Np mrd loader

Showing NP-Card for PC(16:0/16:0) (NP0000429)

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Record Information
Version1.0
Created at2005-11-16 15:48:42 UTC
Updated at2020-11-24 22:15:25 UTC
NP-MRD IDNP0000429
Secondary Accession NumbersNone
Natural Product Identification
Common NamePC(16:0/16:0)
DescriptionPC(16:0/16:0) Is a phosphatidylcholine (PC or GPCho). It is a glycerophospholipid in which a phosphorylcholine moiety occupies a glycerol substitution site. As is the case with diacylglycerols, glycerophosphocholines can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PC(16:0/16:0), In particular, consists of two chains of palmitic acid at the C-1 and C-2 positions. The palmitic acid moieties are derived from fish oils, milk fats, vegetable oils and animal fats. Phospholipids, are ubiquitous in nature and are key components of the lipid bilayer of cells, as well as being involved in metabolism and signaling. Dipalmitoylphosphatidylcholine (DPPC) is the major constituent of pulmonary surfactant. It is also used for research purposes in studying liposomes, lipid bilayers, and model biological membranes. While most phospholipids have a saturated fatty acid on C-1 and an unsaturated fatty acid on C-2 of the glycerol backbone, the fatty acid distribution at the C-1 and C-2 positions of glycerol within phospholipids is continually in flux, owing to phospholipid degradation and the continuous phospholipid remodeling that occurs while these molecules are in membranes. PCs can be synthesized via three different routes. In one route, choline is activated first by phosphorylation and then by coupling to CDP prior to attachment to phosphatidic acid. PCs can also synthesized by the addition of choline to CDP-activated 1,2-diacylglycerol. A third route to PC synthesis involves the conversion of either PS or PE to PC.
Structure
Thumb
MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for NP0000429 (PC(16:0/16:0))

PC(16:0/16:0)
  Mrv1652309042000032D          

 51 50  0  0  1  0            999 V2000
   17.2908  -10.1901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.5855  -10.5973    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   15.8804  -10.1901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.9959  -10.5973    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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   16.5855  -11.4116    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   18.7012  -10.1901    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   19.1084  -10.8954    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
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 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
M  CHG  2   8  -1  13   1
M  END
Download

3D MOL for NP0000429 (PC(16:0/16:0))

HMDB0000564
     RDKit          3D
PC(16:0/16:0)
130129  0  0  0  0  0  0  0  0999 V2000
   -0.9115   -2.5339   -6.2346 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8943   -3.7704   -5.3411 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2730   -3.3660   -3.9460 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  CHG  2  25  -1  29   1
M  END
Download

3D SDF for NP0000429 (PC(16:0/16:0))

PC(16:0/16:0)
  Mrv1652309042000032D          

 51 50  0  0  1  0            999 V2000
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 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
M  CHG  2   8  -1  13   1
M  END
> <DATABASE_ID>
NP0000429

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H][C@@](COC(=O)CCCCCCCCCCCCCCC)(COP([O-])(=O)OCC[N+](C)(C)C)OC(=O)CCCCCCCCCCCCCCC

> <INCHI_IDENTIFIER>
InChI=1S/C40H80NO8P/c1-6-8-10-12-14-16-18-20-22-24-26-28-30-32-39(42)46-36-38(37-48-50(44,45)47-35-34-41(3,4)5)49-40(43)33-31-29-27-25-23-21-19-17-15-13-11-9-7-2/h38H,6-37H2,1-5H3/t38-/m1/s1

> <INCHI_KEY>
KILNVBDSWZSGLL-KXQOOQHDSA-N

> <FORMULA>
C40H80NO8P

> <MOLECULAR_WEIGHT>
734.0389

> <EXACT_MASS>
733.562155053

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
130

> <JCHEM_AVERAGE_POLARIZABILITY>
91.99893286015808

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2-{[(2R)-2,3-bis(hexadecanoyloxy)propyl phosphono]oxy}ethyl)trimethylazanium

> <ALOGPS_LOGP>
5.29

> <JCHEM_LOGP>
8.11379637919492

> <ALOGPS_LOGS>
-7.52

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.8550572064469137

> <JCHEM_PKA_STRONGEST_BASIC>
-6.744159309169687

> <JCHEM_POLAR_SURFACE_AREA>
111.19

> <JCHEM_REFRACTIVITY>
215.8651

> <JCHEM_ROTATABLE_BOND_COUNT>
40

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.40e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2-{[(2R)-2,3-bis(hexadecanoyloxy)propyl phosphono]oxy}ethyl)trimethylazanium

> <JCHEM_VEBER_RULE>
0

$$$$
Download

3D-SDF for NP0000429 (PC(16:0/16:0))

