Np mrd loader

Showing NP-Card for norajmaline (NP0339637)

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Record Information
Version2.0
Created at2024-09-11 22:49:13 UTC
Updated at2024-09-11 22:49:13 UTC
NP-MRD IDNP0339637
Secondary Accession NumbersNone
Natural Product Identification
Common Namenorajmaline
Description norajmaline was first documented in 2023 (PMID: 37393246). Based on a literature review very few articles have been published on norajmaline.
Structure
Thumb
MOLSDFPDBSMILESInChI

MOL for NP0339637 (norajmaline)


  Mrv2104 05272301212D          

 23 28  0  0  0  0            999 V2000
   -1.2724    0.6461    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4772    0.8658    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1106    0.2870    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9791    0.1877    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9515    1.0223    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5871    0.4291    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4498    0.5739    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0204    1.2285    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.6572    0.6743    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4211    0.9859    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0729    0.4801    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9608   -0.3372    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1969   -0.6488    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5451   -0.1430    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6786   -0.2627    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1182   -1.0762    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3140   -1.1684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7535   -0.4514    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6022   -0.9752    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9651   -1.7161    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0676   -0.3823    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.2173   -0.5325    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2709   -1.1975    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
  9 14  1  0  0  0  0
 14 15  1  0  0  0  0
  7 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
  4 18  1  0  0  0  0
 18 19  1  0  0  0  0
 15 19  1  0  0  0  0
 19 20  1  0  0  0  0
 17 21  1  0  0  0  0
  6 21  1  0  0  0  0
 21 22  1  0  0  0  0
  3 22  1  0  0  0  0
 22 23  1  0  0  0  0
M  END
Download

3D MOL for NP0339637 (norajmaline)

Download
3D SDF for NP0339637 (norajmaline)

  Mrv2104 05272301212D          

 23 28  0  0  0  0            999 V2000
   -1.2724    0.6461    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4772    0.8658    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1106    0.2870    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9791    0.1877    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9515    1.0223    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5871    0.4291    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4498    0.5739    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0204    1.2285    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.6572    0.6743    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4211    0.9859    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0729    0.4801    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9608   -0.3372    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1969   -0.6488    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5451   -0.1430    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6786   -0.2627    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1182   -1.0762    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3140   -1.1684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7535   -0.4514    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6022   -0.9752    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9651   -1.7161    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0676   -0.3823    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.2173   -0.5325    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2709   -1.1975    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
  9 14  1  0  0  0  0
 14 15  1  0  0  0  0
  7 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
  4 18  1  0  0  0  0
 18 19  1  0  0  0  0
 15 19  1  0  0  0  0
 19 20  1  0  0  0  0
 17 21  1  0  0  0  0
  6 21  1  0  0  0  0
 21 22  1  0  0  0  0
  3 22  1  0  0  0  0
 22 23  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0339637

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCC1C(O)N2C3CC45C(O)C3C1CC2C4NC1=CC=CC=C51

> <INCHI_IDENTIFIER>
InChI=1/C19H24N2O2/c1-2-9-10-7-13-16-19(11-5-3-4-6-12(11)20-16)8-14(15(10)17(19)22)21(13)18(9)23/h3-6,9-10,13-18,20,22-23H,2,7-8H2,1H3

> <INCHI_KEY>
HIOAYNMZFIHQNS-UHFFFAOYNA-N

> <FORMULA>
C19H24N2O2

> <MOLECULAR_WEIGHT>
312.413

> <EXACT_MASS>
312.183778021

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
47

> <JCHEM_AVERAGE_POLARIZABILITY>
34.61096470695324

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
13-ethyl-8,15-diazahexacyclo[14.2.1.0^{1,9}.0^{2,7}.0^{10,15}.0^{12,17}]nonadeca-2,4,6-triene-14,18-diol

> <JCHEM_LOGP>
1.2155420556666663

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA>
14.33118206530321

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.280390285454535

> <JCHEM_PKA_STRONGEST_BASIC>
7.019399405233089

> <JCHEM_POLAR_SURFACE_AREA>
55.730000000000004

> <JCHEM_REFRACTIVITY>
88.331

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
13-ethyl-8,15-diazahexacyclo[14.2.1.0^{1,9}.0^{2,7}.0^{10,15}.0^{12,17}]nonadeca-2,4,6-triene-14,18-diol

