Np mrd loader

Record Information
Version2.0
Created at2023-12-01 20:01:23 UTC
Updated at2024-09-03 04:18:19 UTC
NP-MRD IDNP0332185
Natural Product DOIhttps://doi.org/10.57994/1354
Secondary Accession NumbersNone
Natural Product Identification
Common NameCaulamidine B
DescriptionCaulamidine B belongs to the class of organic compounds known as aminoquinolines and derivatives. These are organic compounds containing an amino group attached to a quinoline ring system. Caulamidine B was first documented in 2018 (PMID: 29619201). Based on a literature review very few articles have been published on Caulamidine B (PMID: 37368408).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC23H21Br2ClN4
Average Mass548.7100 Da
Monoisotopic Mass545.98215 Da
IUPAC Name(1R,13S,14S)-6,18-dibromo-13-chloro-11,23-dimethyl-9,11,21,23-tetraazahexacyclo[12.11.0.0^{1,10}.0^{3,8}.0^{14,22}.0^{15,20}]pentacosa-3(8),4,6,9,15(20),16,18,21-octaene
Traditional Name(1R,13S,14S)-6,18-dibromo-13-chloro-11,23-dimethyl-9,11,21,23-tetraazahexacyclo[12.11.0.0^{1,10}.0^{3,8}.0^{14,22}.0^{15,20}]pentacosa-3(8),4,6,9,15(20),16,18,21-octaene
CAS Registry NumberNot Available
SMILES
CN1CC[C@@]23CC4=C(C=C(Br)C=C4)N=C2N(C)C[C@@H](Cl)[C@]32C1=NC1=C2C=CC(Br)=C1
InChI Identifier
InChI=1S/C23H21Br2ClN4/c1-29-8-7-22-11-13-3-4-14(24)9-17(13)27-20(22)30(2)12-19(26)23(22)16-6-5-15(25)10-18(16)28-21(23)29/h3-6,9-10,19H,7-8,11-12H2,1-2H3/t19-,22-,23-/m1/s1
InChI KeyFKYDRUSZQJYVQJ-UEVCKROQSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
NOESY NMR[1H, 1H] NMR Spectrum (2D, 600 MHz, CD3OD, experimental)dongdong.wang@nih.govNCI-FrederickDong Wang2024-05-09View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, CD3OD, experimental)dongdong.wang@nih.govNCI-FrederickDong Wang2024-05-09View Spectrum
HMBC NMR[1H, 13C] NMR Spectrum (2D, 600 MHz, CD3OD, experimental)dongdong.wang@nih.govNCI-FrederickDong Wang2024-05-09View Spectrum
COSY NMR[1H, 1H] NMR Spectrum (2D, 600 MHz, CD3OD, experimental)dongdong.wang@nih.govNCI-FrederickDong Wang2024-05-09View Spectrum
HMBC NMR[1H, 15N] NMR Spectrum (2D, 600 MHz, CD3OD, experimental)dongdong.wang@nih.govNCI-FrederickDong Wang2024-05-09View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 600 MHz, CD3OD, experimental)dongdong.wang@nih.govNCI-FrederickDong Wang2024-05-09View Spectrum
HMBC NMR[1H, 15N] NMR Spectrum (2D, 600 MHz, CD3CN, experimental)dongdong.wang@nih.govNCI-FrederickDong Wang2024-05-09View Spectrum
HMBC NMR[1H, 13C] NMR Spectrum (2D, 600 MHz, CD3CN, experimental)dongdong.wang@nih.govNCI-FrederickDong Wang2024-05-09View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, CD3CN, experimental)dongdong.wang@nih.govNCI-FrederickDong Wang2024-05-09View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 600 MHz, CD3CN, experimental)dongdong.wang@nih.govNCI-FrederickDong Wang2024-05-09View Spectrum
COSY NMR[1H, 1H] NMR Spectrum (2D, 600 MHz, CD3CN, experimental)dongdong.wang@nih.govNCI-FrederickDong Wang2024-05-09View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3CN, experimental)dongdong.wang@nih.govNCI-FrederickDong Wang2024-05-09View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3OD, experimental)dongdong.wang@nih.govNCI-FrederickDong Wang2024-05-09View Spectrum
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
sp.
      Not Available
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as aminoquinolines and derivatives. These are organic compounds containing an amino group attached to a quinoline ring system.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassQuinolines and derivatives
Sub ClassAminoquinolines and derivatives
Direct ParentAminoquinolines and derivatives
Alternative Parents
Substituents
  • Aminoquinoline
  • Diazanaphthalene
  • 3-alkylindole
  • Naphthyridine
  • Azaspirodecane
  • Indole or derivatives
  • Imidolactam
  • Benzenoid
  • Piperidine
  • Azacycle
  • Bromoalkene
  • Haloalkene
  • Organic 1,3-dipolar compound
  • Propargyl-type 1,3-dipolar organic compound
  • Carboximidamide
  • Vinyl halide
  • Vinyl bromide
  • Amidine
  • Organic nitrogen compound
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Organonitrogen compound
  • Organochloride
  • Organobromide
  • Organohalogen compound
  • Alkyl halide
  • Alkyl chloride
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP5.29ChemAxon
pKa (Strongest Basic)5.28ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area31.2 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity131.92 m³·mol⁻¹ChemAxon
Polarizability50.03 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Tian X, Wang D, Jiang W, Bokesch HR, Wilson BAP, O'Keefe BR, Gustafson KR: Rare Caulamidine Hexacyclic Alkaloids from the Marine Ascidian Polyandrocarpa sp. J Nat Prod. 2023 Jul 28;86(7):1855-1861. doi: 10.1021/acs.jnatprod.3c00393. Epub 2023 Jun 27. [PubMed:37368408 ]
  2. Milanowski DJ, Oku N, Cartner LK, Bokesch HR, Williamson RT, Sauri J, Liu Y, Blinov KA, Ding Y, Li XC, Ferreira D, Walker LA, Khan S, Davies-Coleman MT, Kelley JA, McMahon JB, Martin GE, Gustafson KR: Unequivocal determination of caulamidines A and B: application and validation of new tools in the structure elucidation tool box. Chem Sci. 2017 Nov 6;9(2):307-314. doi: 10.1039/c7sc01996c. eCollection 2018 Jan 14. [PubMed:29619201 ]