HMDB0000564
     RDKit          3D
PC(16:0/16:0)
130129  0  0  0  0  0  0  0  0999 V2000
   -0.9115   -2.5339   -6.2346 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.0344    5.9144    0.1920 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1825   -2.8502   -7.2616 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6435   -1.8012   -5.8847 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1002   -2.0968   -6.2649 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6748   -4.4809   -5.7610 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0427   -4.3189   -5.3527 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2616   -2.8608   -3.9572 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2535   -4.2142   -3.2449 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5493   -2.0548   -2.3974 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3754   -1.4429   -4.1230 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4165   -3.2981   -4.4295 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1112   -3.7607   -2.7567 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9260   -1.7854   -1.8018 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0919   -2.6813   -2.7479 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0304   -1.0081   -4.5930 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5945   -0.4416   -3.0105 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9996    0.0346   -4.5645 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9622    0.4750   -2.8771 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4848    1.5166   -5.2962 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3278    2.3603   -4.2708 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4924    3.2927   -4.1692 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3129    1.8425   -3.6821 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3883    3.6585   -2.0803 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1276    3.4596   -1.9274 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8405    1.6230   -1.1254 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6155    1.0940   -0.9080 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9525    3.1850    0.3670 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1749    3.5470    0.1685 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8763    2.3466    2.3722 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4376    1.0259    1.3201 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4829    1.9595    1.4174 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2011    0.5824    0.4631 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0855   -0.6442    4.9077 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5649   -1.0601    3.9817 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4897   -3.0234    4.6782 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1135   -2.4458    3.1383 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6232   -3.8524    4.1546 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9779   -2.2727    4.0163 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6264   -1.8598    2.9083 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4090    0.5843    3.0203 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7166    0.0528    4.1078 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.9876    0.9735    1.2259 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7123    0.2759    0.2080 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2412    1.3628    1.5552 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.0144   -0.4865    2.0120 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3513   -0.5444    3.6790 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3769   -2.0371    2.6560 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4248   -2.6741    1.9607 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0569   -1.8466    0.5204 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3818   -1.4830    1.0021 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6634   -5.4192    0.9182 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1637   -4.5132    1.1899 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5965   -3.4759   -0.1380 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1931   -3.8455   -0.8371 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9416   -1.4637   -0.5569 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7306   -1.5757    1.1876 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1900   -2.3479   -0.5241 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1206   -2.7321    1.2102 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6622   -0.3338    1.6594 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8509    0.0679   -0.0702 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1042   -1.2719    1.5320 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0609   -0.7942   -0.2137 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2602    0.9224    1.1278 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7860    1.5515    0.3513 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0734    0.6166    3.2335 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5373    1.3087    2.4830 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7581    2.9394    3.8447 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2366    2.7088    2.8536 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0250    4.7319    2.2926 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0179    3.6014    0.8506 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7127    2.8983    1.5111 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7566    4.0907    2.8884 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0441    5.9345    1.2605 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0468    4.7240   -0.0815 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8457    5.1589    2.0323 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7747    3.9187    0.7538 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8643    6.9867    0.4157 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8424    5.8559   -0.9718 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3932    5.5299   -0.7646 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2921    5.2030    0.9908 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3510    6.9319    0.3968 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  2  0
 16 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  2  0
 23 25  1  0
 23 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  1  0
 29 31  1  0
 29 32  1  0
 20 33  1  0
 33 34  1  0
 34 35  2  0
 34 36  1  0
 36 37  1  0
 37 38  1  0
 38 39  1  0
 39 40  1  0
 40 41  1  0
 41 42  1  0
 42 43  1  0
 43 44  1  0
 44 45  1  0
 45 46  1  0
 46 47  1  0
 47 48  1  0
 48 49  1  0
 49 50  1  0
  1 51  1  0
  1 52  1  0
  1 53  1  0
  2 54  1  0
  2 55  1  0
  3 56  1  0
  3 57  1  0
  4 58  1  0
  4 59  1  0
  5 60  1  0
  5 61  1  0
  6 62  1  0
  6 63  1  0
  7 64  1  0
  7 65  1  0
  8 66  1  0
  8 67  1  0
  9 68  1  0
  9 69  1  0
 10 70  1  0
 10 71  1  0
 11 72  1  0
 11 73  1  0
 12 74  1  0
 12 75  1  0
 13 76  1  0
 13 77  1  0
 14 78  1  0
 14 79  1  0
 15 80  1  0
 15 81  1  0
 19 82  1  0
 19 83  1  0
 20 84  1  1
 21 85  1  0
 21 86  1  0
 27 87  1  0
 27 88  1  0
 28 89  1  0
 28 90  1  0
 30 91  1  0
 30 92  1  0
 30 93  1  0
 31 94  1  0
 31 95  1  0
 31 96  1  0
 32 97  1  0
 32 98  1  0
 32 99  1  0
 36100  1  0
 36101  1  0
 37102  1  0
 37103  1  0
 38104  1  0
 38105  1  0
 39106  1  0
 39107  1  0
 40108  1  0
 40109  1  0
 41110  1  0
 41111  1  0
 42112  1  0
 42113  1  0
 43114  1  0
 43115  1  0
 44116  1  0
 44117  1  0
 45118  1  0
 45119  1  0
 46120  1  0
 46121  1  0
 47122  1  0
 47123  1  0
 48124  1  0
 48125  1  0
 49126  1  0
 49127  1  0
 50128  1  0
 50129  1  0
 50130  1  0
M  CHG  2  25  -1  29   1
M  END
Download

PDB for NP0000429 (PC(16:0/16:0))

HEADER    PROTEIN                                 04-SEP-20   NONE
TITLE     NULL                                                        
COMPND    MOLECULE: PC(16:0/16:0)                                     
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   04-SEP-20         0                                  
HETATM    1  C   UNK     0      32.276 -19.022   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      30.960 -19.782   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      29.643 -19.022   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      33.592 -19.782   0.000  0.00  0.00           O+0
HETATM    5  O   UNK     0      28.327 -19.782   0.000  0.00  0.00           O+0
HETATM    6  O   UNK     0      30.960 -21.302   0.000  0.00  0.00           O+0
HETATM    7  P   UNK     0      34.909 -19.022   0.000  0.00  0.00           P+0
HETATM    8  O   UNK     0      35.669 -20.338   0.000  0.00  0.00           O-1
HETATM    9  O   UNK     0      34.149 -17.705   0.000  0.00  0.00           O+0
HETATM   10  O   UNK     0      36.225 -18.261   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0      37.541 -19.022   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      38.858 -18.261   0.000  0.00  0.00           C+0
HETATM   13  N   UNK     0      40.174 -19.022   0.000  0.00  0.00           N+1
HETATM   14  C   UNK     0      39.414 -20.338   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      41.393 -17.430   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      41.491 -19.782   0.000  0.00  0.00           C+0
HETATM   17  H   UNK     0      32.433 -20.809   0.000  0.00  0.00           H+0
HETATM   18  C   UNK     0      26.993 -19.012   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      26.993 -17.572   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0      25.660 -19.783   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      24.327 -19.012   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      22.994 -19.783   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      21.661 -19.012   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      20.328 -19.783   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      18.995 -19.012   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      17.662 -19.783   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      16.329 -19.012   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      14.996 -19.783   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      13.663 -19.012   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      12.330 -19.783   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      10.997 -19.012   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       9.663 -19.783   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       8.330 -19.012   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       6.997 -19.783   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      29.626 -22.071   0.000  0.00  0.00           C+0
HETATM   36  O   UNK     0      29.626 -23.511   0.000  0.00  0.00           O+0
HETATM   37  C   UNK     0      28.293 -21.300   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      26.960 -22.071   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      25.627 -21.300   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      24.294 -22.071   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      22.961 -21.300   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0      21.628 -22.071   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0      20.295 -21.300   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0      18.962 -22.071   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0      17.629 -21.300   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0      16.295 -22.071   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      14.962 -21.300   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      13.629 -22.071   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0      12.296 -21.300   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0      10.963 -22.071   0.000  0.00  0.00           C+0
HETATM   51  C   UNK     0       9.630 -21.300   0.000  0.00  0.00           C+0
CONECT    1    4    2                                                       
CONECT    2    1    6   17    3                                             
CONECT    3    2    5                                                       
CONECT    4    1    7                                                       
CONECT    5    3   18                                                       
CONECT    6    2   35                                                       
CONECT    7    4    8    9   10                                             
CONECT    8    7                                                            
CONECT    9    7                                                            
CONECT   10    7   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   15   16                                             
CONECT   14   13                                                            
CONECT   15   13                                                            
CONECT   16   13                                                            
CONECT   17    2                                                            
CONECT   18    5   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33                                                            
CONECT   35    6   36   37                                                  
CONECT   36   35                                                            
CONECT   37   35   38                                                       
CONECT   38   37   39                                                       
CONECT   39   38   40                                                       
CONECT   40   39   41                                                       
CONECT   41   40   42                                                       
CONECT   42   41   43                                                       
CONECT   43   42   44                                                       
CONECT   44   43   45                                                       
CONECT   45   44   46                                                       
CONECT   46   45   47                                                       
CONECT   47   46   48                                                       
CONECT   48   47   49                                                       
CONECT   49   48   50                                                       
CONECT   50   49   51                                                       
CONECT   51   50                                                            
MASTER        0    0    0    0    0    0    0    0   51    0  100    0
END
Download

