NP-MRD: Showing NP-Card for De-N-methylpamamycin-593B (NP0001664)

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Record Information

Version

1.0

Created at

2020-09-23 02:00:43 UTC

Updated at

2021-08-10 02:56:08 UTC

NP-MRD ID

NP0001664

Secondary Accession Numbers

None

Natural Product Identification

Common Name

De-N-methylpamamycin-593B

Provided By

NPAtlas

Description

De-N-methylpamamycin-593B is found in Streptomyces alboniger and Streptomyces alboniger IFO 12738. It was first documented in 1999 (PMID: 10348051). Based on a literature review very few articles have been published on (1R,2R,5S,7S,10R,11S,14R,16S)-2-ethyl-11-methyl-14-[(1R)-1-[(2R,5S)-5-[(2R)-2-(methylamino)pentyl]oxolan-2-yl]ethyl]-5-propyl-4,13,19,20-tetraoxatricyclo[14.2.1.1⁷,¹⁰]Icosane-3,12-dione.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652307012117053D          

101104  0  0  0  0            999 V2000
   -6.8570   -0.5789   -3.3004 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6591   -1.1540   -2.5812 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.6633   -0.8449   -1.1211 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.6448    0.6429   -0.8389 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.6485    0.9367    0.6424 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.2847   -0.2422    1.5131 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.4237    0.2413    2.9400 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.9789    0.2471    3.4757 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.4110   -0.8466    2.6020 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.9790   -0.5690    1.3719 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9293   -0.8747    2.4900 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4249   -2.0585    3.2948 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2848    0.3664    3.0326 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6188    0.5864    4.2536 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4687    1.1750    2.3882 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7881    1.2606    1.8759 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6987    0.0846    2.2137 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8565   -0.0475    3.7304 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0738    0.1697    1.6637 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8097   -1.0980    2.1503 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.8128   -1.3050    0.9907 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.5998   -0.0716    0.1850 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.0453   -0.0583   -1.2165 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.4757   -0.2539   -1.4883 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.1579   -1.4996   -1.1177 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.6774   -2.7801   -1.7177 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.8015   -2.8760   -3.2099 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8244    0.1280   -2.8544 N   0  0  2  0  0  0  0  0  0  0  0  0
    6.5583    1.5861   -2.9198 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1777    0.0618    0.2754 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9232    1.5526    0.4360 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0161    2.4773   -0.2449 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1512    3.0501    0.4258 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.3402    2.3680   -0.2996 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.7193    2.2822   -1.6646 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4338    1.8193   -1.4330 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4363    1.4145   -2.6577 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.8527    0.0633   -2.7817 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7835   -0.8250   -1.6190 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9192    1.4974   -2.5400 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4097    1.7200   -3.7232 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6872    1.3793   -1.4659 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7386   -0.8142   -4.3646 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7947   -1.0457   -2.9352 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9595    0.5119   -3.1481 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7136   -0.9228   -3.0758 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7733   -2.2750   -2.6691 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8919   -1.3849   -0.5864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6425   -1.2385   -0.7034 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7150    0.9503   -1.1315 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6201    1.3656    0.9903 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9101    1.7491    0.8396 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9648   -1.1046    1.3122 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8696    1.2400    3.0266 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0547   -0.4591    3.5074 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0538   -0.0221    4.5449 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5888    1.2458    3.2602 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8477   -1.8112    2.9416 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6501   -1.0551    1.4309 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3355   -2.1925    3.0849 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9474   -2.9789    2.9831 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6352   -1.8870    4.3513 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3009    2.1283    2.4228 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2522   -0.8759    1.8723 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4724   -0.9897    3.8619 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9178   -0.2755    4.2392 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4555    0.7566    4.1643 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6598    1.0124    2.0335 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3195   -0.9179    3.1035 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1389   -1.9712    2.1254 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5894   -2.2403    0.4667 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7935   -1.3425    1.5150 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0447    0.7956    0.7684 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7504    0.9220   -1.6915 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4316   -0.8392   -1.7649 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0261    0.5668   -0.8699 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.2275   -1.3848   -1.5691 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4256   -1.6101   -0.0347 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5977   -3.0135   -1.4901 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2361   -3.6657   -1.3043 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.6070   -2.2015   -3.5671 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8907   -2.6530   -3.7756 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1473   -3.9022   -3.5252 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1885   -0.3473   -3.5467 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7095    1.9894   -1.9132 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5615    1.7976   -3.3345 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3185    2.0670   -3.5767 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9745    1.9710    0.3075 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9986    0.5466   -0.0843 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5892    3.3569   -0.7005 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3123    4.1424    0.1280 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2516    3.0415    1.4902 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4833    1.4222    0.2073 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2167    3.0096   -0.2675 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6041    3.3216   -2.0448 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1483    1.9140   -3.6593 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8041    0.1836   -3.1896 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3671   -0.5051   -3.6155 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4757   -1.8458   -1.9898 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9104   -0.5075   -0.9923 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6318   -0.8543   -0.9535 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 17 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
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 26 27  1  0  0  0  0
 24 28  1  0  0  0  0
 28 29  1  0  0  0  0
 22 30  1  0  0  0  0
 16 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  0  0  0  0
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 37 40  1  0  0  0  0
 40 41  2  0  0  0  0
 40 42  1  0  0  0  0
 42  4  1  0  0  0  0
 10  6  1  0  0  0  0
 30 19  1  0  0  0  0
 36 32  1  0  0  0  0
  1 43  1  0  0  0  0
  1 44  1  0  0  0  0
  1 45  1  0  0  0  0
  2 46  1  0  0  0  0
  2 47  1  0  0  0  0
  3 48  1  0  0  0  0
  3 49  1  0  0  0  0
  4 50  1  6  0  0  0
  5 51  1  0  0  0  0
  5 52  1  0  0  0  0
  6 53  1  1  0  0  0
  7 54  1  0  0  0  0
  7 55  1  0  0  0  0
  8 56  1  0  0  0  0
  8 57  1  0  0  0  0
  9 58  1  1  0  0  0
 11 59  1  6  0  0  0
 12 60  1  0  0  0  0
 12 61  1  0  0  0  0
 12 62  1  0  0  0  0
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 39100  1  0  0  0  0
 39101  1  0  0  0  0
M  END

