.205  -0.816   0.972  0.00  0.00           C+0
HETATM    3  C   UNK     0      14.281  -1.097  -0.201  0.00  0.00           C+0
HETATM    4  C   UNK     0      13.788   0.075  -0.934  0.00  0.00           C+0
HETATM    5  C   UNK     0      12.804   0.948  -0.187  0.00  0.00           C+0
HETATM    6  C   UNK     0      11.551   0.193   0.155  0.00  0.00           C+0
HETATM    7  C   UNK     0      10.876  -0.403  -1.063  0.00  0.00           C+0
HETATM    8  C   UNK     0      10.385   0.613  -2.080  0.00  0.00           C+0
HETATM    9  C   UNK     0       9.331   1.524  -1.426  0.00  0.00           C+0
HETATM   10  C   UNK     0       8.238   0.663  -0.910  0.00  0.00           C+0
HETATM   11  C   UNK     0       7.415  -0.097  -1.932  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.595  -1.090  -1.084  0.00  0.00           C+0
HETATM   13  O   UNK     0       7.101  -2.076  -0.577  0.00  0.00           O+0
HETATM   14  N   UNK     0       5.223  -0.802  -0.891  0.00  0.00           N+0
HETATM   15  C   UNK     0       4.504  -1.686  -0.032  0.00  0.00           C+0
HETATM   16  C   UNK     0       5.160  -2.214   1.139  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.078  -2.873  -0.927  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.163  -0.998   0.326  0.00  0.00           C+0
HETATM   19  O   UNK     0       2.302  -1.091  -0.563  0.00  0.00           O+0
HETATM   20  N   UNK     0       3.090  -0.360   1.567  0.00  0.00           N+0
HETATM   21  C   UNK     0       4.196   0.090   2.423  0.00  0.00           C+0
HETATM   22  C   UNK     0       3.784   1.617   2.404  0.00  0.00           C+0
HETATM   23  O   UNK     0       4.321   2.198   1.258  0.00  0.00           O+0
HETATM   24  C   UNK     0       2.262   1.611   2.291  0.00  0.00           C+0
HETATM   25  C   UNK     0       1.933   0.114   2.328  0.00  0.00           C+0
HETATM   26  C   UNK     0       0.685  -0.327   1.785  0.00  0.00           C+0
HETATM   27  O   UNK     0       0.702  -1.480   1.228  0.00  0.00           O+0
HETATM   28  N   UNK     0      -0.530   0.382   1.794  0.00  0.00           N+0
HETATM   29  C   UNK     0      -1.750   0.107   1.228  0.00  0.00           C+0
HETATM   30  C   UNK     0      -1.771  -0.946   0.126  0.00  0.00           C+0
HETATM   31  C   UNK     0      -1.008  -0.557  -1.094  0.00  0.00           C+0
HETATM   32  C   UNK     0      -1.107  -1.749  -2.054  0.00  0.00           C+0
HETATM   33  C   UNK     0      -1.601   0.604  -1.870  0.00  0.00           C+0
HETATM   34  C   UNK     0      -3.035   0.047   1.948  0.00  0.00           C+0
HETATM   35  O   UNK     0      -3.241  -0.066   3.139  0.00  0.00           O+0
HETATM   36  N   UNK     0      -4.174   0.170   1.052  0.00  0.00           N+0
HETATM   37  C   UNK     0      -5.547   0.211   1.086  0.00  0.00           C+0
HETATM   38  C   UNK     0      -6.028   1.639   1.089  0.00  0.00           C+0
HETATM   39  O   UNK     0      -5.511   2.271   2.094  0.00  0.00           O+0
HETATM   40  N   UNK     0      -6.865   2.151   0.162  0.00  0.00           N+0
HETATM   41  C   UNK     0      -7.747   2.698  -0.813  0.00  0.00           C+0
HETATM   42  C   UNK     0      -8.783   3.691  -0.146  0.00  0.00           C+0
HETATM   43  C   UNK     0      -9.638   2.924   0.806  0.00  0.00           C+0
HETATM   44  C   UNK     0     -10.567   3.797   1.556  0.00  0.00           C+0
HETATM   45  N   UNK     0     -11.848   3.281   1.960  0.00  0.00           N+0
HETATM   46  O   UNK     0     -10.316   4.958   1.868  0.00  0.00           O+0
HETATM   47  C   UNK     0      -8.501   1.659  -1.461  0.00  0.00           C+0
HETATM   48  O   UNK     0      -8.213   0.490  -0.705  0.00  0.00           O+0
HETATM   49  N   UNK     0      -9.372   1.257  -2.437  0.00  0.00           N+0
HETATM   50  C   UNK     0      -9.759  -0.213  -2.380  0.00  0.00           C+0
HETATM   51  C   UNK     0      -9.562  -0.869  -3.672  0.00  0.00           C+0
HETATM   52  O   UNK     0      -9.835  -2.229  -3.681  0.00  0.00           O+0
HETATM   53  C   UNK     0     -11.138  -0.286  -1.771  0.00  0.00           C+0
HETATM   54  C   UNK     0     -11.546  -1.678  -1.480  0.00  0.00           C+0
HETATM   55  C   UNK     0     -12.927  -1.657  -0.890  0.00  0.00           C+0
HETATM   56  C   UNK     0     -10.621  -2.130  -0.302  0.00  0.00           C+0
HETATM   57  C   UNK     0      -6.131  -0.567   2.246  0.00  0.00           C+0
HETATM   58  C   UNK     0      -7.648  -0.434   2.354  0.00  0.00           C+0
HETATM   59  C   UNK     0      -5.968  -2.088   1.875  0.00  0.00           C+0
HETATM   60  H   UNK     0      17.290  -0.549   1.208  0.00  0.00           H+0
HETATM   61  H   UNK     0      16.712  -0.445  -0.475  0.00  0.00           H+0
HETATM   62  H   UNK     0      16.483   0.935   0.699  0.00  0.00           H+0
HETATM   63  H   UNK     0      15.496  -1.823   1.379  0.00  0.00           H+0
