Record Information |
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Version | 2.0 |
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Created at | 2020-12-09 00:56:00 UTC |
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Updated at | 2021-08-19 23:59:34 UTC |
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NP-MRD ID | NP0003774 |
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Secondary Accession Numbers | None |
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Natural Product Identification |
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Common Name | Emodin |
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Provided By | NPAtlas |
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Description | Emodin, also known as schuttgelb or archin, belongs to the class of organic compounds known as hydroxyanthraquinones. Hydroxyanthraquinones are compounds containing a hydroxyanthraquinone moiety, which consists of an anthracene bearing a quinone, and hydroxyl group. Thus, emodin is considered to be an aromatic polyketide. Emodin is a secondary metabolite. Secondary metabolites are metabolically or physiologically non-essential metabolites that may serve a role as defense or signalling molecules. In some cases they are simply molecules that arise from the incomplete metabolism of other secondary metabolites. Emodin is found in Achyranthes bidentata, Aloe castellorum, Aloe vera, Asahinea chrysantha, Aspergillus aureoterreus, Aspergillus wentii, Canariomyces subthermophilus, Cascara sagrada, Cassia angustifolia , Cassia fistula, Chamaecrista nigricans, Cassia roxburghii, Catalpa longissima, Cortinarius basirubescens, Cortinarius sanguineus, Cratoxylum formosum, Dendrobium thyrsiflorum, Eriococcus coriaceus, Fagopyrum esculentum, Fagopyrum tataricum, Fallopia multiflora, Flavocetraria cucullata, Frangula alnus, Fulgensia canariensis, Hamigera avellanea, Heterodermia obscurata, Isatis tinctoria, Juniperus formosana, Larix kaempferi, Ligularia pleurocaulis, Monilinia fructicola, Monodictys sp., Nephroma laevigatum, Neurospora micropertusa, Osmanthus armatus, Penicillium restrictum, Persicaria hydropiper, Persicaria perfoliata, Picramnia hirsuta, Picramnia teapensis, Ploiarium alternifolium, Polygonum amplexicaule, Fallopia sachalinensis, Psorospermum tenuifolium, Pyrenophora catenaria, Rhamnus cathartica, Rhamnus formosana, Rhamnus kurdica, Rhamnus libanoticus, Rhamnus pallasii, Rhamnus prinoides , Rhamnus procumbens , Rhamnus saxatilis, Rhamnus triquetra, Rhamnus wightii , Rheum emodi , Rheum franzenbachii, Rheum racemiferum, Rheum rhaponticum, Rumex abyssinicus, Rumex acetosella , Rumex alpinus, Rumex aquaticus , Rumex chalepensis, Rumex confertus , Rumex cristatus, Rumex cyprius, Rumex hydrolapathum, Rumex libanoticus, Rumex obtusifolius , Rumex pulcher, Rumex scutatus , Saururus chinensis, Senna artemisioides, Senna lindheimeriana, Senna macranthera, Senna siamea, Senna spectabilis, Setophoma terrestris, Simaba orinocensis, Talaromyces brunneus, Talaromyces stipitatus, Tribulus terrestris , Trichoderma polysporum, Trichoderma viride, Ventilago denticulata, Ventilago madraspatana, Vismia guineensis and Xanthoria parietina. Emodin was first documented in 1975 (PMID: 1147616). Based on a literature review a small amount of articles have been published on Emodin (PMID: 15942676) (PMID: 19177021) (PMID: 3019234) (PMID: 18387517). |
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Structure | [H]OC1=C([H])C(O[H])=C2C(=O)C3=C(O[H])C([H])=C(C([H])=C3C(=O)C2=C1[H])C([H])([H])[H] InChI=1S/C15H10O5/c1-6-2-8-12(10(17)3-6)15(20)13-9(14(8)19)4-7(16)5-11(13)18/h2-5,16-18H,1H3 |
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Synonyms | Value | Source |
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1,3,8-Trihydroxy-6-methyl-9,10-anthracenedione | ChEBI | 1,3,8-Trihydroxy-6-methyl-9,10-anthraquinone | ChEBI | 3-METHYL-1,6,8-trihydroxyanthraquinone | ChEBI | Schuttgelb | ChEBI | 1,3, 8-Trihydroxy-6-methyl-9,10-anthraquinone | HMDB | 1,3,8-Trihydroxy-6-methyl-9,10-anthracenedione, 9ci | HMDB | 1,3,8-Trihydroxy-6-methylanthra-9,10-quinone | HMDB | 4,5,7-Trihydroxy-2-methylanthraquinone | HMDB | 6-Methyl-1,3,8-trihydroxy-9,10-anthracenedione | HMDB | 6-Methyl-1,3,8-trihydroxyanthraquinone | HMDB | 9,10-Anthracenedione, 1,3,8-trihydroxy-6-methyl- (9ci) | HMDB | Archin | HMDB | Emodol | HMDB | Frangula emodin | HMDB | Frangulic acid | HMDB | Frangulinic acid | HMDB | Rheum-emodin | HMDB | Emodin, rheum | HMDB | Emodin, frangula | HMDB | Rheum emodin | HMDB | Peristim | MeSH | Casanthranol | MeSH |
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Chemical Formula | C15H10O5 |
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Average Mass | 270.2369 Da |
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Monoisotopic Mass | 270.05282 Da |
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IUPAC Name | 1,3,8-trihydroxy-6-methyl-9,10-dihydroanthracene-9,10-dione |
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Traditional Name | emodin |
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CAS Registry Number | Not Available |
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SMILES | CC1=CC(O)=C2C(=O)C3=C(O)C=C(O)C=C3C(=O)C2=C1 |
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InChI Identifier | InChI=1S/C15H10O5/c1-6-2-8-12(10(17)3-6)15(20)13-9(14(8)19)4-7(16)5-11(13)18/h2-5,16-18H,1H3 |
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InChI Key | RHMXXJGYXNZAPX-UHFFFAOYSA-N |
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Experimental Spectra |
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| Not Available | Predicted Spectra |
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| Spectrum Type | Description | Depositor ID | Depositor Organization | Depositor | Deposition Date | View |
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1D NMR | 13C NMR Spectrum (1D, 25 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 252 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 50 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 75 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 101 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 126 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 151 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 176 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 201 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 13C NMR Spectrum (1D, 226 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum |
| Chemical Shift Submissions |
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| Not Available | Species |
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Species of Origin | |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as hydroxyanthraquinones. Hydroxyanthraquinones are compounds containing a hydroxyanthraquinone moiety, which consists of an anthracene bearing a quinone, and hydroxyl group. |
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Kingdom | Organic compounds |
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Super Class | Benzenoids |
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Class | Anthracenes |
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Sub Class | Anthraquinones |
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Direct Parent | Hydroxyanthraquinones |
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Alternative Parents | Not Available |
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Substituents | Not Available |
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Molecular Framework | Aromatic homopolycyclic compounds |
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External Descriptors | Not Available |
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Physical Properties |
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State | Not Available |
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Experimental Properties | |
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Predicted Properties | |
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