     RDKit          3D

101104  0  0  0  0  0  0  0  0999 V2000
   -6.8570   -0.5789   -3.3004 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6591   -1.1540   -2.5812 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6633   -0.8449   -1.1211 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6448    0.6429   -0.8389 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.6485    0.9367    0.6424 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2847   -0.2422    1.5131 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.4237    0.2413    2.9400 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9789    0.2471    3.4757 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4110   -0.8466    2.6020 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.9790   -0.5690    1.3719 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9293   -0.8747    2.4900 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4249   -2.0585    3.2948 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2848    0.3664    3.0326 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6188    0.5864    4.2536 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4687    1.1750    2.3882 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7881    1.2606    1.8759 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6987    0.0846    2.2137 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8565   -0.0475    3.7304 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0738    0.1697    1.6637 C   0  0  1  0  0  0  0  0  0  0  0  0
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    4.5998   -0.0716    0.1850 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.0453   -0.0583   -1.2165 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4757   -0.2539   -1.4883 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.1579   -1.4996   -1.1177 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6774   -2.7801   -1.7177 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8015   -2.8760   -3.2099 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8244    0.1280   -2.8544 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.5583    1.5861   -2.9198 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1777    0.0618    0.2754 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9232    1.5526    0.4360 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0161    2.4773   -0.2449 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1512    3.0501    0.4258 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3402    2.3680   -0.2996 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7193    2.2822   -1.6646 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4338    1.8193   -1.4330 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4363    1.4145   -2.6577 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.8527    0.0633   -2.7817 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7835   -0.8250   -1.6190 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9192    1.4974   -2.5400 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4097    1.7200   -3.7232 O   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652307012117053D          

