Showing NP-Card for Rubiarbonone D (NP0001533)
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Version | 2.0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Created at | 2020-08-26 20:36:14 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Updated at | 2021-08-10 02:55:03 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
NP-MRD ID | NP0001533 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Secondary Accession Numbers | None | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Natural Product Identification | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Common Name | Rubiarbonone D | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Description | (1S,2S,5S,6S,8R,9S,10R,14S,19R,21S)-8,21-dihydroxy-2,5,10,14,18,18-hexamethyl-6-(propan-2-yl)pentacyclo[11.8.0.0²,¹⁰.0⁵,⁹.0¹⁴,¹⁹]Henicos-12-en-17-one belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. Rubiarbonone D is found in Rubia yunnanensis. Based on a literature review very few articles have been published on (1S,2S,5S,6S,8R,9S,10R,14S,19R,21S)-8,21-dihydroxy-2,5,10,14,18,18-hexamethyl-6-(propan-2-yl)pentacyclo[11.8.0.0²,¹⁰.0⁵,⁹.0¹⁴,¹⁹]Henicos-12-en-17-one. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Structure | MOL for NP0001533 (Rubiarbonone D)Mrv1652308262022362D 81 85 0 0 1 0 999 V2000 4.4095 -1.3189 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.1979 -1.0759 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 5.3816 -0.2717 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 6.0148 -0.8005 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 6.1403 0.0524 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 6.8991 -0.2716 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 6.9162 0.3329 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 6.0666 0.8741 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 6.8322 0.5668 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 6.6880 1.4167 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 5.9073 1.6836 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 7.4687 1.1499 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 7.8452 0.4158 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 8.2762 1.3188 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 7.5194 1.9733 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 6.5288 2.2262 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 7.3495 2.1428 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 6.8477 2.9871 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.8938 2.7530 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.2623 1.0579 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 5.7573 1.7179 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 6.0520 2.4884 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.5472 2.5157 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.1213 2.2433 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 4.8607 1.7785 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 4.4374 1.0704 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 4.4491 2.4935 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 4.0358 1.7911 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.9012 2.6050 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 3.4107 2.3295 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 3.6125 1.0830 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 3.2109 1.8036 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.1510 2.6265 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 3.8936 2.2669 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 2.5028 2.2270 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 2.7876 1.0955 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 3.1892 0.3749 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 2.3643 0.3874 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.7659 -0.3333 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.7533 -1.1582 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 3.5908 -0.3458 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.2968 -1.1167 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 3.8611 -1.1252 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 4.0141 0.3623 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 4.4157 -0.3583 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 4.7447 -1.1149 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0227 -0.9170 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.1969 -0.6235 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 4.8390 0.3498 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 5.6607 0.4235 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.5394 0.4000 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 1.9410 -0.3207 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1.3488 -0.8951 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.9284 -1.1456 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 2.5154 -0.9129 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.1161 -0.3082 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.7145 0.4125 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 0.6473 -0.9871 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 0.2912 -0.2956 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.5336 -0.2741 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.1475 -0.9943 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.1104 