3D PDB for NP0000429 (PC(16:0/16:0))

COMPND    HMDB0000564
HETATM    1  C1  UNL     1      -0.912  -2.534  -6.235  1.00  0.00           C  
HETATM    2  C2  UNL     1      -0.894  -3.770  -5.341  1.00  0.00           C  
HETATM    3  C3  UNL     1      -1.273  -3.366  -3.946  1.00  0.00           C  
HETATM    4  C4  UNL     1      -0.260  -2.309  -3.462  1.00  0.00           C  
HETATM    5  C5  UNL     1       1.117  -2.830  -3.432  1.00  0.00           C  
HETATM    6  C6  UNL     1       2.183  -1.975  -2.928  1.00  0.00           C  
HETATM    7  C7  UNL     1       2.640  -0.724  -3.545  1.00  0.00           C  
HETATM    8  C8  UNL     1       1.680   0.362  -3.673  1.00  0.00           C  
HETATM    9  C9  UNL     1       2.212   1.657  -4.206  1.00  0.00           C  
HETATM   10  C10 UNL     1       3.302   2.346  -3.545  1.00  0.00           C  
HETATM   11  C11 UNL     1       3.192   2.853  -2.163  1.00  0.00           C  
HETATM   12  C12 UNL     1       2.908   1.905  -1.057  1.00  0.00           C  
HETATM   13  C13 UNL     1       2.954   2.758   0.230  1.00  0.00           C  
HETATM   14  C14 UNL     1       2.669   1.854   1.384  1.00  0.00           C  
HETATM   15  C15 UNL     1       1.302   1.217   1.369  1.00  0.00           C  
HETATM   16  C16 UNL     1       1.130   0.329   2.573  1.00  0.00           C  
HETATM   17  O1  UNL     1       2.132   0.130   3.263  1.00  0.00           O  
HETATM   18  O2  UNL     1      -0.056  -0.223   2.891  1.00  0.00           O  
HETATM   19  C17 UNL     1      -0.424  -1.069   3.910  1.00  0.00           C  
HETATM   20  C18 UNL     1       0.011  -2.488   3.805  1.00  0.00           C  
HETATM   21  C19 UNL     1       1.453  -2.713   3.968  1.00  0.00           C  
HETATM   22  O3  UNL     1       1.886  -2.169   5.178  1.00  0.00           O  
HETATM   23  P1  UNL     1       3.545  -2.407   5.405  1.00  0.00           P  
HETATM   24  O4  UNL     1       3.763  -2.463   6.916  1.00  0.00           O  
HETATM   25  O5  UNL     1       4.015  -3.893   4.775  1.00  0.00           O1-
HETATM   26  O6  UNL     1       4.476  -1.133   4.826  1.00  0.00           O  
HETATM   27  C20 UNL     1       5.255  -1.482   3.739  1.00  0.00           C  
HETATM   28  C21 UNL     1       6.053  -0.278   3.286  1.00  0.00           C  
HETATM   29  N1  UNL     1       6.886  -0.592   2.147  1.00  0.00           N1+
HETATM   30  C22 UNL     1       6.945   0.551   1.275  1.00  0.00           C  
HETATM   31  C23 UNL     1       8.225  -0.949   2.641  1.00  0.00           C  
HETATM   32  C24 UNL     1       6.387  -1.720   1.397  1.00  0.00           C  
HETATM   33  O7  UNL     1      -0.549  -2.983   2.593  1.00  0.00           O  
HETATM   34  C25 UNL     1      -1.505  -3.957   2.496  1.00  0.00           C  
HETATM   35  O8  UNL     1      -1.927  -4.481   3.554  1.00  0.00           O  
HETATM   36  C26 UNL     1      -2.067  -4.425   1.199  1.00  0.00           C  
HETATM   37  C27 UNL     1      -1.681  -3.474   0.075  1.00  0.00           C  
HETATM   38  C28 UNL     1      -2.202  -2.081   0.343  1.00  0.00           C  
HETATM   39  C29 UNL     1      -3.722  -2.052   0.436  1.00  0.00           C  
HETATM   40  C30 UNL     1      -4.187  -0.628   0.737  1.00  0.00           C  
HETATM   41  C31 UNL     1      -5.679  -0.544   0.809  1.00  0.00           C  
HETATM   42  C32 UNL     1      -6.156   0.835   1.130  1.00  0.00           C  
HETATM   43  C33 UNL     1      -5.662   1.312   2.476  1.00  0.00           C  
HETATM   44  C34 UNL     1      -6.123   2.686   2.819  1.00  0.00           C  
HETATM   45  C35 UNL     1      -5.670   3.766   1.887  1.00  0.00           C  
HETATM   46  C36 UNL     1      -4.146   3.846   1.856  1.00  0.00           C  
HETATM   47  C37 UNL     1      -3.655   4.935   0.933  1.00  0.00           C  
HETATM   48  C38 UNL     1      -2.150   4.927   0.982  1.00  0.00           C  
HETATM   49  C39 UNL     1      -1.533   5.987   0.088  1.00  0.00           C  
HETATM   50  C40 UNL     1      -0.034   5.914   0.192  1.00  0.00           C  
HETATM   51  H1  UNL     1      -1.182  -2.850  -7.262  1.00  0.00           H  
HETATM   52  H2  UNL     1      -1.644  -1.801  -5.885  1.00  0.00           H  
HETATM   53  H3  UNL     1       0.100  -2.097  -6.265  1.00  0.00           H  
HETATM   54  H4  UNL     1      -1.675  -4.481  -5.761  1.00  0.00           H  
HETATM   55  H5  UNL     1       0.043  -4.319  -5.353  1.00  0.00           H  
HETATM   56  H6  UNL     1      -2.262  -2.861  -3.957  1.00  0.00           H  
HETATM   57  H7  UNL     1      -1.253  -4.214  -3.245  1.00  0.00           H  
HETATM   58  H8  UNL     1      -0.549  -2.055  -2.397  1.00  0.00           H  
HETATM   59  H9  UNL     1      -0.375  -1.443  -4.123  1.00  0.00           H  
HETATM   60  H10 UNL     1       1.417  -3.298  -4.429  1.00  0.00           H  
HETATM   61  H11 UNL     1       1.111  -3.761  -2.757  1.00  0.00           H  
HETATM   62  H12 UNL     1       1.926  -1.785  -1.802  1.00  0.00           H  
HETATM   63  H13 UNL     1       3.092  -2.681  -2.748  1.00  0.00           H  
HETATM   64  H14 UNL     1       3.030  -1.008  -4.593  1.00  0.00           H  
HETATM   65  H15 UNL     1       3.595  -0.442  -3.010  1.00  0.00           H  
HETATM   66  H16 UNL     1       1.000   0.035  -4.565  1.00  0.00           H  
HETATM   67  H17 UNL     1       0.962   0.475  -2.877  1.00  0.00           H  
HETATM   68  H18 UNL     1       2.485   1.517  -5.296  1.00  0.00           H  
HETATM   69  H19 UNL     1       1.328   2.360  -4.271  1.00  0.00           H  
HETATM   70  H20 UNL     1       3.492   3.293  -4.169  1.00  0.00           H  
HETATM   71  H21 UNL     1       4.313   1.842  -3.682  1.00  0.00           H  
HETATM   72  H22 UNL     1       2.388   3.658  -2.080  1.00  0.00           H  
