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Record Information
Version2.0
Created at2020-12-09 00:56:00 UTC
Updated at2021-08-19 23:59:34 UTC
NP-MRD IDNP0003774
Secondary Accession NumbersNone
Natural Product Identification
Common NameEmodin
Provided ByNPAtlasNPAtlas Logo
Description
Structure
Data?1624573901
Synonyms
Chemical FormulaC15H10O5
Average Mass270.2369 Da
Monoisotopic Mass270.05282 Da
IUPAC Name1,3,8-trihydroxy-6-methyl-9,10-dihydroanthracene-9,10-dione
Traditional Nameemodin
CAS Registry NumberNot Available
SMILES
CC1=CC(O)=C2C(=O)C3=C(O)C=C(O)C=C3C(=O)C2=C1
InChI Identifier
InChI=1S/C15H10O5/c1-6-2-8-12(10(17)3-6)15(20)13-9(14(8)19)4-7(16)5-11(13)18/h2-5,16-18H,1H3
InChI KeyRHMXXJGYXNZAPX-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species Where Detected
Species NameSourceReference
Aspergillus terreus IMI16043KNApSAcK Database
Guanomyces polythrixKNApSAcK Database
Pyrenochaeta terrestrisKNApSAcK Database
Thielavia subthermophilaKNApSAcK Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as hydroxyanthraquinones. Hydroxyanthraquinones are compounds containing a hydroxyanthraquinone moiety, which consists of an anthracene bearing a quinone, and hydroxyl group.
KingdomOrganic compounds
Super ClassBenzenoids
ClassAnthracenes
Sub ClassAnthraquinones
Direct ParentHydroxyanthraquinones
Alternative ParentsNot Available
SubstituentsNot Available
Molecular FrameworkAromatic homopolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting Point257.00 °C. @ 760.00 mm HgThe Good Scents Company Information System
Boiling Point586.87 °C. @ 760.00 mm Hg (est)The Good Scents Company Information System
Water Solubility2.04 mg/L @ 25 °C (est)The Good Scents Company Information System
LogP3.641 (est)The Good Scents Company Information System
Predicted Properties
PropertyValueSource
logP2.66ALOGPS
logP3.82ChemAxon
logS-3.1ALOGPS
pKa (Strongest Acidic)7.29ChemAxon
pKa (Strongest Basic)-5.4ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area94.83 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity72.13 m³·mol⁻¹ChemAxon
Polarizability26.58 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA020090
HMDB IDHMDB0035214
DrugBank IDDB07715
Phenol Explorer Compound IDNot Available
FoodDB IDFDB013862
KNApSAcK IDC00000555
Chemspider ID3107
KEGG Compound IDC10343
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkEmodin
METLIN IDNot Available
PubChem Compound3220
PDB IDNot Available
ChEBI ID42223
Good Scents IDrw1242531
References
General References
  1. Wells JM, Cole RJ, Kirksey JW: Emodin, a toxic metabolite of Aspergillus wentii isolated from weevil-damaged chestnuts. Appl Microbiol. 1975 Jul;30(1):26-8. [PubMed:1147616 ]
  2. Li HL, Chen HL, Li H, Zhang KL, Chen XY, Wang XW, Kong QY, Liu J: Regulatory effects of emodin on NF-kappaB activation and inflammatory cytokine expression in RAW 264.7 macrophages. Int J Mol Med. 2005 Jul;16(1):41-7. [PubMed:15942676 ]
  3. Sandholt IS, Olsen BB, Guerra B, Issinger OG: Resorufin: a lead for a new protein kinase CK2 inhibitor. Anticancer Drugs. 2009 Apr;20(4):238-48. doi: 10.1097/CAD.0b013e328326472e. [PubMed:19177021 ]
  4. Ubbink-Kok T, Anderson JA, Konings WN: Inhibition of electron transfer and uncoupling effects by emodin and emodinanthrone in Escherichia coli. Antimicrob Agents Chemother. 1986 Jul;30(1):147-51. doi: 10.1128/AAC.30.1.147. [PubMed:3019234 ]
  5. Lee SU, Shin HK, Min YK, Kim SH: Emodin accelerates osteoblast differentiation through phosphatidylinositol 3-kinase activation and bone morphogenetic protein-2 gene expression. Int Immunopharmacol. 2008 May;8(5):741-7. doi: 10.1016/j.intimp.2008.01.027. Epub 2008 Feb 22. [PubMed:18387517 ]