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Record Information
Version1.0
Created at2020-09-23 01:56:57 UTC
Updated at2021-08-10 02:55:21 UTC
NP-MRD IDNP0001573
Secondary Accession NumbersNone
Natural Product Identification
Common NameRoridin E acetate
Provided ByNPAtlasNPAtlas Logo
Description Roridin E acetate is found in Myrothecium and Myrothecium verrucaria. It was first documented in 1999 (PMID: 10075777). Based on a literature review very few articles have been published on (1R)-1-[(1'R,2S,3'R,8'R,17'R,18'E,20'E,24'R,25'S)-5',13',25'-trimethyl-11',22'-dioxo-2',10',16',23'-tetraoxaspiro[oxirane-2,26'-tetracyclo[22.2.1.0³,⁸.0⁸,²⁵]Heptacosane]-4',12',18',20'-tetraen-17'-yl]ethyl acetate.
Structure
Data?1628564121
Synonyms
ValueSource
(1R)-1-[(1'r,2S,3'r,8'r,17'r,18'e,20'e,24'r,25's)-5',13',25'-Trimethyl-11',22'-dioxo-2',10',16',23'-tetraoxaspiro[oxirane-2,26'-tetracyclo[22.2.1.0,.0,]heptacosane]-4',12',18',20'-tetraen-17'-yl]ethyl acetic acidGenerator
Chemical FormulaC31H40O9
Average Mass556.6520 Da
Monoisotopic Mass556.26723 Da
IUPAC Name(1R)-1-[(1'R,2S,3'R,8'R,12'Z,17'R,18'Z,20'Z,24'R,25'S)-5',13',25'-trimethyl-11',22'-dioxo-2',10',16',23'-tetraoxaspiro[oxirane-2,26'-tetracyclo[22.2.1.0^{3,8}.0^{8,25}]heptacosane]-4',12',18',20'-tetraen-17'-yl]ethyl acetate
Traditional Name(1R)-1-[(1'R,2S,3'R,8'R,12'Z,17'R,18'Z,20'Z,24'R,25'S)-5',13',25'-trimethyl-11',22'-dioxo-2',10',16',23'-tetraoxaspiro[oxirane-2,26'-tetracyclo[22.2.1.0^{3,8}.0^{8,25}]heptacosane]-4',12',18',20'-tetraen-17'-yl]ethyl acetate
CAS Registry NumberNot Available
SMILES
[H]C1=C(C([H])([H])[H])C([H])([H])C([H])([H])[C@@]23C([H])([H])OC(=O)\C([H])=C(C([H])([H])[H])/C([H])([H])C([H])([H])O[C@]([H])(\C([H])=C(\[H])/C(/[H])=C([H])\C(=O)O[C@]4([H])C([H])([H])[C@@]([H])(O[C@]12[H])[C@]1(OC1([H])[H])[C@@]34C([H])([H])[H])[C@]([H])(OC(=O)C([H])([H])[H])C([H])([H])[H]
InChI Identifier
InChI=1S/C31H40O9/c1-19-10-12-30-17-36-28(34)15-20(2)11-13-35-23(21(3)38-22(4)32)8-6-7-9-27(33)40-24-16-26(39-25(30)14-19)31(18-37-31)29(24,30)5/h6-9,14-15,21,23-26H,10-13,16-18H2,1-5H3/b8-6-,9-7-,20-15-/t21-,23-,24-,25-,26-,29-,30-,31+/m1/s1
InChI KeyUMMRHXXIVGSHOW-HPQVGXGNSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
MyrotheciumNPAtlas
Myrothecium verrucariaFungi
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.72ALOGPS
logP3.71ChemAxon
logS-5ALOGPS
pKa (Strongest Acidic)17.6ChemAxon
pKa (Strongest Basic)-3.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area109.89 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity147.57 m³·mol⁻¹ChemAxon
Polarizability58.22 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA012196
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Isaka M, Punya J, Lertwerawat Y, Tanticharoen M, Thebtaranonth Y: Antimalarial activity of macrocyclic trichothecenes isolated from the fungus Myrothecium verrucaria. J Nat Prod. 1999 Feb;62(2):329-31. doi: 10.1021/np980323x. [PubMed:10075777 ]