HETATM   73  H23 UNL     1       4.128   3.460  -1.927  1.00  0.00           H  
HETATM   74  H24 UNL     1       1.841   1.623  -1.125  1.00  0.00           H  
HETATM   75  H25 UNL     1       3.616   1.094  -0.908  1.00  0.00           H  
HETATM   76  H26 UNL     1       3.953   3.185   0.367  1.00  0.00           H  
HETATM   77  H27 UNL     1       2.175   3.547   0.168  1.00  0.00           H  
HETATM   78  H28 UNL     1       2.876   2.347   2.372  1.00  0.00           H  
HETATM   79  H29 UNL     1       3.438   1.026   1.320  1.00  0.00           H  
HETATM   80  H30 UNL     1       0.483   1.959   1.417  1.00  0.00           H  
HETATM   81  H31 UNL     1       1.201   0.582   0.463  1.00  0.00           H  
HETATM   82  H32 UNL     1      -0.086  -0.644   4.908  1.00  0.00           H  
HETATM   83  H33 UNL     1      -1.565  -1.060   3.982  1.00  0.00           H  
HETATM   84  H34 UNL     1      -0.490  -3.023   4.678  1.00  0.00           H  
HETATM   85  H35 UNL     1       2.114  -2.446   3.138  1.00  0.00           H  
HETATM   86  H36 UNL     1       1.623  -3.852   4.155  1.00  0.00           H  
HETATM   87  H37 UNL     1       5.978  -2.273   4.016  1.00  0.00           H  
HETATM   88  H38 UNL     1       4.626  -1.860   2.908  1.00  0.00           H  
HETATM   89  H39 UNL     1       5.409   0.584   3.020  1.00  0.00           H  
HETATM   90  H40 UNL     1       6.717   0.053   4.108  1.00  0.00           H  
HETATM   91  H41 UNL     1       7.988   0.974   1.226  1.00  0.00           H  
HETATM   92  H42 UNL     1       6.712   0.276   0.208  1.00  0.00           H  
HETATM   93  H43 UNL     1       6.241   1.363   1.555  1.00  0.00           H  
HETATM   94  H44 UNL     1       9.014  -0.487   2.012  1.00  0.00           H  
HETATM   95  H45 UNL     1       8.351  -0.544   3.679  1.00  0.00           H  
HETATM   96  H46 UNL     1       8.377  -2.037   2.656  1.00  0.00           H  
HETATM   97  H47 UNL     1       6.425  -2.674   1.961  1.00  0.00           H  
HETATM   98  H48 UNL     1       7.057  -1.847   0.520  1.00  0.00           H  
HETATM   99  H49 UNL     1       5.382  -1.483   1.002  1.00  0.00           H  
HETATM  100  H50 UNL     1      -1.663  -5.419   0.918  1.00  0.00           H  
HETATM  101  H51 UNL     1      -3.164  -4.513   1.190  1.00  0.00           H  
HETATM  102  H52 UNL     1      -0.596  -3.476  -0.138  1.00  0.00           H  
HETATM  103  H53 UNL     1      -2.193  -3.845  -0.837  1.00  0.00           H  
HETATM  104  H54 UNL     1      -1.942  -1.464  -0.557  1.00  0.00           H  
HETATM  105  H55 UNL     1      -1.731  -1.576   1.188  1.00  0.00           H  
HETATM  106  H56 UNL     1      -4.190  -2.348  -0.524  1.00  0.00           H  
HETATM  107  H57 UNL     1      -4.121  -2.732   1.210  1.00  0.00           H  
HETATM  108  H58 UNL     1      -3.662  -0.334   1.659  1.00  0.00           H  
HETATM  109  H59 UNL     1      -3.851   0.068  -0.070  1.00  0.00           H  
HETATM  110  H60 UNL     1      -6.104  -1.272   1.532  1.00  0.00           H  
HETATM  111  H61 UNL     1      -6.061  -0.794  -0.214  1.00  0.00           H  
HETATM  112  H62 UNL     1      -7.260   0.922   1.128  1.00  0.00           H  
HETATM  113  H63 UNL     1      -5.786   1.551   0.351  1.00  0.00           H  
HETATM  114  H64 UNL     1      -6.073   0.617   3.234  1.00  0.00           H  
HETATM  115  H65 UNL     1      -4.537   1.309   2.483  1.00  0.00           H  
HETATM  116  H66 UNL     1      -5.758   2.939   3.845  1.00  0.00           H  
HETATM  117  H67 UNL     1      -7.237   2.709   2.854  1.00  0.00           H  
HETATM  118  H68 UNL     1      -6.025   4.732   2.293  1.00  0.00           H  
HETATM  119  H69 UNL     1      -6.018   3.601   0.851  1.00  0.00           H  
HETATM  120  H70 UNL     1      -3.713   2.898   1.511  1.00  0.00           H  
HETATM  121  H71 UNL     1      -3.757   4.091   2.888  1.00  0.00           H  
HETATM  122  H72 UNL     1      -4.044   5.934   1.261  1.00  0.00           H  
HETATM  123  H73 UNL     1      -4.047   4.724  -0.081  1.00  0.00           H  
HETATM  124  H74 UNL     1      -1.846   5.159   2.032  1.00  0.00           H  
HETATM  125  H75 UNL     1      -1.775   3.919   0.754  1.00  0.00           H  
HETATM  126  H76 UNL     1      -1.864   6.987   0.416  1.00  0.00           H  
HETATM  127  H77 UNL     1      -1.842   5.856  -0.972  1.00  0.00           H  
HETATM  128  H78 UNL     1       0.393   5.530  -0.765  1.00  0.00           H  
HETATM  129  H79 UNL     1       0.292   5.203   0.991  1.00  0.00           H  
HETATM  130  H80 UNL     1       0.351   6.932   0.397  1.00  0.00           H  
CONECT    1    2   51   52   53
CONECT    2    3   54   55
CONECT    3    4   56   57
CONECT    4    5   58   59
CONECT    5    6   60   61
CONECT    6    7   62   63
CONECT    7    8   64   65
CONECT    8    9   66   67
CONECT    9   10   68   69
CONECT   10   11   70   71
CONECT   11   12   72   73
CONECT   12   13   74   75
CONECT   13   14   76   77
CONECT   14   15   78   79
CONECT   15   16   80   81
CONECT   16   17   17   18
CONECT   18   19
CONECT   19   20   82   83
CONECT   20   21   33   84
CONECT   21   22   85   86
CONECT   22   23
CONECT   23   24   24   25   26
CONECT   26   27
CONECT   27   28   87   88
CONECT   28   29   89   90
CONECT   29   30   31   32
CONECT   30   91   92   93
CONECT   31   94   95   96
CONECT   32   97   98   99
CONECT   33   34
CONECT   34   35   35   36
CONECT   36   37  100  101
CONECT   37   38  102  103
CONECT   38   39  104  105
CONECT   39   40  106  107
CONECT   40   41  108  109
CONECT   41   42  110  111
CONECT   42   43  112  113
CONECT   43   44  114  115
CONECT   44   45  116  117
CONECT   45   46  118  119
CONECT   46   47  120  121
CONECT   47   48  122  123
CONECT   48   49  124  125
CONECT   49   50  126  127
CONECT   50  128  129  130
END
Download