HETATM   64  H   UNK     0      14.709  -0.251   1.767  0.00  0.00           H+0
HETATM   65  H   UNK     0      14.781  -1.775  -0.922  0.00  0.00           H+0
HETATM   66  H   UNK     0      13.398  -1.674   0.232  0.00  0.00           H+0
HETATM   67  H   UNK     0      14.685   0.762  -1.100  0.00  0.00           H+0
HETATM   68  H   UNK     0      13.462  -0.175  -1.945  0.00  0.00           H+0
HETATM   69  H   UNK     0      13.258   1.201   0.784  0.00  0.00           H+0
HETATM   70  H   UNK     0      12.580   1.864  -0.715  0.00  0.00           H+0
HETATM   71  H   UNK     0      10.857   0.915   0.668  0.00  0.00           H+0
HETATM   72  H   UNK     0      11.800  -0.641   0.835  0.00  0.00           H+0
HETATM   73  H   UNK     0      11.578  -1.061  -1.581  0.00  0.00           H+0
HETATM   74  H   UNK     0      10.025  -1.049  -0.699  0.00  0.00           H+0
HETATM   75  H   UNK     0      10.011   0.126  -2.965  0.00  0.00           H+0
HETATM   76  H   UNK     0      11.245   1.262  -2.319  0.00  0.00           H+0
HETATM   77  H   UNK     0       9.829   2.061  -0.614  0.00  0.00           H+0
HETATM   78  H   UNK     0       8.936   2.243  -2.142  0.00  0.00           H+0
HETATM   79  H   UNK     0       8.453  -0.015  -0.073  0.00  0.00           H+0
HETATM   80  H   UNK     0       7.473   1.430  -0.447  0.00  0.00           H+0
HETATM   81  H   UNK     0       6.676   0.597  -2.360  0.00  0.00           H+0
HETATM   82  H   UNK     0       7.945  -0.570  -2.722  0.00  0.00           H+0
HETATM   83  H   UNK     0       4.773  -0.007  -1.339  0.00  0.00           H+0
HETATM   84  H   UNK     0       4.459  -2.378   2.008  0.00  0.00           H+0
HETATM   85  H   UNK     0       6.064  -1.725   1.512  0.00  0.00           H+0
HETATM   86  H   UNK     0       5.584  -3.282   0.908  0.00  0.00           H+0
HETATM   87  H   UNK     0       3.198  -3.378  -0.547  0.00  0.00           H+0
HETATM   88  H   UNK     0       3.826  -2.393  -1.890  0.00  0.00           H+0
HETATM   89  H   UNK     0       4.912  -3.570  -1.106  0.00  0.00           H+0
HETATM   90  H   UNK     0       4.073  -0.335   3.400  0.00  0.00           H+0
HETATM   91  H   UNK     0       5.163   0.125   1.937  0.00  0.00           H+0
HETATM   92  H   UNK     0       4.073   2.121   3.326  0.00  0.00           H+0
HETATM   93  H   UNK     0       3.652   2.316   0.515  0.00  0.00           H+0
HETATM   94  H   UNK     0       1.818   2.164   3.153  0.00  0.00           H+0
HETATM   95  H   UNK     0       1.911   2.019   1.328  0.00  0.00           H+0
HETATM   96  H   UNK     0       2.146  -0.222   3.396  0.00  0.00           H+0
HETATM   97  H   UNK     0      -0.470   1.316   2.379  0.00  0.00           H+0
HETATM   98  H   UNK     0      -1.954   1.094   0.502  0.00  0.00           H+0
HETATM   99  H   UNK     0      -2.795  -1.255  -0.105  0.00  0.00           H+0
HETATM  100  H   UNK     0      -1.286  -1.873   0.575  0.00  0.00           H+0
HETATM  101  H   UNK     0       0.013  -0.240  -0.888  0.00  0.00           H+0
HETATM  102  H   UNK     0      -0.956  -2.638  -1.420  0.00  0.00           H+0
HETATM  103  H   UNK     0      -0.439  -1.641  -2.893  0.00  0.00           H+0
HETATM  104  H   UNK     0      -2.173  -1.738  -2.480  0.00  0.00           H+0
HETATM  105  H   UNK     0      -2.691   0.598  -1.941  0.00  0.00           H+0
HETATM  106  H   UNK     0      -1.163   0.507  -2.924  0.00  0.00           H+0
HETATM  107  H   UNK     0      -1.182   1.544  -1.458  0.00  0.00           H+0
HETATM  108  H   UNK     0      -3.818   0.294  -0.026  0.00  0.00           H+0
HETATM  109  H   UNK     0      -5.940  -0.368   0.175  0.00  0.00           H+0
HETATM  110  H   UNK     0      -7.002   3.269   0.904  0.00  0.00           H+0
HETATM  111  H   UNK     0      -7.214   3.381  -1.468  0.00  0.00           H+0
HETATM  112  H   UNK     0      -8.146   4.473   0.332  0.00  0.00           H+0
HETATM  113  H   UNK     0      -9.345   4.090  -0.988  0.00  0.00           H+0
HETATM  114  H   UNK     0      -9.105   2.271   1.483  0.00  0.00           H+0
HETATM  115  H   UNK     0     -10.321   2.236   0.218  0.00  0.00           H+0
HETATM  116  H   UNK     0     -12.133   3.382   2.933  0.00  0.00           H+0
HETATM  117  H   UNK     0     -12.457   2.814   1.257  0.00  0.00           H+0
HETATM  118  H   UNK     0      -9.754   1.819  -3.193  0.00  0.00           H+0
HETATM  119  H   UNK     0      -9.085  -0.670  -1.643  0.00  0.00           H+0
HETATM  120  H   UNK     0     -10.074  -0.381  -4.539  0.00  0.00           H+0
HETATM  121  H   UNK     0      -8.451  -0.820  -3.926  0.00  0.00           H+0
HETATM  122  H   UNK     0      -9.104  -2.692  -3.137  0.00  0.00           H+0
HETATM  123  H   UNK     0     -11.818   0.060  -2.617  0.00  0.00           H+0
HETATM  124  H   UNK     0     -11.272   0.387  -0.986  0.00  0.00           H+0