0.4250 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.9353 0.4376 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 0.3129 1.1332 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.4580 1.4271 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.1641 2.1980 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.2288 1.7210 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.7519 0.6562 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 0.4685 1.9434 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1.1348 1.4569 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.1928 2.3383 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 0.4204 2.7670 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.1378 1.1206 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 1.9627 1.1081 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.5611 1.8287 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.1802 2.3740 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.6529 2.6486 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 2.3860 1.8162 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 3.0941 1.3929 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 2.8093 2.5243 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 2.5952 3.3210 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 3 2 1 1 0 0 0 3 4 1 6 0 0 0 3 5 1 0 0 0 0 5 6 1 0 0 0 0 5 7 1 0 0 0 0 5 8 1 0 0 0 0 8 9 1 1 0 0 0 8 10 1 6 0 0 0 10 11 1 0 0 0 0 10 12 1 0 0 0 0 12 13 1 0 0 0 0 12 14 1 0 0 0 0 12 15 1 0 0 0 0 10 16 1 0 0 0 0 16 17 1 0 0 0 0 16 18 1 0 0 0 0 16 19 1 0 0 0 0 8 20 1 0 0 0 0 20 21 1 6 0 0 0 21 22 1 0 0 0 0 21 23 1 0 0 0 0 21 24 1 0 0 0 0 20 25 1 0 0 0 0 25 26 1 0 0 0 0 25 27 1 0 0 0 0 25 28 1 0 0 0 0 28 29 1 0 0 0 0 28 30 1 0 0 0 0 28 31 1 0 0 0 0 31 32 1 1 0 0 0 32 33 1 0 0 0 0 32 34 1 0 0 0 0 32 35 1 0 0 0 0 31 36 1 0 0 0 0 36 37 1 6 0 0 0 36 38 1 0 0 0 0 38 39 2 0 0 0 0 39 40 1 0 0 0 0 39 41 1 0 0 0 0 41 42 1 0 0 0 0 41 43 1 0 0 0 0 41 44 1 0 0 0 0 31 44 1 0 0 0 0 44 45 1 6 0 0 0 45 46 1 0 0 0 0 45 47 1 0 0 0 0 45 48 1 0 0 0 0 44 49 1 0 0 0 0 3 49 1 0 0 0 0 20 49 1 0 0 0 0 49 50 1 1 0 0 0 38 51 1 0 0 0 0 51 52 1 6 0 0 0 52 53 1 0 0 0 0 52 54 1 0 0 0 0 52 55 1 0 0 0 0 51 56 1 0 0 0 0 56 57 1 0 0 0 0 56 58 1 0 0 0 0 56 59 1 0 0 0 0 59 60 1 0 0 0 0 59 61 1 0 0 0 0 59 62 1 0 0 0 0 62 63 2 0 0 0 0 62 64 1 0 0 0 0 64 65 1 0 0 0 0 65 66 1 0 0 0 0 65 67 1 0 0 0 0 65 68 1 0 0 0 0 64 69 1 0 0 0 0 69 70 1 0 0 0 0 69 71 1 0 0 0 0 69 72 1 0 0 0 0 64 73 1 0 0 0 0 51 73 1 0 0 0 0 73 74 1 1 0 0 0 73 75 1 0 0 0 0 75 76 1 0 0 0 0 75 77 1 0 0 0 0 75 78 1 0 0 0 0 36 78 1 0 0 0 0 78 79 1 1 0 0 0 78 80 1 6 0 0 0 80 81 1 0 0 0 0 M END 3D MOL for NP0001533 (Rubiarbonone D)NP0001533 RDKit 3D 81 85 0 0 0 0 0 0 0 0999 V2000 6.9384 -0.1341 0.0490 C 0 0 0 0 0 0 0 0 0 0 0 0 5.7351 0.8207 -0.0873 C 0 0 0 0 0 0 0 0 0 0 0 0 5.9136 1.8547 0.9725 C 0 0 0 0 0 0 0 0 0 0 0 0 4.5299 -0.0217 0.0092 C 0 0 2 0 0 0 0 0 0 0 0 0 4.6160 -1.0303 -1.1465 C 0 0 0 0 0 0 0 0 0 0 0 0 3.2069 -1.1428 -1.7258 C 0 0 1 0 0 0 0 0 0 0 0 0 3.0025 -2.5317 -1.8983 O 0 0 0 0 0 0 0 0 0 0 0 0 2.4172 -0.6030 -0.5903 C 0 0 1 0 0 0 0 0 0 0 0 0 3.2138 0.6191 -0.2163 C 0 0 2 0 0 0 0 0 0 0 0 0 3.3465 1.6197 -1.3339 C 0 0 0 0 0 0 0 0 0 0 0 0 2.5975 1.3032 0.9492 C 0 0 0 0 0 0 0 0 0 0 0 0 1.1019 1.4203 0.8745 C 0 0 0 0 0 0 0 0 0 0 0 0 0.4208 0.0680 0.6012 C 0 0 1 0 0 0 0 0 0 0 0 0 0.7943 -0.7905 1.7632 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.0434 0.2951 0.5556 C 0 0 1 0 0 0 0 0 0 0 0 0 -1.7584 -0.4998 -0.4524 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.1422 -1.4354 -1.1311 C 0 0 0 0 0 0 0 0 0 0 0 0 0.3049 -1.7767 -0.9532 C 0 0 0 0 0 0 0 0 0 0 0 0 0.9835 -0.4420 -0.7207 C 0 0 2 0 0 0 0 0 0 0 0 0 0.5908 0.4220 -1.8795 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.1949 -0.2017 -0.6633 C 0 0 1 0 0 0 0 0 0 0 0 0 -3.3357 1.2686 -0.9733 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.8048 -0.9584 -1.8234 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.2470 -0.5175 -1.9274 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.7868 0.0462 -0.6843 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.6089 0.9242 -0.7287 O 0 0 0 0 0 0 0 0 0 0 0 0 -5.3246 -0.4606 0.6299 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.0016 -1.8284 0.8073 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.8724 0.4165 1.7160 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.8369 -0.5845 0.6481 C 0 0 2 0 0 0 0 0 0 0 0 0 -3.2421 0.1680 1.7770 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.7553 0.1388 1.8754 C 0 0 2 0 0 0 0 0 0 0 0 0 -1.4026 1.2248 2.6741 O 0 0 0 0 0 0 0 0 0 0 0 0 7.8394 0.4763 -0.0792 H 0 0 0 0 0 0 0 0 0 0 0 0 6.8597 -0.9611 -0.6821 H 0 0 0 0 0 0 0 0 0 0 0 0 6.9153 -0.4798 1.1048 H 0 0 0 0 0 0 0 0 0 0 0 0 5.8589 1.2432 -1.1284 H 0 0 0 0 0 0 0 0 0 0 0 0 5.9784 2.8630 0.4656 H 0 0 0 0 0 0 0 0 0 0 0 0 5.1524 1.8752 1.7484 H 0 0 0 0 0 0 0 0 0 0 0 0 6.9033 1.7813 1.5151 H 0 0 0 0 0 0 0 0 0 0 0 0 4.5620 -0.5716 0.9890 H 0 0 0 0 0 0 0 0 0 0 0 0 5.2543 -0.6529 -1.9582 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0102 -1.9865 -0.7845 H 0 0 0 0 0 0 0 0 0 0 0 0 3.1087 -0.6909 -2.6947 H 0 0 0 0 0 0 0 0 0 0 0 0 2.8022 -2.9735 -1.0367 H 0 0 0 0 0 0 0 0 0 0 0 0 2.6221 -1.3687 0.2215 H 0 0 0 0 0 0 0 0 0 0 0 0 4.1493 2.3432 -0.9933 H 0 0 0 0 0 0 0 0 0 0 0 0 2.4484 2.2892 -1.4216 H 0 0 0 0 0 0 0 0 0 0 0 0 3.6955 1.2154 -2.2776 H 0 0 0 0 0 0 0 