SMILES for NP0000429 (PC(16:0/16:0))

[H][C@@](COC(=O)CCCCCCCCCCCCCCC)(COP([O-])(=O)OCC[N+](C)(C)C)OC(=O)CCCCCCCCCCCCCCC
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INCHI for NP0000429 (PC(16:0/16:0))

InChI=1S/C40H80NO8P/c1-6-8-10-12-14-16-18-20-22-24-26-28-30-32-39(42)46-36-38(37-48-50(44,45)47-35-34-41(3,4)5)49-40(43)33-31-29-27-25-23-21-19-17-15-13-11-9-7-2/h38H,6-37H2,1-5H3/t38-/m1/s1
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View in JSmolView NMR Assignments
Synonyms
ValueSource
1,2-Bis(hexadecanoyl)-sn-glycero-3-phosphocholineChEBI
1,2-Dipalmitoyl-L-lecithinChEBI
1,2-Dipalmitoyl-sn-glycero-3-phosphatidylcholineChEBI
1,2-Dipalmitoyl-sn-glycero-3-phosphocholineChEBI
1,2-DipalmitoylphosphatidylcholineChEBI
1-16:0-2-16:0-PhosphatidylcholineChEBI
16:0-16:0-PCChEBI
Colfosceril palmitateChEBI
Colfoscerili palmitasChEBI
Dipalmitoyl phosphatidylcholineChEBI
Dipalmitoyl-GPCChEBI
DipalmitoylphosphatidylcholineChEBI
GPC(16:0/16:0)ChEBI
GPCho 16:0/16:0ChEBI
GPCho(16:0/16:0)ChEBI
Palmitate de colfoscerilChEBI
Palmitato de colfosceriloChEBI
PC 16:0/16:0ChEBI
PC(32:0)ChEBI
Phosphatidylcholine 16:0/16:0ChEBI
Phosphatidylcholine(16:0/16:0)ChEBI
Phosphatidylcholine(32:0)ChEBI
Colfosceril palmitic acidGenerator
Palmitic acid de colfoscerilGenerator
1,2-Dipalmitoyl-rac-glycero-3-phosphocholineHMDB
LecithinHMDB
1,2-Dihexadecanoyl-rac-glycero-3-phosphocholineHMDB
GPCho(32:0)HMDB
(R)-4-Hydroxy-N,N,N-trimethyl-10-oxo-7-[(1-oxohexadecyl)oxy]-3,5,9-trioxa-4-phosphapentacosan-1-aminium 4-oxide hydroxide inner saltHMDB
(R)-4-Hydroxy-N,N,N-trimethyl-10-oxo-7-[(1-oxohexadecyl)oxy]-3,5,9-trioxa-4-phosphapentacosan-1-aminium 4-oxide inner saltHMDB
1,2-Bis(palmitoyl)-sn-glycero-3-phosphocholineHMDB
1,2-Dihexadecanoyl-sn-glycerol-3-phosphorylcholineHMDB
1,2-Dipalmitoyl-3-sn-phosphatidylcholineHMDB
1,2-Dipalmitoyl-L-3-phosphatidylcholineHMDB
1,2-Dipalmitoyl-L-a-lecithinHMDB
1,2-Dipalmitoyl-L-a-phosphatidylcholineHMDB
1,2-Dipalmitoyl-L-alpha-lecithinHMDB
1,2-Dipalmitoyl-L-alpha-phosphatidylcholineHMDB
1,2-Dipalmitoyl-L-phosphatidylcholineHMDB
1,2-Dipalmitoyl-sn-3-glycerophosphocholineHMDB
1,2-Dipalmitoyl-sn-glycero-3-phosphorylcholineHMDB
1,2-Dipalmitoyl-sn-glycerol-3-phosphocholineHMDB
1,2-Dipalmitoyl-sn-glycerophosphocholineHMDB
1,2-Dipalmitoyl-sn-glycerophosphorylcholineHMDB
1,2-Dipalmitoyl-sn-glyceryl-3-phosphocholineHMDB
1,2-Dipalmitoyl-sn-phosphatidylcholineHMDB
1,2-Dipalmitoylglycero-3-phosphocholineHMDB
1,2-L-a-DipalmitoylphosphatidylcholineHMDB
1,2-L-alpha-DipalmitoylphosphatidylcholineHMDB
b,g-Dipalmitoyl L-a-phosphatidylcholineHMDB
b,g-Dipalmitoyl L-alpha-phosphatidylcholineHMDB
b,g-Dipalmitoyl-L-(a)-lecithinHMDB
b,g-Dipalmitoyl-L-phosphatidylcholineHMDB
Dihexadecanoyl-sn-glycero-3-phosphocholineHMDB
Dipalmitoyl L-a-phosphatidylcholineHMDB
Dipalmitoyl L-alpha-phosphatidylcholineHMDB
Dipalmitoyl-L-3-glycerylphosphorylcholineHMDB
Dipalmitoyl-L-a-lecithinHMDB
Dipalmitoyl-L-a-phosphatidylcholineHMDB
Dipalmitoyl-L-alpha-lecithinHMDB
Dipalmitoyl-L-alpha-phosphatidylcholineHMDB
Dipalmitoyl-sn-3-phosphatidylcholineHMDB
DPPCHMDB
L-1,2-Dipalmitoyl-a-lecithinHMDB
L-1,2-Dipalmitoyl-alpha-lecithinHMDB
L-1,2-DipalmitoylphosphatidylcholineHMDB
L-a-1,2-Dipalmitoyl lecithinHMDB
L-a-DipalmitoylecithinHMDB
L-a-DipalmitoyllecithinHMDB
L-a-DipalmitoylphosphatidylcholineHMDB
L-a-DPPCHMDB
L-alpha-1,2-Dipalmitoyl lecithinHMDB
L-alpha-DipalmitoylecithinHMDB
L-alpha-DipalmitoyllecithinHMDB
L-alpha-DipalmitoylphosphatidylcholineHMDB
L-alpha-DPPCHMDB
L-b,g-Dipalmitoyl-a-lecithinHMDB
L-b,g-Dipalmitoyl-a-phosphatidylcholineHMDB
L-b,g-Dipalmitoyl-alpha-lecithinHMDB
L-b,g-Dipalmitoyl-alpha-phosphatidylcholineHMDB
L-b,g-DipalmitoylphosphatidylcholineHMDB
L-Dipalmitoyl lecithinHMDB
L-DPPCHMDB
PC Aa C32:0HMDB
sn-3-DipalmitoyllecithinHMDB
1,2-Dipalmitoyl-GPCHMDB
PC(16:0/16:0)Lipid Annotator
Chemical FormulaC40H80NO8P
Average Mass734.0389 Da
Monoisotopic Mass733.56216 Da
IUPAC Name(2-{[(2R)-2,3-bis(hexadecanoyloxy)propyl phosphono]oxy}ethyl)trimethylazanium
Traditional Name(2-{[(2R)-2,3-bis(hexadecanoyloxy)propyl phosphono]oxy}ethyl)trimethylazanium
CAS Registry Number63-89-8
SMILES