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 10  6  1  0  0  0  0
 30 19  1  0  0  0  0
 36 32  1  0  0  0  0
  1 43  1  0  0  0  0
  1 44  1  0  0  0  0
  1 45  1  0  0  0  0
  2 46  1  0  0  0  0
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  3 48  1  0  0  0  0
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  4 50  1  6  0  0  0
  5 51  1  0  0  0  0
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  6 53  1  1  0  0  0
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 39 99  1  0  0  0  0
 39100  1  0  0  0  0
 39101  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0001664

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]N(C([H])([H])[H])[C@]([H])(C([H])([H])C([H])([H])C([H])([H])[H])C([H])([H])[C@@]1([H])O[C@]([H])(C([H])([H])C1([H])[H])[C@@]([H])(C([H])([H])[H])[C@]1([H])OC(=O)[C@@]([H])(C([H])([H])[H])[C@]2([H])O[C@@]([H])(C([H])([H])C2([H])[H])C([H])([H])[C@@]([H])(OC(=O)[C@]([H])(C([H])([H])C([H])([H])[H])[C@]2([H])O[C@@]([H])(C([H])([H])C2([H])[H])C1([H])[H])C([H])([H])C([H])([H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C34H59NO7/c1-7-10-23(35-6)18-25-12-15-29(38-25)21(4)32-20-27-14-17-31(40-27)28(9-3)34(37)41-24(11-8-2)19-26-13-16-30(39-26)22(5)33(36)42-32/h21-32,35H,7-20H2,1-6H3/t21-,22+,23-,24+,25+,26+,27+,28-,29-,30-,31-,32-/m1/s1

> <INCHI_KEY>
GWAGFXWDWGTKCD-MTQGVLOASA-N

> <FORMULA>
C34H59NO7

> <MOLECULAR_WEIGHT>
593.846

> <EXACT_MASS>
593.429153244

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
101

> <JCHEM_AVERAGE_POLARIZABILITY>
68.97244115190418

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1R,2R,5S,7S,10R,11S,14R,16S)-2-ethyl-11-methyl-14-[(1R)-1-[(2R,5S)-5-[(2R)-2-(methylamino)pentyl]oxolan-2-yl]ethyl]-5-propyl-4,13,19,20-tetraoxatricyclo[14.2.1.1^{7,10}]icosane-3,12-dione

> <ALOGPS_LOGP>
5.03

> <JCHEM_LOGP>
5.869248057666665

> <ALOGPS_LOGS>
-6.09

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_BASIC>
10.559221841350967

> <JCHEM_POLAR_SURFACE_AREA>
92.32000000000001

> <JCHEM_REFRACTIVITY>
161.99109999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
10

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
4.79e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2R,5S,7S,10R,11S,14R,16S)-2-ethyl-11-methyl-14-[(1R)-1-[(2R,5S)-5-[(2R)-2-(methylamino)pentyl]oxolan-2-yl]ethyl]-5-propyl-4,13,19,20-tetraoxatricyclo[14.2.1.1^{7,10}]icosane-3,12-dione

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

101104  0  0  0  0  0  0  0  0999 V2000
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  8 57  1  0
  9 58  1  1
 11 59  1  6
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 38 97  1  0
 38 98  1  0
 39 99  1  0
 39100  1  0
 39101  1  0
M  END