HETATM  125  H   UNK     0     -11.546  -2.401  -2.248  0.00  0.00           H+0
HETATM  126  H   UNK     0     -12.918  -1.662   0.246  0.00  0.00           H+0
HETATM  127  H   UNK     0     -13.542  -2.549  -1.215  0.00  0.00           H+0
HETATM  128  H   UNK     0     -13.458  -0.738  -1.247  0.00  0.00           H+0
HETATM  129  H   UNK     0     -11.088  -2.912   0.291  0.00  0.00           H+0
HETATM  130  H   UNK     0     -10.583  -1.252   0.412  0.00  0.00           H+0
HETATM  131  H   UNK     0      -9.644  -2.438  -0.643  0.00  0.00           H+0
HETATM  132  H   UNK     0      -5.622  -0.426   3.197  0.00  0.00           H+0
HETATM  133  H   UNK     0      -8.144  -0.733   1.422  0.00  0.00           H+0
HETATM  134  H   UNK     0      -7.985   0.497   2.793  0.00  0.00           H+0
HETATM  135  H   UNK     0      -7.931  -1.278   3.076  0.00  0.00           H+0
HETATM  136  H   UNK     0      -6.218  -2.646   2.771  0.00  0.00           H+0
HETATM  137  H   UNK     0      -6.729  -2.258   1.057  0.00  0.00           H+0
HETATM  138  H   UNK     0      -4.971  -2.216   1.474  0.00  0.00           H+0
CONECT    1    2   60   61   62                                             
CONECT    2    1    3   63   64                                             
CONECT    3    2    4   65   66                                             
CONECT    4    3    5   67   68                                             
CONECT    5    4    6   69   70                                             
CONECT    6    5    7   71   72                                             
CONECT    7    6    8   73   74                                             
CONECT    8    7    9   75   76                                             
CONECT    9    8   10   77   78                                             
CONECT   10    9   11   79   80                                             
CONECT   11   10   12   81   82                                             
CONECT   12   11   13   14                                                  
CONECT   13   12                                                            
CONECT   14   12   15   83                                                  
CONECT   15   14   16   17   18                                             
CONECT   16   15   84   85   86                                             
CONECT   17   15   87   88   89                                             
CONECT   18   15   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21   25                                                  
CONECT   21   20   22   90   91                                             
CONECT   22   21   23   24   92                                             
CONECT   23   22   93                                                       
CONECT   24   22   25   94   95                                             
CONECT   25   24   26   20   96                                             
CONECT   26   25   27   28                                                  
CONECT   27   26                                                            
CONECT   28   26   29   97                                                  
CONECT   29   28   30   34   98                                             
CONECT   30   29   31   99  100                                             
CONECT   31   30   32   33  101                                             
CONECT   32   31  102  103  104                                             
CONECT   33   31  105  106  107                                             
CONECT   34   29   35   36                                                  
CONECT   35   34                                                            
CONECT   36   34   37  108                                                  
CONECT   37   36   38   57  109                                             
CONECT   38   37   39   40                                                  
CONECT   39   38                                                            
CONECT   40   38   41  110                                                  
CONECT   41   40   42   47  111                                             
CONECT   42   41   43  112  113                                             
CONECT   43   42   44  114  115                                             
CONECT   44   43   45   46                                                  
CONECT   45   44  116  117                                                  
CONECT   46   44                                                            
CONECT   47   41   48   49                                                  
CONECT   48   47                                                            
CONECT   49   47   50  118                                                  
CONECT   50   49   51   53  119                                             
CONECT   51   50   52  120  121                                             