[H][C@@](COC(=O)CCCCCCCCCCCCCCC)(COP([O-])(=O)OCC[N+](C)(C)C)OC(=O)CCCCCCCCCCCCCCC
InChI Identifier
InChI=1S/C40H80NO8P/c1-6-8-10-12-14-16-18-20-22-24-26-28-30-32-39(42)46-36-38(37-48-50(44,45)47-35-34-41(3,4)5)49-40(43)33-31-29-27-25-23-21-19-17-15-13-11-9-7-2/h38H,6-37H2,1-5H3/t38-/m1/s1
InChI KeyKILNVBDSWZSGLL-KXQOOQHDSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
2D NMR[1H, 13C]-HSQC NMR Spectrum (2D, 600 MHz, CDCl3, experimental)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Abelmoschus esculentusFooDB
Actinidia chinensisFooDB
Agaricus bisporusFooDB
AgaveFooDB
Allium ampeloprasumFooDB
Allium ascalonicumFooDB
Allium cepaFooDB
Allium cepa L.FooDB
Allium fistulosumFooDB
Allium sativumFooDB
Allium schoenoprasumFooDB
Allium tuberosumFooDB
Aloysia triphyllaFooDB
AmaranthusFooDB
Amelanchier alnifoliaFooDB
Anacardium occidentaleFooDB
Ananas comosusFooDB
Anethum graveolensFooDB
Angelica keiskeiFooDB
Annona cherimolaFooDB
Annona muricataFooDB
Annona reticulataFooDB
Annona squamosaFooDB
Anthriscus cerefoliumFooDB
Apium graveolensFooDB
Apium graveolens var. dulceFooDB
Apium graveolens var. rapaceumFooDB
Apium graveolens var. secalinumFooDB
Arachis hypogaeaFooDB
Arctium lappaFooDB
Armoracia rusticanaFooDB
Artemisia dracunculusFooDB
Artemisia vulgarisFooDB
Artocarpus altilisFooDB
Artocarpus heterophyllusFooDB
Asparagus officinalisFooDB
Attalea speciosaFooDB
Auricularia auricula-judaeFooDB
Auricularia polytrichaFooDB
Avena sativa L.FooDB
Averrhoa carambolaFooDB
Basella albaFooDB
Benincasa hispidaFooDB
Bertholletia excelsaFooDB
Beta vulgarisFooDB
Beta vulgaris ssp. ciclaFooDB
Borago officinalisFooDB
Brassica alboglabraFooDB
Brassica junceaFooDB
Brassica napusFooDB
Brassica napus var. napusFooDB
Brassica oleraceaFooDB
Brassica oleracea var. botrytisFooDB
Brassica oleracea var. capitataFooDB
Brassica oleracea var. gemmiferaFooDB
Brassica oleracea var. gongylodesFooDB
Brassica oleracea var. italicaFooDB
Brassica oleracea var. sabaudaFooDB
Brassica oleracea var. viridisFooDB
Brassica rapaFooDB
Brassica rapa ssp. chinensisFooDB
Brassica rapa var. pekinensisFooDB
Brassica rapa var. rapaFooDB
Brassica ruvoFooDB
Brosimum alicastrumFooDB
Byrsonima crassifoliaFooDB
Cajanus cajanFooDB
Canarium ovatumFooDB
Cannabis sativaCannabisDB
      Not Available
Cantharellus cibariusFooDB
Capparis spinosaFooDB
Capsicum annuumFooDB
Capsicum annuum L.FooDB
Capsicum annuum var. annuumFooDB
Capsicum chinenseFooDB
Capsicum pubescensFooDB
Carica papaya L.FooDB
Carissa macrocarpaFooDB
Carthamus tinctoriusFooDB
Carum carviFooDB
CaryaFooDB
Carya illinoinensisFooDB
CastaneaFooDB
Castanea crenataFooDB
Castanea mollissimaFooDB
Castanea sativaFooDB
Ceratonia siliquaFooDB
Chamaemelum nobileFooDB
Chamerion angustifoliumFooDB
Chenopodium albumFooDB
Chenopodium quinoaFooDB
Chrysanthemum coronariumFooDB
Cicer arietinumFooDB
Cichorium endiviaFooDB
Cichorium intybusFooDB
CinnamomumFooDB
Cinnamomum aromaticumFooDB
Cinnamomum verumFooDB
CirsiumFooDB
Citrullus lanatusFooDB
Citrus ×limon (L.) Burm. f. (pro sp.)FooDB
Citrus aurantiifoliaFooDB
Citrus latifoliaFooDB
Citrus limonFooDB
Citrus maximaFooDB
Citrus paradisiFooDB
Citrus reticulataFooDB
Citrus X sinensis (L.) Osbeck (pro. sp.)FooDB
Cocos nuciferaFooDB
Coffea arabica L.FooDB
Coffea canephoraFooDB
Colocasia esculentaFooDB
Corchorus olitoriusFooDB
Coriandrum sativum L.FooDB
CorylusFooDB
Corylus avellanaFooDB
Crateva religiosaFooDB
Crocus sativusFooDB
Cucumis meloFooDB
Cucumis metuliferusFooDB
Cucumis sativus L.FooDB
CucurbitaFooDB
Cucurbita maximaFooDB
Cucurbita moschataFooDB
Cuminum cyminumFooDB
Curcuma longaFooDB
Cydonia oblongaFooDB
Cymbopogon citratusFooDB
Cynara cardunculusFooDB
Cynara scolymusFooDB
Daucus carotaFooDB
Daucus carota ssp. sativusFooDB
Dimocarpus longanFooDB
DioscoreaFooDB
Dioscorea pentaphyllaFooDB
DiospyrosFooDB
Diospyros kakiFooDB
Diospyros virginianaFooDB
Durio zibethinusFooDB
Dysphania ambrosioidesFooDB
ElaeisFooDB
Eleocharis dulcisFooDB
Elettaria cardamomumFooDB
Empetrum nigrumFooDB
Eragrostis tefFooDB
Eriobotrya japonicaFooDB
Eruca vesicaria subsp. SativaFooDB
Eugenia javanicaFooDB
Eugenia unifloraFooDB
Eutrema japonicumFooDB
Fagopyrum esculentumFooDB