HEADER    PROTEIN                                 01-JUL-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   01-JUL-21         0                                  
HETATM    1  C   UNK     0      -6.857  -0.579  -3.300  0.00  0.00           C+0
HETATM    2  C   UNK     0      -5.659  -1.154  -2.581  0.00  0.00           C+0
HETATM    3  C   UNK     0      -5.663  -0.845  -1.121  0.00  0.00           C+0
HETATM    4  C   UNK     0      -5.645   0.643  -0.839  0.00  0.00           C+0
HETATM    5  C   UNK     0      -5.649   0.937   0.642  0.00  0.00           C+0
HETATM    6  C   UNK     0      -5.285  -0.242   1.513  0.00  0.00           C+0
HETATM    7  C   UNK     0      -5.424   0.241   2.940  0.00  0.00           C+0
HETATM    8  C   UNK     0      -3.979   0.247   3.476  0.00  0.00           C+0
HETATM    9  C   UNK     0      -3.411  -0.847   2.602  0.00  0.00           C+0
HETATM   10  O   UNK     0      -3.979  -0.569   1.372  0.00  0.00           O+0
HETATM   11  C   UNK     0      -1.929  -0.875   2.490  0.00  0.00           C+0
HETATM   12  C   UNK     0      -1.425  -2.059   3.295  0.00  0.00           C+0
HETATM   13  C   UNK     0      -1.285   0.366   3.033  0.00  0.00           C+0
HETATM   14  O   UNK     0      -1.619   0.586   4.254  0.00  0.00           O+0
HETATM   15  O   UNK     0      -0.469   1.175   2.388  0.00  0.00           O+0
HETATM   16  C   UNK     0       0.788   1.261   1.876  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.699   0.085   2.214  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.857  -0.048   3.730  0.00  0.00           C+0
HETATM   19  C   UNK     0       3.074   0.170   1.664  0.00  0.00           C+0
HETATM   20  C   UNK     0       3.810  -1.098   2.150  0.00  0.00           C+0
HETATM   21  C   UNK     0       4.813  -1.305   0.991  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.600  -0.072   0.185  0.00  0.00           C+0
HETATM   23  C   UNK     0       5.045  -0.058  -1.216  0.00  0.00           C+0
HETATM   24  C   UNK     0       6.476  -0.254  -1.488  0.00  0.00           C+0
HETATM   25  C   UNK     0       7.158  -1.500  -1.118  0.00  0.00           C+0
HETATM   26  C   UNK     0       6.677  -2.780  -1.718  0.00  0.00           C+0
HETATM   27  C   UNK     0       6.801  -2.876  -3.210  0.00  0.00           C+0
HETATM   28  N   UNK     0       6.824   0.128  -2.854  0.00  0.00           N+0
HETATM   29  C   UNK     0       6.558   1.586  -2.920  0.00  0.00           C+0
HETATM   30  O   UNK     0       3.178   0.062   0.275  0.00  0.00           O+0
HETATM   31  C   UNK     0       0.923   1.553   0.436  0.00  0.00           C+0
HETATM   32  C   UNK     0       0.016   2.477  -0.245  0.00  0.00           C+0
HETATM   33  C   UNK     0      -1.151   3.050   0.426  0.00  0.00           C+0
HETATM   34  C   UNK     0      -2.340   2.368  -0.300  0.00  0.00           C+0
HETATM   35  C   UNK     0      -1.719   2.282  -1.665  0.00  0.00           C+0
HETATM   36  O   UNK     0      -0.434   1.819  -1.433  0.00  0.00           O+0
HETATM   37  C   UNK     0      -2.436   1.415  -2.658  0.00  0.00           C+0
HETATM   38  C   UNK     0      -1.853   0.063  -2.782  0.00  0.00           C+0
HETATM   39  C   UNK     0      -1.784  -0.825  -1.619  0.00  0.00           C+0
HETATM   40  C   UNK     0      -3.919   1.497  -2.540  0.00  0.00           C+0
HETATM   41  O   UNK     0      -4.410   1.720  -3.723  0.00  0.00           O+0
HETATM   42  O   UNK     0      -4.687   1.379  -1.466  0.00  0.00           O+0
HETATM   43  H   UNK     0      -6.739  -0.814  -4.365  0.00  0.00           H+0
HETATM   44  H   UNK     0      -7.795  -1.046  -2.935  0.00  0.00           H+0
HETATM   45  H   UNK     0      -6.960   0.512  -3.148  0.00  0.00           H+0
HETATM   46  H   UNK     0      -4.714  -0.923  -3.076  0.00  0.00           H+0
HETATM   47  H   UNK     0      -5.773  -2.275  -2.669  0.00  0.00           H+0
HETATM   48  H   UNK     0      -4.892  -1.385  -0.586  0.00  0.00           H+0
HETATM   49  H   UNK     0      -6.643  -1.238  -0.703  0.00  0.00           H+0
HETATM   50  H   UNK     0      -6.715   0.950  -1.131  0.00  0.00           H+0
HETATM   51  H   UNK     0      -6.620   1.366   0.990  0.00  0.00           H+0
HETATM   52  H   UNK     0      -4.910   1.749   0.840  0.00  0.00           H+0
HETATM   53  H   UNK     0      -5.965  -1.105   1.312  0.00  0.00           H+0
HETATM   54  H   UNK     0      -5.870   1.240   3.027  0.00  0.00           H+0
HETATM   55  H   UNK     0      -6.055  -0.459   3.507  0.00  0.00           H+0
HETATM   56  H   UNK     0      -4.054  -0.022   4.545  0.00  0.00           H+0
HETATM   57  H   UNK     0      -3.589   1.246   3.260  0.00  0.00           H+0
HETATM   58  H   UNK     0      -3.848  -1.811   2.942  0.00  0.00           H+0
HETATM   59  H   UNK     0      -1.650  -1.055   1.431  0.00  0.00           H+0
HETATM   60  H   UNK     0      -0.336  -2.192   3.085  0.00  0.00           H+0
HETATM   61  H   UNK     0      -1.947  -2.979   2.983  0.00  0.00           H+0
HETATM   62  H   UNK     0      -1.635  -1.887   4.351  0.00  0.00           H+0
HETATM   63  H   UNK     0       1.301   2.128   2.423  0.00  0.00           H+0
HETATM   64  H   UNK     0       1.252  -0.876   1.872  0.00  0.00           H+0
