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Record Information
Version2.0
Created at2020-12-09 00:58:10 UTC
Updated at2021-07-15 16:47:30 UTC
NP-MRD IDNP0003830
Secondary Accession NumbersNone
Natural Product Identification
Common NameDictyonamide B
Provided ByNPAtlasNPAtlas Logo
Description2-({2-[(2S)-2-[(2S)-2-{[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-{[(2S)-2-[(2S,3S)-2-[(2S,3S)-2-{[(2S)-2-amino-1-hydroxypropylidene]amino}-3-hydroxy-N-methylbutanamido]-3-{[(2R,3S,4S,5R)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy}-N-methylbutanamido]-1-hydroxy-3-methylbutylidene]amino}-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-1-hydroxy-3-methylbutylidene]amino}-N,3-dimethylpentanamido]-N,3-dimethylbutanamido]-1-hydroxyethylidene}amino)benzoic acid belongs to the class of organic compounds known as peptides. Peptides are compounds containing an amide derived from two or more amino carboxylic acid molecules (the same or different) by formation of a covalent bond from the carbonyl carbon of one to the nitrogen atom of another. Dictyonamide B is found in Unknown-fungus sp. (K063). Based on a literature review very few articles have been published on 2-({2-[(2S)-2-[(2S)-2-{[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-{[(2S)-2-[(2S,3S)-2-[(2S,3S)-2-{[(2S)-2-amino-1-hydroxypropylidene]amino}-3-hydroxy-N-methylbutanamido]-3-{[(2R,3S,4S,5R)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy}-N-methylbutanamido]-1-hydroxy-3-methylbutylidene]amino}-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-1-hydroxy-3-methylbutylidene]amino}-N,3-dimethylpentanamido]-N,3-dimethylbutanamido]-1-hydroxyethylidene}amino)benzoic acid.
Structure
Thumb
Synonyms
ValueSource
2-({2-[(2S)-2-[(2S)-2-{[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-{[(2S)-2-[(2S,3S)-2-[(2S,3S)-2-{[(2S)-2-amino-1-hydroxypropylidene]amino}-3-hydroxy-N-methylbutanamido]-3-{[(2R,3S,4S,5R)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy}-N-methylbutanamido]-1-hydroxy-3-methylbutylidene]amino}-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-1-hydroxy-3-methylbutylidene]amino}-N,3-dimethylpentanamido]-N,3-dimethylbutanamido]-1-hydroxyethylidene}amino)benzoateGenerator
Chemical FormulaC69H118N12O20
Average Mass1435.7670 Da
Monoisotopic Mass1434.85853 Da
IUPAC Name2-{2-[(2S)-2-[(2S,3R)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(3S)-2-[(2S,3S)-2-[(2S)-2-aminopropanamido]-3-hydroxy-N-methylbutanamido]-3-{[(2R,3S,4S,5R)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy}-N-methylbutanamido]-3-methylbutanamido]-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-3-methylbutanamido]-N,3-dimethylpentanamido]-N,3-dimethylbutanamido]acetamido}benzoic acid
Traditional Name2-{2-[(2S)-2-[(2S,3R)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(3S)-2-[(2S,3S)-2-[(2S)-2-aminopropanamido]-3-hydroxy-N-methylbutanamido]-3-{[(2R,3S,4S,5R)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy}-N-methylbutanamido]-3-methylbutanamido]-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-3-methylbutanamido]-N,3-dimethylpentanamido]-N,3-dimethylbutanamido]acetamido}benzoic acid
CAS Registry NumberNot Available
SMILES
CCC(C)[C@H](NC(=O)[C@H](C(C)C)N(C)C(=O)[C@H](C(C)C)N(C)C(=O)[C@H](C(C)C)N(C)C(=O)[C@@H](NC(=O)[C@H](C(C)C)N(C)C(=O)[C@H]([C@H](C)O[C@]1(CO)O[C@H](CO)[C@@H](O)[C@@H]1O)N(C)C(=O)[C@@H](NC(=O)[C@H](C)N)[C@H](C)O)C(C)C)C(=O)N(C)[C@@H](C(C)C)C(=O)N(C)CC(=O)NC1=CC=CC=C1C(O)=O
InChI Identifier
InChI=1S/C69H118N12O20/c1-25-39(14)48(62(92)78(21)52(36(8)9)64(94)75(18)30-46(85)71-44-29-27-26-28-43(44)68(98)99)73-60(90)51(35(6)7)76(19)65(95)54(38(12)13)80(23)66(96)53(37(10)11)79(22)61(91)47(33(2)3)72-59(89)50(34(4)5)77(20)67(97)55(81(24)63(93)49(41(16)84)74-58(88)40(15)70)42(17)100-69(32-83)57(87)56(86)45(31-82)101-69/h26-29,33-42,45,47-57,82-84,86-87H,25,30-32,70H2,1-24H3,(H,71,85)(H,72,89)(H,73,90)(H,74,88)(H,98,99)/t39?,40-,41-,42-,45+,47-,48-,49-,50-,51-,52-,53-,54-,55-,56+,57-,69+/m0/s1
InChI KeyZKRHKJXJSFWIBA-QKBVGYJDSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Unknown-fungus sp. (K063)NPAtlas
Chemical Taxonomy
Description Belongs to the class of organic compounds known as peptides. Peptides are compounds containing an amide derived from two or more amino carboxylic acid molecules (the same or different) by formation of a covalent bond from the carbonyl carbon of one to the nitrogen atom of another.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentPeptides
Alternative Parents
Substituents
  • Alpha peptide
  • Isoleucine or derivatives
  • Acylaminobenzoic acid or derivatives
  • N-acyl-alpha amino acid or derivatives
  • Valine or derivatives
  • Alpha-amino acid amide
  • C-glycosyl compound
  • Glycosyl compound
  • Alanine or derivatives
  • Alpha-amino acid or derivatives
  • Pentose monosaccharide
  • Benzoic acid or derivatives
  • Benzoic acid
  • Anilide
  • N-arylamide
  • Benzoyl
  • Ketal
  • Fatty amide
  • Benzenoid
  • Monosaccharide
  • N-acyl-amine
  • Monocyclic benzene moiety
  • Fatty acyl
  • Vinylogous amide
  • Tetrahydrofuran
  • Tertiary carboxylic acid amide
  • Secondary alcohol
  • Secondary carboxylic acid amide
  • Carboxamide group
  • Amino acid
  • Amino acid or derivatives
  • Acetal
  • Carboxylic acid
  • Organoheterocyclic compound
  • Monocarboxylic acid or derivatives
  • Oxacycle
  • Primary amine
  • Primary aliphatic amine
  • Carbonyl group
  • Organopnictogen compound
  • Organic oxide
  • Alcohol
  • Organonitrogen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Amine
  • Organic oxygen compound
  • Primary alcohol
  • Organic nitrogen compound
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-1.7ChemAxon
pKa (Strongest Acidic)3.56ChemAxon
pKa (Strongest Basic)8.09ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count21ChemAxon
Hydrogen Donor Count11ChemAxon
Polar Surface Area441.5 ŲChemAxon
Rotatable Bond Count37ChemAxon
Refractivity371.13 m³·mol⁻¹ChemAxon
Polarizability155.68 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA005019
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78436156
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139584490
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References