0 0 0 0 0 2.9561 2.3792 0.9290 H 0 0 0 0 0 0 0 0 0 0 0 0 2.9533 0.9350 1.9419 H 0 0 0 0 0 0 0 0 0 0 0 0 0.7451 2.2085 0.2158 H 0 0 0 0 0 0 0 0 0 0 0 0 0.7557 1.6940 1.9113 H 0 0 0 0 0 0 0 0 0 0 0 0 0.4597 -1.8198 1.7302 H 0 0 0 0 0 0 0 0 0 0 0 0 0.4075 -0.2516 2.6828 H 0 0 0 0 0 0 0 0 0 0 0 0 1.8942 -0.8018 1.9992 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.2381 1.3780 0.2701 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.6691 -2.0458 -1.8959 H 0 0 0 0 0 0 0 0 0 0 0 0 0.7020 -2.1860 -1.9110 H 0 0 0 0 0 0 0 0 0 0 0 0 0.4904 -2.5150 -0.1849 H 0 0 0 0 0 0 0 0 0 0 0 0 0.2191 1.4230 -1.5902 H 0 0 0 0 0 0 0 0 0 0 0 0 1.4423 0.4545 -2.5897 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.2319 -0.0163 -2.5107 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.0928 1.4535 -1.7912 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6452 1.8821 -0.1316 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.3882 1.7071 -1.3817 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.2909 -0.6141 -2.7435 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6977 -2.0438 -1.7506 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.4019 0.2140 -2.7452 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.8724 -1.4053 -2.1900 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.0722 -1.6650 1.0363 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.9607 -2.3297 -0.2031 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.5157 -2.4256 1.5829 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6677 1.5043 1.5324 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.9980 0.3438 1.6353 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6321 0.0974 2.7307 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.5922 -1.6709 0.7987 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6701 1.1923 1.7863 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6354 -0.3050 2.7272 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.4791 -0.8442 2.2957 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.7906 2.0203 2.2605 H 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 2 3 1 0 2 4 1 0 4 5 1 0 5 6 1 0 6 7 1 0 6 8 1 0 8 9 1 0 9 10 1 6 9 11 1 0 11 12 1 0 12 13 1 0 13 14 1 1 13 15 1 0 15 16 1 0 16 17 2 0 17 18 1 0 18 19 1 0 19 20 1 6 16 21 1 0 21 22 1 6 21 23 1 0 23 24 1 0 24 25 1 0 25 26 2 0 25 27 1 0 27 28 1 0 27 29 1 0 27 30 1 0 30 31 1 0 31 32 1 0 32 33 1 0 9 4 1 0 19 13 1 0 30 21 1 0 19 8 1 0 32 15 1 0 1 34 1 0 1 35 1 0 1 36 1 0 2 37 1 0 3 38 1 0 3 39 1 0 3 40 1 0 4 41 1 1 5 42 1 0 5 43 1 0 6 44 1 6 7 45 1 0 8 46 1 1 10 47 1 0 10 48 1 0 10 49 1 0 11 50 1 0 11 51 1 0 12 52 1 0 12 53 1 0 14 54 1 0 14 55 1 0 14 56 1 0 15 57 1 6 17 58 1 0 18 59 1 0 18 60 1 0 20 61 1 0 20 62 1 0 20 63 1 0 22 64 1 0 22 65 1 0 22 66 1 0 23 67 1 0 23 68 1 0 24 69 1 0 24 70 1 0 28 71 1 0 28 72 1 0 28 73 1 0 29 74 1 0 29 75 1 0 29 76 1 0 30 77 1 1 31 78 1 0 31 79 1 0 32 80 1 1 33 81 1 0 M END 3D SDF for NP0001533 (Rubiarbonone D)Mrv1652308262022362D 81 85 0 0 1 0 999 V2000 4.4095 -1.3189 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.1979 -1.0759 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 5.3816 -0.2717 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 6.0148 -0.8005 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 6.1403 0.0524 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 6.8991 -0.2716 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 6.9162 0.3329 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 6.0666 0.8741 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 6.8322 0.5668 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 6.6880 1.4167 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 5.9073 1.6836 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 7.4687 1.1499 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 7.8452 0.4158 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 8.2762 1.3188 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 7.5194 1.9733 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 6.5288 2.2262 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 7.3495 2.1428 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 6.8477 2.9871 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.8938 2.7530 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.2623 1.0579 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 5.7573 1.7179 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 6.0520 2.4884 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.5472 2.5157 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.1213 2.2433 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 4.8607 1.7785 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 4.4374 1.0704 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 4.4491 2.4935 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 4.0358 1.7911 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.9012 2.6050 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 3.4107 2.3295 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 3.6125 1.0830 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 3.2109 1.8036 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.1510 2.6265 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 3.8936 2.2669 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 2.5028 2.2270 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 2.7876 1.0955 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 