HETATM   65  H   UNK     0       2.472  -0.990   3.862  0.00  0.00           H+0
HETATM   66  H   UNK     0       0.918  -0.276   4.239  0.00  0.00           H+0
HETATM   67  H   UNK     0       2.455   0.757   4.164  0.00  0.00           H+0
HETATM   68  H   UNK     0       3.660   1.012   2.034  0.00  0.00           H+0
HETATM   69  H   UNK     0       4.319  -0.918   3.103  0.00  0.00           H+0
HETATM   70  H   UNK     0       3.139  -1.971   2.125  0.00  0.00           H+0
HETATM   71  H   UNK     0       4.589  -2.240   0.467  0.00  0.00           H+0
HETATM   72  H   UNK     0       5.793  -1.343   1.515  0.00  0.00           H+0
HETATM   73  H   UNK     0       5.045   0.796   0.768  0.00  0.00           H+0
HETATM   74  H   UNK     0       4.750   0.922  -1.692  0.00  0.00           H+0
HETATM   75  H   UNK     0       4.432  -0.839  -1.765  0.00  0.00           H+0
HETATM   76  H   UNK     0       7.026   0.567  -0.870  0.00  0.00           H+0
HETATM   77  H   UNK     0       8.227  -1.385  -1.569  0.00  0.00           H+0
HETATM   78  H   UNK     0       7.426  -1.610  -0.035  0.00  0.00           H+0
HETATM   79  H   UNK     0       5.598  -3.014  -1.490  0.00  0.00           H+0
HETATM   80  H   UNK     0       7.236  -3.666  -1.304  0.00  0.00           H+0
HETATM   81  H   UNK     0       7.607  -2.201  -3.567  0.00  0.00           H+0
HETATM   82  H   UNK     0       5.891  -2.653  -3.776  0.00  0.00           H+0
HETATM   83  H   UNK     0       7.147  -3.902  -3.525  0.00  0.00           H+0
HETATM   84  H   UNK     0       6.189  -0.347  -3.547  0.00  0.00           H+0
HETATM   85  H   UNK     0       6.710   1.989  -1.913  0.00  0.00           H+0
HETATM   86  H   UNK     0       5.561   1.798  -3.334  0.00  0.00           H+0
HETATM   87  H   UNK     0       7.319   2.067  -3.577  0.00  0.00           H+0
HETATM   88  H   UNK     0       1.974   1.971   0.308  0.00  0.00           H+0
HETATM   89  H   UNK     0       0.999   0.547  -0.084  0.00  0.00           H+0
HETATM   90  H   UNK     0       0.589   3.357  -0.701  0.00  0.00           H+0
HETATM   91  H   UNK     0      -1.312   4.142   0.128  0.00  0.00           H+0
HETATM   92  H   UNK     0      -1.252   3.042   1.490  0.00  0.00           H+0
HETATM   93  H   UNK     0      -2.483   1.422   0.207  0.00  0.00           H+0
HETATM   94  H   UNK     0      -3.217   3.010  -0.268  0.00  0.00           H+0
HETATM   95  H   UNK     0      -1.604   3.322  -2.045  0.00  0.00           H+0
HETATM   96  H   UNK     0      -2.148   1.914  -3.659  0.00  0.00           H+0
HETATM   97  H   UNK     0      -0.804   0.184  -3.190  0.00  0.00           H+0
HETATM   98  H   UNK     0      -2.367  -0.505  -3.615  0.00  0.00           H+0
HETATM   99  H   UNK     0      -1.476  -1.846  -1.990  0.00  0.00           H+0
HETATM  100  H   UNK     0      -0.910  -0.507  -0.992  0.00  0.00           H+0
HETATM  101  H   UNK     0      -2.632  -0.854  -0.954  0.00  0.00           H+0
CONECT    1    2   43   44   45                                             
CONECT    2    1    3   46   47                                             
CONECT    3    2    4   48   49                                             
CONECT    4    3    5   42   50                                             
CONECT    5    4    6   51   52                                             
CONECT    6    5    7   10   53                                             
CONECT    7    6    8   54   55                                             
CONECT    8    7    9   56   57                                             
CONECT    9    8   10   11   58                                             
CONECT   10    9    6                                                       
CONECT   11    9   12   13   59                                             
CONECT   12   11   60   61   62                                             
CONECT   13   11   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16                                                       
CONECT   16   15   17   31   63                                             
CONECT   17   16   18   19   64                                             
CONECT   18   17   65   66   67                                             
CONECT   19   17   20   30   68                                             
CONECT   20   19   21   69   70                                             
CONECT   21   20   22   71   72                                             
CONECT   22   21   23   30   73                                             
CONECT   23   22   24   74   75                                             
CONECT   24   23   25   28   76                                             
CONECT   25   24   26   77   78                                             
CONECT   26   25   27   79   80                                             
CONECT   27   26   81   82   83                                             
CONECT   28   24   29   84                                                  
CONECT   29   28   85   86   87                                             
CONECT   30   22   19                                                       
CONECT   31   16   32   88   89                                             
CONECT   32   31   33   36   90                                             