Fagopyrum tataricumFooDB
FagusFooDB
Feijoa sellowianaFooDB
Ficus caricaFooDB
Flammulina velutipesFooDB
Foeniculum vulgareFooDB
Fragaria x ananassaFooDB
Garcinia mangostanaFooDB
Gaylussacia baccataFooDB
Ginkgo bilobaFooDB
Glycine maxFooDB
GossypiumFooDB
Grifola frondosaFooDB
Hedysarum alpinumFooDB
Helianthus annuus L.FooDB
Helianthus tuberosusFooDB
Hibiscus sabbariffaFooDB
Hippophae rhamnoidesFooDB
Homo sapiensLOTUS Database
Hordeum vulgareFooDB
Hyssopus officinalis L.FooDB
Illicium verumFooDB
Ipomoea aquaticaFooDB
Ipomoea batatasFooDB
JuglansFooDB
Juglans ailanthifoliaFooDB
Juglans cinereaFooDB
Juglans nigra L.FooDB
Juglans regiaFooDB
Lablab purpureusFooDB
Lactuca sativaFooDB
Lagenaria sicerariaFooDB
Lathyrus sativusFooDB
Laurus nobilis L.FooDB
Lens culinarisFooDB
Lentinus edodesFooDB
Lepidium sativumFooDB
Levisticum officinaleFooDB
Linum usitatissimumFooDB
Litchi chinensisFooDB
Luffa aegyptiacaFooDB
LupinusFooDB
Lupinus albusFooDB
Lycoris radiataLOTUS Database
MacadamiaFooDB
Macadamia tetraphyllaFooDB
Malpighia emarginataFooDB
MalusFooDB
Malus pumilaFooDB
Mammea americanaFooDB
Mangifera indicaFooDB
Manihot esculentaFooDB
Manilkara zapotaFooDB
Maranta arundinaceaFooDB
Matricaria recutitaFooDB
Matteuccia struthiopterisFooDB
Medicago sativaFooDB
Melissa officinalis L.FooDB
MenthaFooDB
Mentha aquaticaFooDB
Mentha arvensisFooDB
Mentha spicataFooDB
Mentha x piperitaFooDB
Mespilus germanicaFooDB
Metroxylon saguFooDB
Momordica charantiaFooDB
MorchellaceaeFooDB
Morella rubraFooDB
Moringa oleiferaFooDB
MorusFooDB
Morus nigraFooDB
Musa acuminataFooDB
Musa x paradisiacaFooDB
MyricaFooDB
Myristica fragransFooDB
NelumboFooDB
Nelumbo nuciferaFooDB
Nephelium lappaceumFooDB
Nuphar luteaFooDB
Ocimum basilicumFooDB
Oenothera biennisFooDB
Olea europaeaFooDB
OpuntiaFooDB
Opuntia cochenilliferaFooDB
Opuntia macrorhizaFooDB
Origanum majoranaFooDB
Origanum onitesFooDB
Origanum vulgareFooDB
Origanum X majoricumFooDB
Oryza rufipogonFooDB
Oryza sativaFooDB
Pachyrhizus erosusFooDB
Panax ginsengFooDB
Pangium eduleFooDB
Panicum miliaceumFooDB
Passiflora edulisFooDB
Pastinaca sativaFooDB
Pediomelum esculentumFooDB
Perideridia oreganaFooDB
Persea americanaFooDB
Petasites japonicusFooDB
Petroselinum crispumFooDB
Phaseolus coccineusFooDB
Phaseolus lunatusFooDB
Phaseolus vulgarisFooDB
Phoenix dactyliferaFooDB
Photinia melanocarpaFooDB
Phyllostachys edulisFooDB
PhysalisFooDB
Physalis philadelphica var. immaculataFooDB
Phytolacca americanaFooDB
Pimenta dioicaFooDB
Pimpinella anisumFooDB
PinusFooDB
Pinus edulisFooDB
Piper nigrum L.FooDB
Pistacia veraFooDB
Pisum sativumFooDB
Pleurotus ostreatusFooDB
Polygonum alpinumFooDB
Portulaca oleraceaFooDB
Pouteria sapotaFooDB
Prunus armeniacaFooDB
Prunus aviumFooDB
Prunus avium L.FooDB
Prunus cerasusFooDB
Prunus domesticaFooDB
Prunus dulcisFooDB
Prunus persicaFooDB
Prunus persica var. nucipersicaFooDB
Prunus persica var. persicaFooDB
Prunus tomentosaFooDB
Prunus virginianaFooDB
Psidium cattleianumFooDB
Psidium guajavaFooDB
Psophocarpus tetragonolobusFooDB
Punica granatumFooDB
Pyrus communisFooDB
Pyrus pyrifoliaFooDB
QuercusFooDB
Raphanus sativusFooDB
Raphanus sativus var. longipinnatusFooDB
Raphanus sativus var. sativusFooDB
Rheum rhabarbarumFooDB
Ribes aureumFooDB
Ribes glandulosumFooDB
Ribes nigrumFooDB
Ribes rubrumFooDB
Ribes uva-crispaFooDB
RosaFooDB
Rubus arcticusFooDB
Rubus chamaemorusFooDB
Rubus idaeusFooDB
Rubus occidentalisFooDB
Rubus spectabilisFooDB
RumexFooDB
Rumex acetosaFooDB
Rumex articusFooDB
Sagittaria latifoliaFooDB
Salix pulchraFooDB
Salvia elegansFooDB
Salvia hispanicaFooDB
Salvia officinalisFooDB
Salvia rosmarinusFooDB
Sambucus nigraFooDB
Sambucus nigra L.FooDB
Satureja hortensis L.FooDB
Satureja montanaFooDB
Scorzonera hispanicaFooDB
Secale cerealeFooDB
Sechium eduleFooDB
Sesamum indicumFooDB
Sesbania bispinosaFooDB
Sinapis albaFooDB
SisymbriumFooDB
Solanum lycopersicumFooDB
Solanum lycopersicum var. cerasiformeFooDB
Solanum lycopersicum var. lycopersicumFooDB
Solanum melongenaFooDB
Solanum quitoenseFooDB
Solanum tuberosumFooDB
Sorbus aucupariaFooDB
Sorghum bicolorFooDB
Spinacia oleraceaFooDB
Syzygium aromaticumFooDB
Syzygium cuminiFooDB