3.1892 0.3749 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 2.3643 0.3874 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.7659 -0.3333 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.7533 -1.1582 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 3.5908 -0.3458 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.2968 -1.1167 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 3.8611 -1.1252 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 4.0141 0.3623 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 4.4157 -0.3583 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 4.7447 -1.1149 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0227 -0.9170 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 5.1969 -0.6235 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 4.8390 0.3498 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 5.6607 0.4235 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.5394 0.4000 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 1.9410 -0.3207 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1.3488 -0.8951 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.9284 -1.1456 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 2.5154 -0.9129 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.1161 -0.3082 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.7145 0.4125 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 0.6473 -0.9871 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 0.2912 -0.2956 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.5336 -0.2741 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.1475 -0.9943 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.1104 0.4250 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.9353 0.4376 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 0.3129 1.1332 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.4580 1.4271 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.1641 2.1980 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.2288 1.7210 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.7519 0.6562 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 0.4685 1.9434 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1.1348 1.4569 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.1928 2.3383 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 0.4204 2.7670 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.1378 1.1206 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 1.9627 1.1081 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.5611 1.8287 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.1802 2.3740 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.6529 2.6486 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 2.3860 1.8162 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 3.0941 1.3929 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 2.8093 2.5243 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 2.5952 3.3210 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 3 2 1 1 0 0 0 3 4 1 6 0 0 0 3 5 1 0 0 0 0 5 6 1 0 0 0 0 5 7 1 0 0 0 0 5 8 1 0 0 0 0 8 9 1 1 0 0 0 8 10 1 6 0 0 0 10 11 1 0 0 0 0 10 12 1 0 0 0 0 12 13 1 0 0 0 0 12 14 1 0 0 0 0 12 15 1 0 0 0 0 10 16 1 0 0 0 0 16 17 1 0 0 0 0 16 18 1 0 0 0 0 16 19 1 0 0 0 0 8 20 1 0 0 0 0 20 21 1 6 0 0 0 21 22 1 0 0 0 0 21 23 1 0 0 0 0 21 24 1 0 0 0 0 20 25 1 0 0 0 0 25 26 1 0 0 0 0 25 27 1 0 0 0 0 25 28 1 0 0 0 0 28 29 1 0 0 0 0 28 30 1 0 0 0 0 28 31 1 0 0 0 0 31 32 1 1 0 0 0 32 33 1 0 0 0 0 32 34 1 0 0 0 0 32 35 1 0 0 0 0 31 36 1 0 0 0 0 36 37 1 6 0 0 0 36 38 1 0 0 0 0 38 39 2 0 0 0 0 39 40 1 0 0 0 0 39 41 1 0 0 0 0 41 42 1 0 0 0 0 41 43 1 0 0 0 0 41 44 1 0 0 0 0 31 44 1 0 0 0 0 44 45 1 6 0 0 0 45 46 1 0 0 0 0 45 47 1 0 0 0 0 45 48 1 0 0 0 0 44 49 1 0 0 0 0 3 49 1 0 0 0 0 20 49 1 0 0 0 0 49 50 1 1 0 0 0 38 51 1 0 0 0 0 51 52 1 6 0 0 0 52 53 1 0 0 0 0 52 54 1 0 0 0 0 52 55 1 0 0 0 0 51 56 1 0 0 0 0 56 57 1 0 0 0 0 56 58 1 0 0 0 0 56 59 1 0 0 0 0 59 60 1 0 0 0 0 59 61 1 0 0 0 0 59 62 1 0 0 0 0 62 63 2 0 0 0 0 62 64 1 0 0 0 0 64 65 1 0 0 0 0 65 66 1 0 0 0 0 65 67 1 0 0 0 0 65 68 1 0 0 0 0 64 69 1 0 0 0 0 69 70 1 0 0 0 0 69 71 1 0 0 0 0 69 72 1 0 0 0 0 64 73 1 0 0 0 0 51 73 1 0 0 0 0 73 74 1 1 0 0 0 73 75 1 0 0 0 0 75 76 1 0 0 0 0 75 77 1 0 0 0 0 75 78 1 0 0 0 0 36 78 1 0 0 0 0 78 79 1 1 0 0 0 78 80 1 6 0 0 0 80 81 1 0 0 0 0 M END > <DATABASE_ID> NP0001533 > <DATABASE_NAME> NP-MRD > <SMILES> [H]O[C@]1([H])C([H])([H])[C@@]([H])(C([H])(C([H])([H])[H])C([H])([H])[H])[C@]2(C([H])([H])[H])C([H])([H])C([H])([H])[C@@]3(C([H])([H])[H])[C@@]4([H])C(=C([H])C([H])([H])[C@]3(C([H])([H])[H])[C@@]12[H])[C@@]1(C([H])([H])[H])C([H])([H])C([H])([H])C(=O)C(C([H])([H])[H])(C([H])([H])[H])[C@]1([H])C([H])([H])[C@]4([H])O[H] > <INCHI_IDENTIFIER> InChI=1S/C30H48O3/c1-17(2)19-15-21(32)25-28(19,6)13-14-29(7)24-18(9-12-30(25,29)8)27(5)11-10-23(33)26(3,4)22(27)16-20(24)31/h9,17,19-22,24-25,31-32H,10-16H2,1-8H3/t19-,20-,21+,22-,24-,25-,27+,28-,29-,30+/m0/s1 > <INCHI_KEY> GJCFGYOIXLZELH-LHASHULKSA-N > <FORMULA> C30H48O3 > <MOLECULAR_WEIGHT> 456.711 > <EXACT_MASS> 456.360345406 > <JCHEM_ACCEPTOR_COUNT> 3 > <JCHEM_ATOM_COUNT> 81 > <JCHEM_AVERAGE_POLARIZABILITY> 55.48166604564044 > <JCHEM_BIOAVAILABILITY> 1 > <JCHEM_DONOR_COUNT> 2 > <JCHEM_FORMAL_CHARGE> 0 > <JCHEM_GHOSE_FILTER> 0 > <JCHEM_IUPAC> (1S,2S,5S,6S,8R,9S,10R,14S,19R,21S)-8,21-dihydroxy-2,5,10,14,18,18-hexamethyl-6-(propan-2-yl)pentacyclo[11.8.0.0^{2,10}.0^{5,9}.0^{14,19}]henicos-12-en-17-one > <ALOGPS_LOGP> 5.38 > <JCHEM_LOGP> 5.336110922333333 > <ALOGPS_LOGS> -5.08 > <JCHEM_MDDR_LIKE_RULE> 0 > <JCHEM_NUMBER_OF_RINGS> 5 > <JCHEM_PHYSIOLOGICAL_CHARGE> 0 > <JCHEM_PKA_STRONGEST_ACIDIC> 19.6894536248437 > <JCHEM_PKA_STRONGEST_BASIC> -0.14492419847611726 > <JCHEM_POLAR_SURFACE_AREA> 57.53 > <JCHEM_REFRACTIVITY> 134.3435 > <JCHEM_ROTATABLE_BOND_COUNT> 1 > <JCHEM_RULE_OF_FIVE> 0 > <ALOGPS_SOLUBILITY> 3.83e-03 g/l > <JCHEM_TRADITIONAL_IUPAC> (1S,2S,5S,6S,8R,9S,10R,14S,19R,21S)-8,21-dihydroxy-6-isopropyl-2,5,10,14,18,18-hexamethylpentacyclo[11.8.0.0^{2,10}.0^{5,9}.0^{14,19}]henicos-12-en-17-one > <JCHEM_VEBER_RULE> 0 $$$$ 3D-SDF for NP0001533 (Rubiarbonone D)NP0001533 RDKit 3D 81 85 0 0 0 0 0 0 0 0999 V2000 6.9384 -0.1341 0.0490 C 0 0 0 0 0 0 0 0 0 0 0 0 5.7351 0.8207 -0.0873 C 0 0 0 0 0 0 0 0 0 0 0 0 5.9136 1.8547 0.9725 C 0 0 0 0 0 0 0 0 0 0 0 0 4.5299 -0.0217 0.0092 C 0 0 2 0 0 0 0 0 0 0 0 0 4.6160 -1.0303 -1.1465 C 0 0 0 0 0 0 0 0 0 0 0 0 3.2069 -1.1428 -1.7258 C 0 0 1 0 0 0 0 0 0 0 0 0 3.0025 -2.5317 -1.8983 O 0 0 0 0 0 0 0 0 0 0 0 0 2.4172 -0.6030 -0.5903 C 0 0 1 0 0 0 0 0 0 0 0 0 3.2138 0.6191 -0.2163 C 0 0 2 0 0 0 0 0 0 0 0 0 3.3465 1.6197 -1.3339 C 0 0 0 0 0 0 0 0 0 0 0 0 2.5975 1.3032 0.9492 C 0 0 0 0 0 0 0 0 0 0 0 0 1.1019 1.4203 0.8745 C 0 0 0 0 0 0 0 0 0 0 0 0 0.4208 0.0680 0.6012 C 0 0 1 0 0 0 0 0 0 0 0 0 0.7943 -0.7905 1.7632 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.0434 0.2951 0.5556 C 0 0 1 0 0 0 0 0 0 0 0 0 -1.7584 -0.4998 -0.4524 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.1422 -1.4354 -1.1311 C 0 0 0 0 0 0 0 0 0 0 0 0 0.3049 -1.7767 -0.9532 C 0 0 0 0 0 0 0 0 0 0 0 0 0.9835 -0.4420 -0.7207 C 0 0 2 0 0 0 0 0 0 0 0 0 0.5908 0.4220 -1.8795 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.1949 -0.2017 -0.6633 C 0 0 1 0 0 0 0 0 0 0 0 0 -3.3357 1.2686 -0.9733 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.8048 -0.9584 -1.8234 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.2470 -0.5175 -1.9274 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.7868 0.0462 -0.6843 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.6089 0.9242 -0.7287 O 0 0 0 0 0 0 0 0 0 0 0 0 -5.3246 -0.4606 0.6299 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.0016 -1.8284 0.8073 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.8724 0.4165 1.7160 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.8369 -0.5845 0.6481 C 0 0 2 0 0 0 0 0 0 0 0 0 -3.2421 0.1680 1.7770 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.7553 0.1388 1.8754 C 0 0 2 0 0 0 0 0 0 0 0 0 -1.4026 1.2248 2.6741 O 0 0 0 0 0 0 0 0 0 0 0 0 7.8394 0.4763 -0.0792 H 0 0 0 0 0 0 0 0 0 0 0 0 6.8597 -0.9611 -0.6821 H 0 0 0 0 0 0 0 0 0 0 0 0 6.9153 -0.4798 1.1048 H 0 0 0 0 0 0 0 0 0 0 0 0 5.8589 1.2432 -1.1284 H 0 0 0 0 0 0 0 0 0 0 0 0 5.9784 2.8630 0.4656 H 0 0 0 0 0 0 0 0 0 0 0 0 5.1524 1.8752 1.7484 H 0 0 0 0 0 0 0 0 0 0 0 0 6.9033 1.7813 1.5151 H 0 0 0 0 0 0 0 0 0 0 0 0 4.5620 -0.5716 0.9890 H 0 0 0 0 0 0 0 0 0 0 0 0 5.2543 -0.6529 -1.9582 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0102 -1.9865 -0.7845 H 0 0 0 0 0 0 0 0 0 0 0 0 3.1087 -0.6909 -2.6947 H 0 0 0 0 0 0 0 0 0 0 0 0 2.8022 -2.9735 -1.0367 H 0 0 0 0 0 0 0 0 0 0 0 0 2.6221 -1.3687 0.2215 H 0 0 0 0 0 0 0 0 0 0 0 0 4.1493 2.3432 -0.9933 H 0 0 0 0 0 0 0 0 0 0 0 0 2.4484 2.2892 -1.4216 H 0 0 0 0 0 0 0 0 0 0 0 0 3.6955 1.2154 -2.2776 H 0 0 0 0 0 0 0 0 0 0 0 0 2.9561 2.3792 0.9290 H 0 0 0 0 0 0 0 0 0 0 0 0 2.9533 0.9350 1.9419 H 0 0 0 0 0 0 0 0 0 0 0 0 0.7451 2.2085 0.2158 H 0 0 0 0 0 0 0 0 0 0 0 0 0.7557 1.6940 1.9113 H 0 0 0 0 0 0 0 0 0 0 0 0 0.4597 -1.8198 1.7302 H 0 0 0 0 0 0 0 0 0 0 0 0 0.4075 -0.2516 2.6828 H 0 0 0 0 0 0 0 0 0 0 0 0 1.8942 -0.8018 1.9992 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.2381 1.3780 0.2701 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.6691 -2.0458 -1.8959 H 0 0 0 0 0 0 0 0 0 0 0 0 0.7020 -2.1860 -1.9110 H 0 0 0 0 0 0 0 0 0 0 0 0 0.4904 -2.5150 -0.1849 H 0 0 0 0 0 0 0 0 0 0 0 0 0.2191 1.4230 -1.5902 H 0 0 0 0 0 0 0 0 0 0 0 0 1.4423 0.4545 -2.5897 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.2319 -0.0163 -2.5107 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.0928 1.4535 -1.7912 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6452 1.8821 -0.1316 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.3882 1.7071 -1.3817 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.2909 -0.6141 -2.7435 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6977 -2.0438 -1.7506 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.4019 0.2140 -2.7452 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.8724 -1.4053 -2.1900 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.0722 -1.6650 1.0363 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.9607 -2.3297 -0.2031 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.5157 -2.4256 1.5829 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6677 1.5043 1.5324 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.9980 0.3438 1.6353 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6321 0.0974 2.7307 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.5922 -1.6709 0.7987 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6701 1.1923 1.7863 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6354 -0.3050 2.7272 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.4791 -0.8442 2.2957 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.7906 2.0203 2.2605 H 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 2 3 1 0 2 4 1 0 4 5 1 0 5 6 1 0 6 7 1 0 6 8 1 0 8 9 1 0 9 10 1 6 9 11 1 0 11 12 1 0 12 13 1 0 13 14 1 1 13 15 1 0 15 16 1 0 16 17 2 0 17 18 1 0 18 19 1 0 19 20 1 6 16 21 1 0 21 22 1 6 21 23 1 0 23 24 1 0 24 25 1 0 25 26 2 0 25 27 1 0 27 28 1 0 27 29 1 0 27 30 1 0 30 31 1 0 31 32 1 0 32 33 1 0 9 4 1 0 19 13 1 0 30 21 1 0 19 8 1 0 32 15 1 0 1 34 1 0 1 35 1 0 1 36 1 0 2 37 1 0 3 38 1 0 3 39 1 0 3 40 1 0 4 41 1 1 5 42 1 0 5 43 1 0 6 44 1 6 7 45 1 0 8 46 1 1 10 47 1 0 10 48 1 0 10 49 1 0 11 50 1 0 11 51 1 0 12 52 1 0 12 53 1 0 14 54 1 0 14 55 1 0 14 56 1 0 15 57 1 6 17 58 1 0 18 59 1 0 18 60 1 0 20 61 1 0 20 62 1 0 20 63 1 0 22 64 1 0 22 65 1 0 22 66 1 0 23 67 1 0 23 68 1 0 24 69 1 0 24 70 1 0 28 71 1 0 28 72 1 0 28 73 1 0 29 74 1 0 29 75 1 0 29 76 1 0 30 77 1 1 31 78 1 0 31 79 1 0 32 80 1 1 33 81 1 0 M END PDB for NP0001533 (Rubiarbonone D)HEADER PROTEIN 26-AUG-20 NONE TITLE NULL COMPND NULL SOURCE NULL KEYWDS NULL EXPDTA NULL AUTHOR Marvin REVDAT 1 26-AUG-20 0 HETATM 1 H UNK 0 8.231 -2.462 0.000 0.00 0.00 H+0 HETATM 2 O UNK 0 9.703 -2.008 0.000 0.00 0.00 O+0 HETATM 3 C UNK 0 10.046 -0.507 0.000 0.00 0.00 C+0 HETATM 4 H UNK 0 11.228 -1.494 0.000 0.00 0.00 H+0 HETATM 5 C UNK 0 11.462 0.098 0.000 0.00 0.00 C+0 HETATM 6 H UNK 0 12.878 -0.507 0.000 0.00 0.00 H+0 HETATM 7 H UNK 0 12.910 0.621 0.000 0.00 0.00 H+0 HETATM 8 C UNK 0 11.324 1.632 0.000 0.00 0.00 C+0 HETATM 9 H UNK 0 12.753 1.058 0.000 0.00 0.00 H+0 HETATM 10 C UNK 0 12.484 2.645 0.000 0.00 0.00 C+0 HETATM 11 H UNK 0 11.027 3.143 0.000 0.00 0.00 H+0 HETATM 12 C UNK 0 13.941 2.146 0.000 0.00 0.00 C+0 HETATM 13 H UNK 0 14.644 0.776 0.000 0.00 0.00 H+0 HETATM 14 H UNK 0 15.449 2.462 0.000 0.00 0.00 H+0 HETATM 15 H UNK 0 14.036 3.684 0.000 0.00 0.00 H+0 HETATM 16 C UNK 0 12.187 4.156 0.000 0.00 0.00 C+0 HETATM 17 H UNK 0 13.719 4.000 0.000 0.00 0.00 H+0 HETATM 18 H UNK 0 12.782 5.576 0.000 0.00 0.00 H+0 HETATM 19 H UNK 0 11.002 5.139 0.000 0.00 0.00 H+0 HETATM 20 C UNK 0 9.823 1.975 0.000 0.00 0.00 C+0 HETATM 21 C UNK 0 10.747 3.207 0.000 0.00 0.00 C+0 HETATM 22 H UNK 0 11.297 4.645 0.000 0.00 0.00 H+0 HETATM 23 H UNK 0 10.355 4.696 0.000 0.00 0.00 H+0 HETATM 24 H UNK 0 9.560 4.187 0.000 0.00 0.00 H+0 HETATM 25 C UNK 0 9.073 3.320 0.000 0.00 0.00 C+0 HETATM 26 H UNK 0 8.283 1.998 0.000 0.00 0.00 H+0 HETATM 27 H UNK 0 8.305 4.655 0.000 0.00 0.00 H+0 HETATM 28 C UNK 0 7.534 3.343 0.000 0.00 0.00 C+0 HETATM 29 H UNK 0 7.282 4.863 0.000 0.00 0.00 H+0 HETATM 30 H UNK 0 6.367 4.348 0.000 0.00 0.00 H+0 HETATM 31 C UNK 0 6.743 2.022 0.000 0.00 0.00 C+0 HETATM 32 C UNK 0 5.994 3.367 0.000 0.00 0.00 C+0 HETATM 33 H UNK 0 5.882 4.903 0.000 0.00 0.00 H+0 HETATM 34 H UNK 0 7.268 4.232 0.000 0.00 0.00 H+0 HETATM 35 H UNK 0 4.672 4.157 0.000 0.00 0.00 H+0 HETATM 36 C UNK 0 5.204 2.045 0.000 0.00 0.00 C+0 HETATM 37 H UNK 0 5.953 0.700 0.000 0.00 0.00 H+0 HETATM 38 C UNK 0 4.413 0.723 0.000 0.00 0.00 C+0 HETATM 39 C UNK 0 5.163 -0.622 0.000 0.00 0.00 C+0 HETATM 40 H UNK 0 5.140 -2.162 0.000 0.00 0.00 H+0 HETATM 41 C UNK 0 6.703 -0.645 0.000 0.00 0.00 C+0 HETATM 42 H UNK 0 6.154 -2.084 0.000 0.00 0.00 H+0 HETATM 43 H UNK 0 7.207 -2.100 0.000 0.00 0.00 H+0 HETATM 44 C UNK 0 7.493 0.676 0.000 0.00 0.00 C+0 HETATM 45 C UNK 0 8.243 -0.669 0.000 0.00 0.00 C+0 HETATM 46 H UNK 0 8.857 -2.081 0.000 0.00 0.00 H+0 HETATM 47 H UNK 0 9.376 -1.712 0.000 0.00 0.00 H+0 HETATM 48 H UNK 0 9.701 -1.164 0.000 0.00 0.00 H+0 HETATM 49 C UNK 0 9.033 0.653 0.000 0.00 0.00 C+0 HETATM 50 H UNK 0 10.567 0.791 0.000 0.00 0.00 H+0 HETATM 51 C UNK 0 2.874 0.747 0.000 0.00 0.00 C+0 HETATM 52 C UNK 0 3.623 -0.599 0.000 0.00 0.00 C+0 HETATM 53 H UNK 0 2.518 -1.671 0.000 0.00 0.00 H+0 HETATM 54 H UNK 0 3.600 -2.138 0.000 0.00 0.00 H+0 HETATM 55 H UNK 0 4.695 -1.704 0.000 0.00 0.00 H+0 HETATM 56 C UNK 0 2.083 -0.575 0.000 0.00 0.00 C+0 HETATM 57 H UNK 0 1.334 0.770 0.000 0.00 0.00 H+0 HETATM 58 H UNK 0 1.208 -1.843 0.000 0.00 0.00 H+0 HETATM 59 C UNK 0 0.543 -0.552 0.000 0.00 0.00 C+0 HETATM 60 H UNK 0 -0.996 -0.512 0.000 0.00 0.00 H+0 HETATM 61 H UNK 0 -0.275 -1.856 0.000 0.00 0.00 H+0 HETATM 62 C UNK 0 -0.206 0.793 0.000 0.00 0.00 C+0 HETATM 63 O UNK 0 -1.746 0.817 0.000 0.00 0.00 O+0 HETATM 64 C UNK 0 0.584 2.115 0.000 0.00 0.00 C+0 HETATM 65 C UNK 0 -0.855 2.664 0.000 0.00 0.00 C+0 HETATM 66 H UNK 0 -0.306 4.103 0.000 0.00 0.00 H+0 HETATM 67 H UNK 0 -2.294 3.213 0.000 0.00 0.00 H+0 HETATM 68 H UNK 0 -1.404 1.225 0.000 0.00 0.00 H+0 HETATM 69 C UNK 0 0.875 3.628 0.000 0.00 0.00 C+0 HETATM 70 H UNK 0 2.118 2.719 0.000 0.00 0.00 H+0 HETATM 71 H UNK 0 2.227 4.365 0.000 0.00 0.00 H+0 HETATM 72 H UNK 0 0.785 5.165 0.000 0.00 0.00 H+0 HETATM 73 C UNK 0 2.124 2.092 0.000 0.00 0.00 C+0 HETATM 74 H UNK 0 3.664 2.068 0.000 0.00 0.00 H+0 HETATM 75 C UNK 0 2.914 3.414 0.000 0.00 0.00 C+0 HETATM 76 H UNK 0 4.070 4.431 0.000 0.00 0.00 H+0 HETATM 77 H UNK 0 3.085 4.944 0.000 0.00 0.00 H+0 HETATM 78 C UNK 0 4.454 3.390 0.000 0.00 0.00 C+0 HETATM 79 H UNK 0 5.776 2.600 0.000 0.00 0.00 H+0 HETATM 80 O UNK 0 5.244 4.712 0.000 0.00 0.00 O+0 HETATM 81 H UNK 0 4.844 6.199 0.000 0.00 0.00 H+0 CONECT 1 2 CONECT 2 1 3 CONECT 3 2 4 5 49 CONECT 4 3 CONECT 5 3 6 7 8 CONECT 6 5 CONECT 7 5 CONECT 8 5 9 10 20 CONECT 9 8 CONECT 10 8 11 12 16 CONECT 11 10 CONECT 12 10 13 14 15 CONECT 13 12 CONECT 14 12 CONECT 15 12 CONECT 