CONECT   33   32   34   91   92                                             
CONECT   34   33   35   93   94                                             
CONECT   35   34   36   37   95                                             
CONECT   36   35   32                                                       
CONECT   37   35   38   40   96                                             
CONECT   38   37   39   97   98                                             
CONECT   39   38   99  100  101                                             
CONECT   40   37   41   42                                                  
CONECT   41   40                                                            
CONECT   42   40    4                                                       
CONECT   43    1                                                            
CONECT   44    1                                                            
CONECT   45    1                                                            
CONECT   46    2                                                            
CONECT   47    2                                                            
CONECT   48    3                                                            
CONECT   49    3                                                            
CONECT   50    4                                                            
CONECT   51    5                                                            
CONECT   52    5                                                            
CONECT   53    6                                                            
CONECT   54    7                                                            
CONECT   55    7                                                            
CONECT   56    8                                                            
CONECT   57    8                                                            
CONECT   58    9                                                            
CONECT   59   11                                                            
CONECT   60   12                                                            
CONECT   61   12                                                            
CONECT   62   12                                                            
CONECT   63   16                                                            
CONECT   64   17                                                            
CONECT   65   18                                                            
CONECT   66   18                                                            
CONECT   67   18                                                            
CONECT   68   19                                                            
CONECT   69   20                                                            
CONECT   70   20                                                            
CONECT   71   21                                                            
CONECT   72   21                                                            
CONECT   73   22                                                            
CONECT   74   23                                                            
CONECT   75   23                                                            
CONECT   76   24                                                            
CONECT   77   25                                                            
CONECT   78   25                                                            
CONECT   79   26                                                            
CONECT   80   26                                                            
CONECT   81   27                                                            
CONECT   82   27                                                            
CONECT   83   27                                                            
CONECT   84   28                                                            
CONECT   85   29                                                            
CONECT   86   29                                                            
CONECT   87   29                                                            
CONECT   88   31                                                            
CONECT   89   31                                                            
CONECT   90   32                                                            
CONECT   91   33                                                            
CONECT   92   33                                                            
CONECT   93   34                                                            
CONECT   94   34                                                            
CONECT   95   35                                                            
CONECT   96   37                                                            
CONECT   97   38                                                            
CONECT   98   38                                                            
CONECT   99   39                                                            
CONECT  100   39                                                            
CONECT  101   39                                                            
MASTER        0    0    0    0    0    0    0    0  101    0  208    0
END