CONECT   52   51  122                                                       
CONECT   53   50   54  123  124                                             
CONECT   54   53   55   56  125                                             
CONECT   55   54  126  127  128                                             
CONECT   56   54  129  130  131                                             
CONECT   57   37   58   59  132                                             
CONECT   58   57  133  134  135                                             
CONECT   59   57  136  137  138                                             
CONECT   60    1                                                            
CONECT   61    1                                                            
CONECT   62    1                                                            
CONECT   63    2                                                            
CONECT   64    2                                                            
CONECT   65    3                                                            
CONECT   66    3                                                            
CONECT   67    4                                                            
CONECT   68    4                                                            
CONECT   69    5                                                            
CONECT   70    5                                                            
CONECT   71    6                                                            
CONECT   72    6                                                            
CONECT   73    7                                                            
CONECT   74    7                                                            
CONECT   75    8                                                            
CONECT   76    8                                                            
CONECT   77    9                                                            
CONECT   78    9                                                            
CONECT   79   10                                                            
CONECT   80   10                                                            
CONECT   81   11                                                            
CONECT   82   11                                                            
CONECT   83   14                                                            
CONECT   84   16                                                            
CONECT   85   16                                                            
CONECT   86   16                                                            
CONECT   87   17                                                            
CONECT   88   17                                                            
CONECT   89   17                                                            
CONECT   90   21                                                            
CONECT   91   21                                                            
CONECT   92   22                                                            
CONECT   93   23                                                            
CONECT   94   24                                                            
CONECT   95   24                                                            
CONECT   96   25                                                            
CONECT   97   28                                                            
CONECT   98   29                                                            
CONECT   99   30                                                            
CONECT  100   30                                                            
CONECT  101   31                                                            
CONECT  102   32                                                            
CONECT  103   32                                                            
CONECT  104   32                                                            
CONECT  105   33                                                            
CONECT  106   33                                                            
CONECT  107   33                                                            
CONECT  108   36                                                            
CONECT  109   37                                                            
CONECT  110   40                                                            
CONECT  111   41                                                            
CONECT  112   42                                                            
CONECT  113   42                                                            
CONECT  114   43                                                            
CONECT  115   43                                                            