16 10 17 18 19 CONECT 17 16 CONECT 18 16 CONECT 19 16 CONECT 20 8 21 25 49 CONECT 21 20 22 23 24 CONECT 22 21 CONECT 23 21 CONECT 24 21 CONECT 25 20 26 27 28 CONECT 26 25 CONECT 27 25 CONECT 28 25 29 30 31 CONECT 29 28 CONECT 30 28 CONECT 31 28 32 36 44 CONECT 32 31 33 34 35 CONECT 33 32 CONECT 34 32 CONECT 35 32 CONECT 36 31 37 38 78 CONECT 37 36 CONECT 38 36 39 51 CONECT 39 38 40 41 CONECT 40 39 CONECT 41 39 42 43 44 CONECT 42 41 CONECT 43 41 CONECT 44 41 31 45 49 CONECT 45 44 46 47 48 CONECT 46 45 CONECT 47 45 CONECT 48 45 CONECT 49 44 3 20 50 CONECT 50 49 CONECT 51 38 52 56 73 CONECT 52 51 53 54 55 CONECT 53 52 CONECT 54 52 CONECT 55 52 CONECT 56 51 57 58 59 CONECT 57 56 CONECT 58 56 CONECT 59 56 60 61 62 CONECT 60 59 CONECT 61 59 CONECT 62 59 63 64 CONECT 63 62 CONECT 64 62 65 69 73 CONECT 65 64 66 67 68 CONECT 66 65 CONECT 67 65 CONECT 68 65 CONECT 69 64 70 71 72 CONECT 70 69 CONECT 71 69 CONECT 72 69 CONECT 73 64 51 74 75 CONECT 74 73 CONECT 75 73 76 77 78 CONECT 76 75 CONECT 77 75 CONECT 78 75 36 79 80 CONECT 79 78 CONECT 80 78 81 CONECT 81 80 MASTER 0 0 0 0 0 0 0 0 81 0 170 0 END 3D PDB for NP0001533 (Rubiarbonone D)COMPND NP0001533 HETATM 1 C1 UNL 1 6.938 -0.134 0.049 1.00 0.00 C HETATM 2 C2 UNL 1 5.735 0.821 -0.087 1.00 0.00 C HETATM 3 C3 UNL 1 5.914 1.855 0.972 1.00 0.00 C HETATM 4 C4 UNL 1 4.530 -0.022 0.009 1.00 0.00 C HETATM 5 C5 UNL 1 4.616 -1.030 -1.146 1.00 0.00 C HETATM 6 C6 UNL 1 3.207 -1.143 -1.726 1.00 0.00 C HETATM 7 O1 UNL 1 3.002 -2.532 -1.898 1.00 0.00 O HETATM 8 C7 UNL 1 2.417 -0.603 -0.590 1.00 0.00 C HETATM 9 C8 UNL 1 3.214 0.619 -0.216 1.00 0.00 C HETATM 10 C9 UNL 1 3.347 1.620 -1.334 1.00 0.00 C HETATM 11 C10 UNL 1 2.597 1.303 0.949 1.00 0.00 C HETATM 12 C11 UNL 1 1.102 1.420 0.874 1.00 0.00 C HETATM 13 C12 UNL 1 0.421 0.068 0.601 1.00 0.00 C HETATM 14 C13 UNL 1 0.794 -0.790 1.763 1.00 0.00 C HETATM 15 C14 UNL 1 -1.043 0.295 0.556 1.00 0.00 C HETATM 16 C15 UNL 1 -1.758 -0.500 -0.452 1.00 0.00 C HETATM 17 C16 UNL 1 -1.142 -1.435 -1.131 1.00 0.00 C HETATM 18 C17 UNL 1 0.305 -1.777 -0.953 1.00 0.00 C HETATM 19 C18 UNL 1 0.984 -0.442 -0.721 1.00 0.00 C HETATM 20 C19 UNL 1 0.591 0.422 -1.879 1.00 0.00 C HETATM 21 C20 UNL 1 -3.195 -0.202 -0.663 1.00 0.00 C HETATM 22 C21 UNL 1 -3.336 1.269 -0.973 1.00 0.00 C HETATM 23 C22 UNL 1 -3.805 -0.958 -1.823 1.00 0.00 C HETATM 24 C23 UNL 1 -5.247 -0.517 -1.927 1.00 0.00 C HETATM 25 C24 UNL 1 -5.787 0.046 -0.684 1.00 0.00 C HETATM 26 O2 UNL 1 -6.609 0.924 -0.729 1.00 0.00 O HETATM 27 C25 UNL 1 -5.325 -0.461 0.630 1.00 0.00 C HETATM 28 C26 UNL 1 -6.002 -1.828 0.807 1.00 0.00 C HETATM 29 C27 UNL 1 -5.872 0.417 1.716 1.00 0.00 C HETATM 30 C28 UNL 1 -3.837 -0.584 0.648 1.00 0.00 C HETATM 31 C29 UNL 1 -3.242 0.168 1.777 1.00 0.00 C HETATM 32 C30 UNL 1 -1.755 0.139 1.875 1.00 0.00 C HETATM 33 O3 UNL 1 -1.403 1.225 2.674 1.00 0.00 O HETATM 34 H1 UNL 1 7.839 0.476 -0.079 1.00 0.00 H HETATM 35 H2 UNL 1 6.860 -0.961 -0.682 1.00 0.00 H HETATM 36 H3 UNL 1 6.915 -0.480 1.105 1.00 0.00 H HETATM 37 H4 UNL 1 5.859 1.243 -1.128 1.00 0.00 H HETATM 38 H5 UNL 1 5.978 2.863 0.466 1.00 0.00 H HETATM 39 H6 UNL 1 5.152 1.875 1.748 1.00 0.00 H HETATM 40 H7 UNL 1 6.903 1.781 1.515 1.00 0.00 H HETATM 41 H8 UNL 1 4.562 -0.572 0.989 1.00 0.00 H HETATM 42 H9 UNL 1 5.254 -0.653 -1.958 1.00 0.00 H HETATM 43 H10 UNL 1 5.010 -1.987 -0.785 1.00 0.00 H HETATM 44 H11 UNL 1 3.109 -0.691 -2.695 1.00 0.00 H HETATM 45 H12 UNL 1 2.802 -2.973 -1.037 1.00 0.00 H HETATM 46 H13 UNL 1 2.622 -1.369 0.221 1.00 0.00 H HETATM 47 H14 UNL 1 4.149 2.343 -0.993 1.00 0.00 H HETATM 48 H15 UNL 1 2.448 2.289 -1.422 1.00 0.00 H HETATM 49 H16 UNL 1 3.696 1.215 -2.278 1.00 0.00 H HETATM 50 H17 UNL 1 2.956 2.379 0.929 1.00 0.00 H HETATM 51 H18 UNL 1 2.953 0.935 1.942 1.00 0.00 H HETATM 52 H19 UNL 1 0.745 2.209 0.216 1.00 0.00 H HETATM 53 H20 UNL 1 0.756 1.694 1.911 1.00 0.00 H HETATM 54 H21 UNL 1 0.460 -1.820 1.730 1.00 0.00 H HETATM 55 H22 UNL 1 0.408 -0.252 2.683 1.00 0.00 H HETATM 56 H23 UNL 1 1.894 -0.802 1.999 1.00 0.00 H HETATM 57 H24 UNL 1 -1.238 1.378 0.270 1.00 0.00 H HETATM 58 H25 UNL 1 -1.669 -2.046 -1.896 1.00 0.00 H HETATM 59 H26 UNL 1 0.702 -2.186 -1.911 1.00 0.00 H HETATM 60 H27 UNL 1 0.490 -2.515 -0.185 1.00 0.00 H HETATM 61 H28 UNL 1 0.219 1.423 -1.590 1.00 0.00 H HETATM 62 H29 UNL 1 1.442 0.455 -2.590 1.00 0.00 H HETATM 63 H30 UNL 1 -0.232 -0.016 -2.511 1.00 0.00 H HETATM 64 H31 UNL 1 -4.093 1.454 -1.791 1.00 0.00 H HETATM 65 H32 UNL 1 -3.645 1.882 -0.132 1.00 0.00 H HETATM 66 H33 UNL 1 -2.388 1.707 -1.382 1.00 0.00 H HETATM 67 H34 UNL 1 -3.291 -0.614 -2.744 1.00 0.00 H HETATM 68 H35 UNL 1 -3.698 -2.044 -1.751 1.00 0.00 H HETATM 69 H36 UNL 1 -5.402 0.214 -2.745 1.00 0.00 H HETATM 70 H37 UNL 1 -5.872 -1.405 -2.190 1.00 0.00 H HETATM 71 H38 UNL 1 -7.072 -1.665 1.036 1.00 0.00 H HETATM 72 H39 UNL 1 -5.961 -2.330 -0.203 1.00 0.00 H HETATM 73 H40 UNL 1 -5.516 -2.426 1.583 1.00 0.00 H HETATM 74 H41 UNL 1 -5.668 1.504 1.532 1.00 0.00 H HETATM 75 H42 UNL 1 -6.998 0.344 1.635 1.00 0.00 H HETATM 76 H43 UNL 1 -5.632 0.097 2.731 1.00 0.00 H HETATM 77 H44 UNL 1 -3.592 -1.671 0.799 1.00 0.00 H HETATM 78 H45 UNL 1 -3.670 1.192 1.786 1.00 0.00 H HETATM 79 H46 UNL 1 -3.635 -0.305 2.727 1.00 0.00 H HETATM 80 H47 UNL 1 -1.479 -0.844 2.296 1.00 0.00 H HETATM 81 H48 UNL 1 -1.791 2.020 2.261 1.00 0.00 H CONECT 1 2 34 35 36 CONECT 2 3 4 37 CONECT 3 38 39 40 CONECT 4 5 9 41 CONECT 5 6 42 43 CONECT 6 7 8 44 CONECT 7 45 CONECT 8 9 