> <JCHEM_VEBER_RULE>
0

$$$$

Download
3D-SDF for NP0339637 (norajmaline)
Download
PDB for NP0339637 (norajmaline)
HEADER    PROTEIN                                 27-MAY-23   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   27-MAY-23         0                                  
HETATM    1  C   UNK     0      -2.375   1.206   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -0.891   1.616   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       0.207   0.536   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.828   0.350   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.776   1.908   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.963   0.801   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       4.573   1.071   0.000  0.00  0.00           C+0
HETATM    8  N   UNK     0       5.638   2.293   0.000  0.00  0.00           N+0
HETATM    9  C   UNK     0       6.827   1.259   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       8.253   1.840   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       9.469   0.896   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       9.260  -0.629   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       7.834  -1.211   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       6.618  -0.267   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       5.000  -0.490   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       3.954  -2.009   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       2.453  -2.181   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.273  -0.843   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       4.857  -1.820   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       5.535  -3.203   0.000  0.00  0.00           O+0
HETATM   21  N   UNK     0       1.993  -0.714   0.000  0.00  0.00           N+0
HETATM   22  C   UNK     0       0.406  -0.994   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      -0.506  -2.235   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   22                                                  
CONECT    4    3    5   18                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7   21                                                  
CONECT    7    6    8   15                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10   14                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13    9   15                                                  
CONECT   15   14    7   16   19                                             
CONECT   16   15   17                                                       
CONECT   17   16   18   21                                                  
CONECT   18   17    4   19                                                  
CONECT   19   18   15   20                                                  
CONECT   20   19                                                            
CONECT   21   17    6   22                                                  
CONECT   22   21    3   23                                                  
CONECT   23   22                                                            
MASTER        0    0    0    0    0    0    0    0   23    0   56    0
END

Download
3D PDB for NP0339637 (norajmaline)
Download
SMILES for NP0339637 (norajmaline)
CCC1C(O)N2C3CC45C(O)C3C1CC2C4NC1=CC=CC=C51
Download
INCHI for NP0339637 (norajmaline)
InChI=1/C19H24N2O2/c1-2-9-10-7-13-16-19(11-5-3-4-6-12(11)20-16)8-14(15(10)17(19)22)21(13)18(9)23/h3-6,9-10,13-18,20,22-23H,2,7-8H2,1H3
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View in JSmol
SynonymsNot Available
Chemical FormulaC19H24N2O2
Average Mass312.4130 Da
Monoisotopic Mass312.18378 Da
IUPAC Name13-ethyl-8,15-diazahexacyclo[14.2.1.0^{1,9}.0^{2,7}.0^{10,15}.0^{12,17}]nonadeca-2,4,6-triene-14,18-diol
Traditional Name13-ethyl-8,15-diazahexacyclo[14.2.1.0^{1,9}.0^{2,7}.0^{10,15}.0^{12,17}]nonadeca-2,4,6-triene-14,18-diol
CAS Registry NumberNot Available
SMILES
CCC1C(O)N2C3CC45C(O)C3C1CC2C4NC1=CC=CC=C51
InChI Identifier
InChI=1/C19H24N2O2/c1-2-9-10-7-13-16-19(11-5-3-4-6-12(11)20-16)8-14(15(10)17(19)22)21(13)18(9)23/h3-6,9-10,13-18,20,22-23H,2,7-8H2,1H3
InChI KeyHIOAYNMZFIHQNS-UHFFFAOYNA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of OriginNot Available
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.22ChemAxon
pKa (Strongest Acidic)13.28ChemAxon
pKa (Strongest Basic)7.02ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area55.73 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity88.33 m³·mol⁻¹ChemAxon
Polarizability34.61 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Nyambo K, Adu-Amankwaah F, Tapfuma KI, Baatjies L, Julius L, Smith L, Ngxande M, Govender K, Mabasa L, Traore A, Masiphephethu MV, Niang IS, Mavumengwana V: In-silico and in-vitro assessments of some fabaceae, rhamnaceae, apocynaceae, and anacardiaceae species against Mycobacterium tuberculosis H37Rv and triple-negative breast cancer cells. BMC Complement Med Ther. 2023 Jul 1;23(1):219. doi: 10.1186/s12906-023-04041-5. [PubMed:37393246  ]