RDKit          3D

101104  0  0  0  0  0  0  0  0999 V2000
   -6.8570   -0.5789   -3.3004 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6591   -1.1540   -2.5812 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6633   -0.8449   -1.1211 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6448    0.6429   -0.8389 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.6485    0.9367    0.6424 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2847   -0.2422    1.5131 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.4237    0.2413    2.9400 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9789    0.2471    3.4757 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4110   -0.8466    2.6020 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.9790   -0.5690    1.3719 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9293   -0.8747    2.4900 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4249   -2.0585    3.2948 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2848    0.3664    3.0326 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6188    0.5864    4.2536 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4687    1.1750    2.3882 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7881    1.2606    1.8759 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6987    0.0846    2.2137 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8565   -0.0475    3.7304 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0738    0.1697    1.6637 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8097   -1.0980    2.1503 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8128   -1.3050    0.9907 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5998   -0.0716    0.1850 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.0453   -0.0583   -1.2165 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4757   -0.2539   -1.4883 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.1579   -1.4996   -1.1177 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6774   -2.7801   -1.7177 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8015   -2.8760   -3.2099 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8244    0.1280   -2.8544 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.5583    1.5861   -2.9198 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1777    0.0618    0.2754 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9232    1.5526    0.4360 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0161    2.4773   -0.2449 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1512    3.0501    0.4258 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3402    2.3680   -0.2996 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7193    2.2822   -1.6646 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4338    1.8193   -1.4330 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4363    1.4145   -2.6577 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.8527    0.0633   -2.7817 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7835   -0.8250   -1.6190 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9192    1.4974   -2.5400 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4097    1.7200   -3.7232 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6872    1.3793   -1.4659 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7386   -0.8142   -4.3646 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7947   -1.0457   -2.9352 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9595    0.5119   -3.1481 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7136   -0.9228   -3.0758 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7733   -2.2750   -2.6691 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8919   -1.3849   -0.5864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6425   -1.2385   -0.7034 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7150    0.9503   -1.1315 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6201    1.3656    0.9903 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9101    1.7491    0.8396 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9648   -1.1046    1.3122 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8696    1.2400    3.0266 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0547   -0.4591    3.5074 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0538   -0.0221    4.5449 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5888    1.2458    3.2602 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8477   -1.8112    2.9416 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6501   -1.0551    1.4309 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3355   -2.1925    3.0849 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9474   -2.9789    2.9831 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6352   -1.8870    4.3513 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3009    2.1283    2.4228 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2522   -0.8759    1.8723 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4724   -0.9897    3.8619 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
De-N-methylpamamycin 593b	MeSH
De-N-methylpamamycin-593 b	MeSH