Syzygium jambosFooDB
Tamarindus indicaFooDB
Taraxacum officinaleFooDB
Tetragonia tetragonioidesFooDB
ThelespermaFooDB
Thymus pulegioidesFooDB
Thymus vulgarisFooDB
Tilia cordataFooDB
Tilia L.FooDB
Tragopogon porrifoliusFooDB
Trigonella foenum-graecumFooDB
TriticumFooDB
Triticum aestivumFooDB
Triticum durumFooDB
Triticum speltaFooDB
Triticum turanicumFooDB
Trypanosoma bruceiLOTUS Database
Typha angustifoliaFooDB
VacciniumFooDB
Vaccinium angustifoliumFooDB
Vaccinium angustifolium X Vaccinium corymbosumFooDB
Vaccinium arboreumFooDB
Vaccinium corymbosumFooDB
Vaccinium deliciosumFooDB
Vaccinium elliottiiFooDB
Vaccinium macrocarponFooDB
Vaccinium myrtilloidesFooDB
Vaccinium myrtillusFooDB
Vaccinium ovalifoliumFooDB
Vaccinium ovatumFooDB
Vaccinium oxycoccosFooDB
Vaccinium parvifoliumFooDB
Vaccinium reticulatumFooDB
Vaccinium stamineumFooDB
Vaccinium uliginosumFooDB
Vaccinium vitis-idaeaFooDB
Valerianella locustaFooDB
VanillaFooDB
Verbena officinalisFooDB
Viburnum eduleFooDB
Vicia fabaFooDB
Vigna aconitifoliaFooDB
Vigna angularisFooDB
Vigna mungoFooDB
Vigna radiataFooDB
Vigna umbellataFooDB
Vigna unguiculataFooDB
Vigna unguiculata ssp. cylindricaFooDB
Vigna unguiculata ssp. unguiculataFooDB
Vigna unguiculata var. sesquipedalisFooDB
VitisFooDB
Vitis aestivalisFooDB
Vitis labruscaFooDB
Vitis rotundifoliaFooDB
Vitis vinifera L.FooDB
Xanthosoma sagittifoliumFooDB
Zea mays L.FooDB
Zingiber officinaleFooDB
ZizaniaFooDB
Zizania aquaticaFooDB
Ziziphus zizyphusFooDB
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phosphatidylcholines. These are glycerophosphocholines in which the two free -OH are attached to one fatty acid each through an ester linkage.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassGlycerophospholipids
Sub ClassGlycerophosphocholines
Direct ParentPhosphatidylcholines
Alternative Parents
Substituents
  • Diacylglycero-3-phosphocholine
  • Phosphocholine
  • Fatty acid ester
  • Dialkyl phosphate
  • Dicarboxylic acid or derivatives
  • Organic phosphoric acid derivative
  • Phosphoric acid ester
  • Alkyl phosphate
  • Fatty acyl
  • Quaternary ammonium salt
  • Tetraalkylammonium salt
  • Carboxylic acid ester
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic nitrogen compound
  • Carbonyl group
  • Organooxygen compound
  • Organonitrogen compound
  • Organic oxide
  • Organopnictogen compound
  • Amine
  • Organic salt
  • Hydrocarbon derivative
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External Descriptors
Physical Properties
StateSolid
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
Water Solubility2.4e-05 g/LALOGPS
logP5.29ALOGPS
logP8.11ChemAxon
logS-7.5ALOGPS
pKa (Strongest Acidic)1.86ChemAxon
pKa (Strongest Basic)-6.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area111.19 ŲChemAxon
Rotatable Bond Count40ChemAxon
Refractivity215.87 m³·mol⁻¹ChemAxon
Polarizability92 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDHMDB0000564
DrugBank IDDB09114
Phenol Explorer Compound IDNot Available
FoodDB IDFDB022121
KNApSAcK IDNot Available
Chemspider ID398235
KEGG Compound IDC00157
BioCyc ID1-2-DIPALMITOYLPHOSPHATIDYLCHOLINE
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN ID5548
PubChem Compound452110
PDB IDNot Available
ChEBI ID72999
Good Scents IDNot Available
References
General References
  1. Elshenawy S, Pinney SE, Stuart T, Doulias PT, Zura G, Parry S, Elovitz MA, Bennett MJ, Bansal A, Strauss JF 3rd, Ischiropoulos H, Simmons RA: The Metabolomic Signature of the Placenta in Spontaneous Preterm Birth. Int J Mol Sci. 2020 Feb 4;21(3). pii: ijms21031043. doi: 10.3390/ijms21031043. [PubMed:32033212 ]
  2. Li X, Kypreos K, Zanni EE, Zannis V: Domains of apoE required for binding to apoE receptor 2 and to phospholipids: implications for the functions of apoE in the brain. Biochemistry. 2003 Sep 9;42(35):10406-17. doi: 10.1021/bi027093c. [PubMed:12950167 ]
  3. Sosnowski TR, Kolinski M, Gradon L: Alteration of surface properties of dipalmitoyl phosphatidylcholine by benzo[a]pyrene: a model of pulmonary effects of diesel exhaust inhalation. J Biomed Nanotechnol. 2012 Oct;8(5):818-25. doi: 10.1166/jbn.2012.1436. [PubMed:22888753 ]