Np mrd loader

Record Information
Version2.0
Created at2020-12-09 01:53:47 UTC
Updated at2021-07-15 16:49:10 UTC
NP-MRD IDNP0004432
Secondary Accession NumbersNone
Natural Product Identification
Common NameCDA2a
Provided ByNPAtlasNPAtlas Logo
Description CDA2a is found in Streptomyces coelicolor and Streptomyces coelicolor A3\(2\). Based on a literature review very few articles have been published on 3-[(3Z,6S,9R,15S,18R,21S,24S,27R,30S,31R)-15,21,24-tris(carboxymethyl)-30-{[(2S)-1,3-dihydroxy-2-{[hydroxy(3-propyloxiran-2-yl)methylidene]amino}propylidene]amino}-5,8,11,14,17,20,23,26,29-nonahydroxy-9-[(S)-(C-hydroxycarbonimidoyl)(phosphonooxy)methyl]-18-(4-hydroxyphenyl)-27-[(1H-indol-3-yl)methyl]-3-[(1H-indol-3-yl)methylidene]-31-methyl-2-oxo-1-oxa-4,7,10,13,16,19,22,25,28-nonaazacyclohentriaconta-4,7,10,13,16,19,22,25,28-nonaen-6-yl]propanoic acid.
Structure
Thumb
Synonyms
ValueSource
3-[(3Z,6S,9R,15S,18R,21S,24S,27R,30S,31R)-15,21,24-Tris(carboxymethyl)-30-{[(2S)-1,3-dihydroxy-2-{[hydroxy(3-propyloxiran-2-yl)methylidene]amino}propylidene]amino}-5,8,11,14,17,20,23,26,29-nonahydroxy-9-[(S)-(C-hydroxycarbonimidoyl)(phosphonooxy)methyl]-18-(4-hydroxyphenyl)-27-[(1H-indol-3-yl)methyl]-3-[(1H-indol-3-yl)methylidene]-31-methyl-2-oxo-1-oxa-4,7,10,13,16,19,22,25,28-nonaazacyclohentriaconta-4,7,10,13,16,19,22,25,28-nonaen-6-yl]propanoateGenerator
Chemical FormulaC66H77N14O29P
Average Mass1561.3850 Da
Monoisotopic Mass1560.47185 Da
IUPAC Name3-[(3Z,6S,9R,15S,18R,21S,24S,27R,30S,31R)-9-[(S)-carbamoyl(phosphonooxy)methyl]-15,21,24-tris(carboxymethyl)-30-[(2S)-3-hydroxy-2-{[(2S,3R)-3-propyloxiran-2-yl]formamido}propanamido]-18-(4-hydroxyphenyl)-27-[(1H-indol-3-yl)methyl]-3-[(1H-indol-3-yl)methylidene]-31-methyl-2,5,8,11,14,17,20,23,26,29-decaoxo-1-oxa-4,7,10,13,16,19,22,25,28-nonaazacyclohentriacontan-6-yl]propanoic acid
Traditional Name3-[(3Z,6S,9R,15S,18R,21S,24S,27R,30S,31R)-9-[(S)-carbamoyl(phosphonooxy)methyl]-15,21,24-tris(carboxymethyl)-30-[(2S)-3-hydroxy-2-{[(2S,3R)-3-propyloxiran-2-yl]formamido}propanamido]-18-(4-hydroxyphenyl)-27-(1H-indol-3-ylmethyl)-3-(1H-indol-3-ylmethylidene)-31-methyl-2,5,8,11,14,17,20,23,26,29-decaoxo-1-oxa-4,7,10,13,16,19,22,25,28-nonaazacyclohentriacontan-6-yl]propanoic acid
CAS Registry NumberNot Available
SMILES
CCCC1OC1C(=O)N[C@@H](CO)C(=O)N[C@H]1[C@@H](C)OC(=O)\C(NC(=O)[C@H](CCC(O)=O)NC(=O)[C@H](NC(=O)CNC(=O)[C@H](CC(O)=O)NC(=O)[C@H](NC(=O)[C@H](CC(O)=O)NC(=O)[C@H](CC(O)=O)NC(=O)[C@@H](CC2=CNC3=CC=CC=C23)NC1=O)C1=CC=C(O)C=C1)[C@H](OP(O)(O)=O)C(N)=O)=C\C1=CNC2=CC=CC=C12
InChI Identifier
InChI=1S/C66H77N14O29P/c1-3-8-44-53(108-44)65(102)77-43(27-81)61(98)79-50-28(2)107-66(103)42(20-31-25-69-36-12-7-5-10-34(31)36)76-57(94)37(17-18-46(84)85)71-64(101)52(54(55(67)92)109-110(104,105)106)78-45(83)26-70-56(93)39(21-47(86)87)75-63(100)51(29-13-15-32(82)16-14-29)80-60(97)41(23-49(90)91)73-59(96)40(22-48(88)89)72-58(95)38(74-62(50)99)19-30-24-68-35-11-6-4-9-33(30)35/h4-7,9-16,20,24-25,28,37-41,43-44,50-54,68-69,81-82H,3,8,17-19,21-23,26-27H2,1-2H3,(H2,67,92)(H,70,93)(H,71,101)(H,72,95)(H,73,96)(H,74,99)(H,75,100)(H,76,94)(H,77,102)(H,78,83)(H,79,98)(H,80,97)(H,84,85)(H,86,87)(H,88,89)(H,90,91)(H2,104,105,106)/b42-20-/t28-,37+,38-,39+,40+,41+,43+,44?,50+,51-,52-,53?,54+/m1/s1
InChI KeyHDBCLPTUKVHJRE-NHTRHERRSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Streptomyces coelicolorLOTUS Database
Streptomyces coelicolor A3(2)NPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.76ALOGPS
logP-6.3ChemAxon
logS-5ALOGPS
pKa (Strongest Acidic)1ChemAxon
pKa (Strongest Basic)-6ChemAxon
Physiological Charge-6ChemAxon
Hydrogen Acceptor Count27ChemAxon
Hydrogen Donor Count22ChemAxon
Polar Surface Area690.02 ŲChemAxon
Rotatable Bond Count24ChemAxon
Refractivity364 m³·mol⁻¹ChemAxon
Polarizability148.43 ųChemAxon
Number of Rings7ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA020316
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78443603
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound102077143
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References