19 46 CONECT 9 10 11 CONECT 10 47 48 49 CONECT 11 12 50 51 CONECT 12 13 52 53 CONECT 13 14 15 19 CONECT 14 54 55 56 CONECT 15 16 32 57 CONECT 16 17 17 21 CONECT 17 18 58 CONECT 18 19 59 60 CONECT 19 20 CONECT 20 61 62 63 CONECT 21 22 23 30 CONECT 22 64 65 66 CONECT 23 24 67 68 CONECT 24 25 69 70 CONECT 25 26 26 27 CONECT 27 28 29 30 CONECT 28 71 72 73 CONECT 29 74 75 76 CONECT 30 31 77 CONECT 31 32 78 79 CONECT 32 33 80 CONECT 33 81 END SMILES for NP0001533 (Rubiarbonone D)[H]O[C@]1([H])C([H])([H])[C@@]([H])(C([H])(C([H])([H])[H])C([H])([H])[H])[C@]2(C([H])([H])[H])C([H])([H])C([H])([H])[C@@]3(C([H])([H])[H])[C@@]4([H])C(=C([H])C([H])([H])[C@]3(C([H])([H])[H])[C@@]12[H])[C@@]1(C([H])([H])[H])C([H])([H])C([H])([H])C(=O)C(C([H])([H])[H])(C([H])([H])[H])[C@]1([H])C([H])([H])[C@]4([H])O[H] INCHI for NP0001533 (Rubiarbonone D)InChI=1S/C30H48O3/c1-17(2)19-15-21(32)25-28(19,6)13-14-29(7)24-18(9-12-30(25,29)8)27(5)11-10-23(33)26(3,4)22(27)16-20(24)31/h9,17,19-22,24-25,31-32H,10-16H2,1-8H3/t19-,20-,21+,22-,24-,25-,27+,28-,29-,30+/m0/s1 3D Structure for NP0001533 (Rubiarbonone D) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Synonyms | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Chemical Formula | C30H48O3 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Average Mass | 456.7110 Da | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Monoisotopic Mass | 456.36035 Da | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IUPAC Name | (1S,2S,5S,6S,8R,9S,10R,14S,19R,21S)-8,21-dihydroxy-2,5,10,14,18,18-hexamethyl-6-(propan-2-yl)pentacyclo[11.8.0.0^{2,10}.0^{5,9}.0^{14,19}]henicos-12-en-17-one | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Traditional Name | (1S,2S,5S,6S,8R,9S,10R,14S,19R,21S)-8,21-dihydroxy-6-isopropyl-2,5,10,14,18,18-hexamethylpentacyclo[11.8.0.0^{2,10}.0^{5,9}.0^{14,19}]henicos-12-en-17-one | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
CAS Registry Number | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SMILES | [H]O[C@]1([H])C([H])([H])[C@@]([H])(C([H])(C([H])([H])[H])C([H])([H])[H])[C@]2(C([H])([H])[H])C([H])([H])C([H])([H])[C@@]3(C([H])([H])[H])[C@@]4([H])C(=C([H])C([H])([H])[C@]3(C([H])([H])[H])[C@@]12[H])[C@@]1(C([H])([H])[H])C([H])([H])C([H])([H])C(=O)C(C([H])([H])[H])(C([H])([H])[H])[C@]1([H])C([H])([H])[C@]4([H])O[H] | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
InChI Identifier | InChI=1S/C30H48O3/c1-17(2)19-15-21(32)25-28(19,6)13-14-29(7)24-18(9-12-30(25,29)8)27(5)11-10-23(33)26(3,4)22(27)16-20(24)31/h9,17,19-22,24-25,31-32H,10-16H2,1-8H3/t19-,20-,21+,22-,24-,25-,27+,28-,29-,30+/m0/s1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
InChI Key | GJCFGYOIXLZELH-LHASHULKSA-N | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Experimental Spectra | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Predicted Spectra | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Chemical Shift Submissions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Species | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Species of Origin |
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Chemical Taxonomy | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Description | Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Kingdom | Organic compounds | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Super Class | Lipids and lipid-like molecules | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Class | Prenol lipids | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sub Class | Triterpenoids | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Direct Parent | Triterpenoids | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alternative Parents | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Substituents |
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Molecular Framework | Aliphatic homopolycyclic compounds | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
External Descriptors | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Physical Properties | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
State | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Experimental Properties |
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Predicted Properties |
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External Links | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
HMDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DrugBank ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Phenol Explorer Compound ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
FoodDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
KNApSAcK ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Chemspider ID | 10001238 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
KEGG Compound ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
BioCyc ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
BiGG ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Wikipedia Link | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
METLIN ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
PubChem Compound | 11826588 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
PDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
ChEBI ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Good Scents ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
References | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
General References | Not Available |