Np mrd loader

Record Information
Version1.0
Created at2020-11-23 18:25:33 UTC
Updated at2021-08-12 19:51:41 UTC
NP-MRD IDNP0002626
Secondary Accession NumbersNone
Natural Product Identification
Common NameD-Galactono-1,4-lactone
Provided ByBMRBBMRB logo
DescriptionD-glucono-1,4-lactone, also known as D-gluconate g-lactone, belongs to the class of organic compounds known as gamma butyrolactones. Gamma butyrolactones are compounds containing a gamma butyrolactone moiety, which consists of an aliphatic five-member ring with four carbon atoms, one oxygen atom, and bears a ketone group on the carbon adjacent to the oxygen atom. D-Galactono-1,4-lactone is found in Talaromyces flavus. It was first documented in 1992 (PMID: 1598757). Based on a literature review very few articles have been published on D-glucono-1,4-lactone (PMID: 17984079) (PMID: 20873960) (PMID: 11890895).
Structure
Thumb
Synonyms
ValueSource
D-Gluconic acid gamma-lactoneChEBI
D-Gluconic acid, gamma-lactoneChEBI
Glucono-gamma-lactoneChEBI
D-Gluconate g-lactoneGenerator
D-Gluconate gamma-lactoneGenerator
D-Gluconate γ-lactoneGenerator
D-Gluconic acid g-lactoneGenerator
D-Gluconic acid γ-lactoneGenerator
D-Gluconate, g-lactoneGenerator
D-Gluconate, gamma-lactoneGenerator
D-Gluconate, γ-lactoneGenerator
D-Gluconic acid, g-lactoneGenerator
D-Gluconic acid, γ-lactoneGenerator
Glucono-g-lactoneGenerator
Glucono-γ-lactoneGenerator
glucono-1,4-LactoneMeSH
Chemical FormulaC6H10O6
Average Mass178.1400 Da
Monoisotopic Mass178.04774 Da
IUPAC Name(3R,4R,5R)-5-[(1R)-1,2-dihydroxyethyl]-3,4-dihydroxyoxolan-2-one
Traditional NameD-glucono-1,4-lactone
CAS Registry NumberNot Available
SMILES
[H][C@@](O)(CO)[C@@]1([H])OC(=O)[C@]([H])(O)[C@@]1([H])O
InChI Identifier
InChI=1S/C6H10O6/c7-1-2(8)5-3(9)4(10)6(11)12-5/h2-5,7-10H,1H2/t2-,3-,4-,5-/m1/s1
InChI KeySXZYCXMUPBBULW-TXICZTDVSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, experimental)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Talaromyces flavusLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as gamma butyrolactones. Gamma butyrolactones are compounds containing a gamma butyrolactone moiety, which consists of an aliphatic five-member ring with four carbon atoms, one oxygen atom, and bears a ketone group on the carbon adjacent to the oxygen atom.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassLactones
Sub ClassGamma butyrolactones
Direct ParentGamma butyrolactones
Alternative Parents
Substituents
  • Gamma butyrolactone
  • Tetrahydrofuran
  • Secondary alcohol
  • Carboxylic acid ester
  • Oxacycle
  • Monocarboxylic acid or derivatives
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Primary alcohol
  • Organooxygen compound
  • Carbonyl group
  • Alcohol
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-2ALOGPS
logP-2.7ChemAxon
logS0.55ALOGPS
pKa (Strongest Acidic)11.62ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area107.22 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity34.78 m³·mol⁻¹ChemAxon
Polarizability15.47 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID92162
KEGG Compound IDNot Available
BioCyc IDGLUCONOGAMMALACTONE
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI ID16165
Good Scents IDNot Available
References
General References
  1. Ulrich EL, Akutsu H, Doreleijers JF, Harano Y, Ioannidis YE, Lin J, Livny M, Mading S, Maziuk D, Miller Z, Nakatani E, Schulte CF, Tolmie DE, Kent Wenger R, Yao H, Markley JL: BioMagResBank. Nucleic Acids Res. 2008 Jan;36(Database issue):D402-8. doi: 10.1093/nar/gkm957. Epub 2007 Nov 4. [PubMed:17984079 ]
  2. Zeng Y, Li Y, Gu Y, Zhang S: [Studies on the beta-D-fucosidase from Aspergillus phoenicis]. Wei Sheng Wu Xue Bao. 1992 Apr;32(2):105-14. [PubMed:1598757 ]
  3. Saluk-Juszczak J: A comparative study of antioxidative activity of calcium-D-glucarate, sodium-D-gluconate and D-glucono-1,4-lactone in a human blood platelet model. Platelets. 2010;21(8):632-40. doi: 10.3109/09537104.2010.512210. Epub 2010 Sep 27. [PubMed:20873960 ]
  4. Singh J, DiMarco J, Kissick TP, Deshpande P, Gougoutas JZ: Confirmation of the structure of tetra-O-(tert-butyldimethylsilyl)-D-glucono-1,4-lactone formed by silylation of D-glucono-1,5-lactone. Carbohydr Res. 2002 Mar 15;337(6):565-8. doi: 10.1016/s0008-6215(02)00014-9. [PubMed:11890895 ]