Chemical Formula

C₃₄H₅₉NO₇

Average Mass

593.8460 Da

Monoisotopic Mass

593.42915 Da

IUPAC Name

(1R,2R,5S,7S,10R,11S,14R,16S)-2-ethyl-11-methyl-14-[(1R)-1-[(2R,5S)-5-[(2R)-2-(methylamino)pentyl]oxolan-2-yl]ethyl]-5-propyl-4,13,19,20-tetraoxatricyclo[14.2.1.1^{7,10}]icosane-3,12-dione

Traditional Name

(1R,2R,5S,7S,10R,11S,14R,16S)-2-ethyl-11-methyl-14-[(1R)-1-[(2R,5S)-5-[(2R)-2-(methylamino)pentyl]oxolan-2-yl]ethyl]-5-propyl-4,13,19,20-tetraoxatricyclo[14.2.1.1^{7,10}]icosane-3,12-dione

CAS Registry Number

Not Available

SMILES

[H]N(C([H])([H])[H])[C@]([H])(C([H])([H])C([H])([H])C([H])([H])[H])C([H])([H])[C@@]1([H])O[C@]([H])(C([H])([H])C1([H])[H])[C@@]([H])(C([H])([H])[H])[C@]1([H])OC(=O)[C@@]([H])(C([H])([H])[H])[C@]2([H])O[C@@]([H])(C([H])([H])C2([H])[H])C([H])([H])[C@@]([H])(OC(=O)[C@]([H])(C([H])([H])C([H])([H])[H])[C@]2([H])O[C@@]([H])(C([H])([H])C2([H])[H])C1([H])[H])C([H])([H])C([H])([H])C([H])([H])[H]

InChI Identifier

InChI=1S/C34H59NO7/c1-7-10-23(35-6)18-25-12-15-29(38-25)21(4)32-20-27-14-17-31(40-27)28(9-3)34(37)41-24(11-8-2)19-26-13-16-30(39-26)22(5)33(36)42-32/h21-32,35H,7-20H2,1-6H3/t21-,22+,23-,24+,25+,26+,27+,28-,29-,30-,31-,32-/m1/s1

InChI Key

GWAGFXWDWGTKCD-MTQGVLOASA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Streptomyces alboniger	NPAtlas	10348051
Streptomyces alboniger IFO 12738	Bacteria	KNApSAcK

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.03	ALOGPS
logP	5.87	ChemAxon
logS	-6.1	ALOGPS
pKa (Strongest Basic)	10.56	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	92.32 Å²	ChemAxon
Rotatable Bond Count	10	ChemAxon
Refractivity	161.99 m³·mol⁻¹	ChemAxon
Polarizability	68.97 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

NPAtlas ID

NPA018208

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

8897529

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10722193

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Kozone I, Chikamoto N, Abe H, Natsume M: De-N-methylpamamycin-593A and B, new pamamycin derivatives isolated from Streptomyces alboniger. J Antibiot (Tokyo). 1999 Mar;52(3):329-31. doi: 10.7164/antibiotics.52.329. [PubMed:10348051 ]

Showing NP-Card for De-N-methylpamamycin-593B (NP0001664)

MOL for NP0001664 (De-N-methylpamamycin-593B)

3D MOL for NP0001664 (De-N-methylpamamycin-593B)

3D SDF for NP0001664 (De-N-methylpamamycin-593B)

3D-SDF for NP0001664 (De-N-methylpamamycin-593B)

PDB for NP0001664 (De-N-methylpamamycin-593B)

3D PDB for NP0001664 (De-N-methylpamamycin-593B)

SMILES for NP0001664 (De-N-methylpamamycin-593B)

INCHI for NP0001664 (De-N-methylpamamycin-593B)

Structure for NP0001664 (De-N-methylpamamycin-593B)

3D Structure for NP0001664 (De-N-methylpamamycin-593B)