NP-MRD: Showing NP-Card for Streptomycarbazole B (NP0333381)

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Record Information

Version

2.0

Created at

2024-06-06 03:50:29 UTC

Updated at

2024-09-16 20:04:16 UTC

NP-MRD ID

NP0333381

Natural Product DOI

https://doi.org/10.57994/2759

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Streptomycarbazole B

Description

Streptomycarbazole B belongs to the class of organic compounds known as carbazoles. Carbazoles are compounds containing a three ring system containing a pyrrole ring fused on either side to a benzene ring. Based on a literature review very few articles have been published on Streptomycarbazole B.

Structure

MOL SDF PDB SMILES InChI


  Mrv2104 02182306262D          

 18 21  0  0  0  0            999 V2000
    5.3279    1.0022    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5574    0.7073    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9168    1.2272    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1463    0.9324    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    4.4274   -0.1074    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6569   -0.4022    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0163    0.1177    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2458   -0.1772    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1159   -0.9919    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7565   -1.5118    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5270   -1.2169    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3009   -1.1201    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.9272   -0.3846    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1305   -0.1702    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0822    0.6269    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5018    1.2096    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2984    0.9952    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5111    0.1981    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  2  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  4  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
  6 11  1  0  0  0  0
  9 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 13 18  1  0  0  0  0
  8 18  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0333381

> <DATABASE_NAME>
NP-MRD

> <SMILES>
OC1CSC2=C(O1)C=CC1=C2C2=CC=CC=C2N1

> <INCHI_IDENTIFIER>
InChI=1/C14H11NO2S/c16-12-7-18-14-11(17-12)6-5-10-13(14)8-3-1-2-4-9(8)15-10/h1-6,12,15-16H,7H2

> <INCHI_KEY>
IJMUIERIXVJAPJ-UHFFFAOYNA-N

> <FORMULA>
C14H11NO2S

> <MOLECULAR_WEIGHT>
257.31

> <EXACT_MASS>
257.051049772

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
29

> <JCHEM_AVERAGE_POLARIZABILITY>
27.099205992413577

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
2H,3H,7H-[1,4]oxathiino[2,3-c]carbazol-3-ol

> <JCHEM_LOGP>
2.5372957866666663

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.097042459913277

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.839703708566129

> <JCHEM_PKA_STRONGEST_BASIC>
-4.180993960185421

> <JCHEM_POLAR_SURFACE_AREA>
45.25

> <JCHEM_REFRACTIVITY>
72.06880000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
2H,3H,7H-[1,4]oxathiino[2,3-c]carbazol-3-ol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 18-FEB-23   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   18-FEB-23         0                                  
HETATM    1  O   UNK     0       9.945   1.871   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0       8.507   1.320   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       7.311   2.291   0.000  0.00  0.00           C+0
HETATM    4  S   UNK     0       5.873   1.740   0.000  0.00  0.00           S+0
HETATM    5  O   UNK     0       8.265  -0.200   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       6.826  -0.751   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.630   0.220   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       4.192  -0.331   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       3.950  -1.852   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       5.145  -2.822   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       6.584  -2.272   0.000  0.00  0.00           C+0
HETATM   12  N   UNK     0       2.428  -2.091   0.000  0.00  0.00           N+0
HETATM   13  C   UNK     0       1.731  -0.718   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       0.244  -0.318   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -0.153   1.170   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.937   2.258   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       2.424   1.858   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       2.821   0.370   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    5                                                  
CONECT    3    2    4                                                       
CONECT    4    3    7                                                       
CONECT    5    2    6                                                       
CONECT    6    5    7   11                                                  
CONECT    7    6    4    8                                                  
CONECT    8    7    9   18                                                  
CONECT    9    8   10   12                                                  
CONECT   10    9   11                                                       
CONECT   11   10    6                                                       
CONECT   12    9   13                                                       
CONECT   13   12   14   18                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   13    8                                                  
MASTER        0    0    0    0    0    0    0    0   18    0   42    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₄H₁₁NO₂S

Average Mass

257.3100 Da

Monoisotopic Mass

257.05105 Da

IUPAC Name

2H,3H,7H-[1,4]oxathiino[2,3-c]carbazol-3-ol

Traditional Name

2H,3H,7H-[1,4]oxathiino[2,3-c]carbazol-3-ol

CAS Registry Number

Not Available

SMILES

OC1CSC2=C(O1)C=CC1=C2C2=CC=CC=C2N1

InChI Identifier

InChI=1/C14H11NO2S/c16-12-7-18-14-11(17-12)6-5-10-13(14)8-3-1-2-4-9(8)15-10/h1-6,12,15-16H,7H2

InChI Key

IJMUIERIXVJAPJ-UHFFFAOYNA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, C2D6OS, experimental)	17854207085@163.com	Ocean university of China	Yan Pengcheng	2024-06-06	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹H NMR Spectrum (1D, 400, C2D6OS, simulated)	17854207085@163.com	Ocean university of China	Yan Pengcheng	2024-06-06	View Spectrum

Species

Species of Origin

Species Name	Source	Reference
sp.		Not Available

Chemical Taxonomy

Description

This compound belongs to the class of organic compounds known as carbazoles. These are compounds containing a three ring system containing a pyrrole ring fused on either side to a benzene ring.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Indoles and derivatives

Sub Class

Carbazoles

Direct Parent

Carbazoles

Alternative Parents

Substituents

Carbazole
Indole
Aryl thioether
Alkylarylthioether
Benzenoid
1,4-oxathiin
1,4-benzooxathiin
Heteroaromatic compound
Pyrroline
Pyrrole
Thioenolether
Oxacycle
Azacycle
Sulfenyl compound
Thioether
Secondary amine
Secondary aliphatic amine
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Hydrocarbon derivative
Organosulfur compound
Organooxygen compound
Organonitrogen compound
Amine
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.54	ChemAxon
pKa (Strongest Acidic)	11.84	ChemAxon
pKa (Strongest Basic)	-4.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	45.25 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	72.07 m³·mol⁻¹	ChemAxon
Polarizability	27.1 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for Streptomycarbazole B (NP0333381)

MOL for NP0333381 (Streptomycarbazole B)

3D MOL for NP0333381 (Streptomycarbazole B)

3D SDF for NP0333381 (Streptomycarbazole B)

3D-SDF for NP0333381 (Streptomycarbazole B)

PDB for NP0333381 (Streptomycarbazole B)

3D PDB for NP0333381 (Streptomycarbazole B)

SMILES for NP0333381 (Streptomycarbazole B)

INCHI for NP0333381 (Streptomycarbazole B)

Structure for NP0333381 (Streptomycarbazole B)

3D Structure for NP0333381 (Streptomycarbazole B)