CONECT  116   45                                                            
CONECT  117   45                                                            
CONECT  118   49                                                            
CONECT  119   50                                                            
CONECT  120   51                                                            
CONECT  121   51                                                            
CONECT  122   52                                                            
CONECT  123   53                                                            
CONECT  124   53                                                            
CONECT  125   54                                                            
CONECT  126   55                                                            
CONECT  127   55                                                            
CONECT  128   55                                                            
CONECT  129   56                                                            
CONECT  130   56                                                            
CONECT  131   56                                                            
CONECT  132   57                                                            
CONECT  133   58                                                            
CONECT  134   58                                                            
CONECT  135   58                                                            
CONECT  136   59                                                            
CONECT  137   59                                                            
CONECT  138   59                                                            
MASTER        0    0    0    0    0    0    0    0  138    0  276    0
END
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3D PDB for NP0004732 (Halovir D)

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SMILES for NP0004732 (Halovir D)
[H]OC([H])([H])[C@@]([H])(N([H])C(=O)[C@]([H])(N([H])C(=O)[C@@]([H])(N([H])C(=O)[C@@]([H])(N([H])C(=O)[C@@]1([H])N(C(=O)C(N([H])C(=O)C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])[C@@]([H])(O[H])C1([H])[H])C([H])([H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])C([H])([H])C(=O)N([H])[H])C([H])([H])C([H])(C([H])([H])[H])C([H])([H])[H]
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INCHI for NP0004732 (Halovir D)
InChI=1S/C43H79N7O9/c1-10-11-12-13-14-15-16-17-18-19-36(54)49-43(8,9)42(59)50-25-31(52)24-34(50)40(57)47-33(23-28(4)5)39(56)48-37(29(6)7)41(58)46-32(20-21-35(44)53)38(55)45-30(26-51)22-27(2)3/h27-34,37,51-52H,10-26H2,1-9H3,(H2,44,53)(H,45,55)(H,46,58)(H,47,57)(H,48,56)(H,49,54)/t30-,31-,32+,33-,34-,37-/m0/s1
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View in JSmolView NMR Assignments
Synonyms
ValueSource
2-{[(2S)-1-hydroxy-2-{[1-hydroxy-2-({hydroxy[(2S,4S)-4-hydroxy-1-{2-[(1-hydroxydodecylidene)amino]-2-methylpropanoyl}pyrrolidin-2-yl]methylidene}amino)-4-methylpentylidene]amino}-3-methylbutylidene]amino}-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]pentanediimidateGenerator
Chemical FormulaC43H79N7O9
Average Mass838.1450 Da
Monoisotopic Mass837.59393 Da
IUPAC Name(2R)-2-[(2S)-2-[(2S)-2-{[(2S,4S)-1-(2-dodecanamido-2-methylpropanoyl)-4-hydroxypyrrolidin-2-yl]formamido}-4-methylpentanamido]-3-methylbutanamido]-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]pentanediamide
Traditional Name(2R)-2-[(2S)-2-[(2S)-2-{[(2S,4S)-1-(2-dodecanamido-2-methylpropanoyl)-4-hydroxypyrrolidin-2-yl]formamido}-4-methylpentanamido]-3-methylbutanamido]-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]pentanediamide
CAS Registry NumberNot Available
SMILES
CCCCCCCCCCCC(=O)NC(C)(C)C(=O)N1C[C@@H](O)C[C@H]1C(=O)NC(CC(C)C)C(=O)N[C@@H](C(C)C)C(=O)NC(CCC(N)=O)C(=O)N[C@H](CO)CC(C)C
InChI Identifier
InChI=1S/C43H79N7O9/c1-10-11-12-13-14-15-16-17-18-19-36(54)49-43(8,9)42(59)50-25-31(52)24-34(50)40(57)47-33(23-28(4)5)39(56)48-37(29(6)7)41(58)46-32(20-21-35(44)53)38(55)45-30(26-51)22-27(2)3/h27-34,37,51-52H,10-26H2,1-9H3,(H2,44,53)(H,45,55)(H,46,58)(H,47,57)(H,48,56)(H,49,54)/t30-,31-,32?,33?,34-,37-/m0/s1
InChI KeyXLHSKXDZYNSELH-NUNUOSAZSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Scytalidium sp.NPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.6ALOGPS
logP2.73ChemAxon
logS-4.9ALOGPS
pKa (Strongest Acidic)11.87ChemAxon
pKa (Strongest Basic)-2.8ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count9ChemAxon
Hydrogen Donor Count8ChemAxon
Polar Surface Area249.36 ŲChemAxon
Rotatable Bond Count29ChemAxon
Refractivity225.27 m³·mol⁻¹ChemAxon
Polarizability96.22 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA002673  
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID10479907  
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound21777387  
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References