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Record Information
Version2.0
Created at2020-12-09 01:53:49 UTC
Updated at2021-07-15 16:49:10 UTC
NP-MRD IDNP0004433
Secondary Accession NumbersNone
Natural Product Identification
Common NameCDA3a
Provided ByNPAtlasNPAtlas Logo
Description CDA3a is found in Streptomyces coelicolor and Streptomyces coelicolor A3\(2\). Based on a literature review very few articles have been published on 3-[(3Z,6S,9R,15S,18R,21S,24S,27R,30S,31R)-15,21,24-tris(carboxymethyl)-30-{[(2S)-1,3-dihydroxy-2-{[hydroxy(3-propyloxiran-2-yl)methylidene]amino}propylidene]amino}-5,8,11,14,17,20,23,26,29-nonahydroxy-9-[(S)-hydroxy(C-hydroxycarbonimidoyl)methyl]-18-(4-hydroxyphenyl)-27-[(1H-indol-3-yl)methyl]-3-[(1H-indol-3-yl)methylidene]-31-methyl-2-oxo-1-oxa-4,7,10,13,16,19,22,25,28-nonaazacyclohentriaconta-4,7,10,13,16,19,22,25,28-nonaen-6-yl]propanoic acid.
Structure
Thumb
Synonyms
ValueSource
3-[(3Z,6S,9R,15S,18R,21S,24S,27R,30S,31R)-15,21,24-Tris(carboxymethyl)-30-{[(2S)-1,3-dihydroxy-2-{[hydroxy(3-propyloxiran-2-yl)methylidene]amino}propylidene]amino}-5,8,11,14,17,20,23,26,29-nonahydroxy-9-[(S)-hydroxy(C-hydroxycarbonimidoyl)methyl]-18-(4-hydroxyphenyl)-27-[(1H-indol-3-yl)methyl]-3-[(1H-indol-3-yl)methylidene]-31-methyl-2-oxo-1-oxa-4,7,10,13,16,19,22,25,28-nonaazacyclohentriaconta-4,7,10,13,16,19,22,25,28-nonaen-6-yl]propanoateGenerator
Chemical FormulaC66H76N14O26
Average Mass1481.4060 Da
Monoisotopic Mass1480.50552 Da
IUPAC Name3-[(3Z,6S,9R,15S,18R,21S,24S,27R,30S,31R)-9-[(S)-carbamoyl(hydroxy)methyl]-15,21,24-tris(carboxymethyl)-30-[(2S)-3-hydroxy-2-{[(2S,3S)-3-propyloxiran-2-yl]formamido}propanamido]-18-(4-hydroxyphenyl)-27-[(1H-indol-3-yl)methyl]-3-[(1H-indol-3-yl)methylidene]-31-methyl-2,5,8,11,14,17,20,23,26,29-decaoxo-1-oxa-4,7,10,13,16,19,22,25,28-nonaazacyclohentriacontan-6-yl]propanoic acid
Traditional Name3-[(3Z,6S,9R,15S,18R,21S,24S,27R,30S,31R)-9-[(S)-carbamoyl(hydroxy)methyl]-15,21,24-tris(carboxymethyl)-30-[(2S)-3-hydroxy-2-{[(2S,3S)-3-propyloxiran-2-yl]formamido}propanamido]-18-(4-hydroxyphenyl)-27-(1H-indol-3-ylmethyl)-3-(1H-indol-3-ylmethylidene)-31-methyl-2,5,8,11,14,17,20,23,26,29-decaoxo-1-oxa-4,7,10,13,16,19,22,25,28-nonaazacyclohentriacontan-6-yl]propanoic acid
CAS Registry NumberNot Available
SMILES
CCCC1OC1C(=O)N[C@@H](CO)C(=O)N[C@H]1[C@@H](C)OC(=O)\C(NC(=O)[C@H](CCC(O)=O)NC(=O)[C@H](NC(=O)CNC(=O)[C@H](CC(O)=O)NC(=O)[C@H](NC(=O)[C@H](CC(O)=O)NC(=O)[C@H](CC(O)=O)NC(=O)[C@@H](CC2=CNC3=CC=CC=C23)NC1=O)C1=CC=C(O)C=C1)[C@H](O)C(N)=O)=C\C1=CNC2=CC=CC=C12
InChI Identifier
InChI=1S/C66H76N14O26/c1-3-8-44-54(106-44)65(103)77-43(27-81)61(99)79-50-28(2)105-66(104)42(20-31-25-69-36-12-7-5-10-34(31)36)76-57(95)37(17-18-46(84)85)71-64(102)52(53(92)55(67)93)78-45(83)26-70-56(94)39(21-47(86)87)75-63(101)51(29-13-15-32(82)16-14-29)80-60(98)41(23-49(90)91)73-59(97)40(22-48(88)89)72-58(96)38(74-62(50)100)19-30-24-68-35-11-6-4-9-33(30)35/h4-7,9-16,20,24-25,28,37-41,43-44,50-54,68-69,81-82,92H,3,8,17-19,21-23,26-27H2,1-2H3,(H2,67,93)(H,70,94)(H,71,102)(H,72,96)(H,73,97)(H,74,100)(H,75,101)(H,76,95)(H,77,103)(H,78,83)(H,79,99)(H,80,98)(H,84,85)(H,86,87)(H,88,89)(H,90,91)/b42-20-/t28-,37+,38-,39+,40+,41+,43+,44?,50+,51-,52-,53+,54?/m1/s1
InChI KeySLGCKWXDQZMUCF-SSNLTMHJSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Streptomyces coelicolorLOTUS Database
Streptomyces coelicolor A3(2)NPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.71ALOGPS
logP-6.2ChemAxon
logS-4.5ALOGPS
pKa (Strongest Acidic)3.21ChemAxon
pKa (Strongest Basic)-6ChemAxon
Physiological Charge-4ChemAxon
Hydrogen Acceptor Count25ChemAxon
Hydrogen Donor Count21ChemAxon
Polar Surface Area643.49 ŲChemAxon
Rotatable Bond Count22ChemAxon
Refractivity353.13 m³·mol⁻¹ChemAxon
Polarizability142.93 ųChemAxon
Number of Rings7ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA020317
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78443604
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound102077146
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References