NP-MRD: Showing NP-Card for Tuberostemonin (NP0138992)

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Record Information

Version

2.0

Created at

2022-06-29 19:34:50 UTC

Updated at

2022-06-29 19:34:50 UTC

NP-MRD ID

NP0138992

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Tuberostemonin

Description

10-Ethyl-14-methyl-3-(4-methyl-5-oxooxolan-2-yl)-12-oxa-4-azatetracyclo[7.6.1.0⁴,¹⁶.0¹¹,¹⁵]Hexadecan-13-one belongs to the class of organic compounds known as stichoneurine-type alkaloids. These are stemona alkaloids with a structure that typically contains a 3-methyloxolan-2-one and a 5-propyloxolan-2-one moieties that are attached to the characteristic pyrrolo[1,2-a]azepine skeleton at the C3 and C9 position, respectively. Tuberostemonin is found in Stemona japonica, Stemona mairei, Stemona sessilifolia and Stemona tuberosa. 10-Ethyl-14-methyl-3-(4-methyl-5-oxooxolan-2-yl)-12-oxa-4-azatetracyclo[7.6.1.0⁴,¹⁶.0¹¹,¹⁵]Hexadecan-13-one is a very strong basic compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv0541 04121514262D          

 27 31  0  0  0  0            999 V2000
    4.0829   -2.4871    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3558   -2.0973    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3298   -1.2727    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5586   -0.8726    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8927   -1.3596    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0968   -1.1426    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7702   -0.3850    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1589    0.3427    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9701    0.4925    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.2920    1.2522    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1139    1.1808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3000    0.3770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0218   -0.0225    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8017    0.2466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0424    1.0357    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2986   -0.4120    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1235   -0.3971    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8258   -1.0881    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0367   -0.8474    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5931   -0.0483    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8667    1.9591    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0448    2.0305    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8587    2.8342    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0991    3.1561    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5656    3.2595    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6370    4.0814    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1886    2.7187    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 14 16  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
  3 19  1  0  0  0  0
 13 19  1  0  0  0  0
 12 20  1  0  0  0  0
  4 20  1  0  0  0  0
  9 20  1  0  0  0  0
 10 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 23 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 21 27  1  0  0  0  0
M  END

     RDKit          3D

 60 64  0  0  0  0  0  0  0  0999 V2000
   -4.9254   -0.6556   -0.1400 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0614   -0.5906    1.0764 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6559   -0.2032    0.8340 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.9698   -1.1137   -0.1949 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6921   -2.4492    0.0922 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3409   -3.7806    0.3327 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2343   -3.8118    0.3395 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8005   -2.3907    0.4297 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4676   -1.4274   -0.5283 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.4981   -0.5828   -1.0112 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8396   -0.7496   -0.4181 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7171    0.4094   -0.9282 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8630    0.2299    0.0691 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.8272    1.3615    0.0473 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1044    0.0878    1.3153 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4169    0.4339    2.4694 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9072   -0.5362    0.9640 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0627    0.8811   -0.8401 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4423    0.7847   -0.8902 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1972    1.7300    0.0108 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.5667    3.0360   -0.5883 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6147    4.1540   -0.2999 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8298    3.3353    0.1890 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4331    4.4357    0.2316 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2310    2.1696    0.8688 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5951    1.1337    0.2203 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5475   -0.4447   -0.1377 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.8221    0.0165   -0.0117 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3820   -1.6750   -0.3002 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4502   -0.3482   -1.0714 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4971    0.1087    1.8082 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0551   -1.6293    1.5217 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1046   -0.2092    1.7786 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4731   -0.8419   -1.1475 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1776   -2.1489    1.0663 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0796   -2.4990   -0.8782 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6254   -4.5694   -0.4281 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7090   -4.2609    1.2832 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5836   -4.3274    1.2295 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5964   -4.2437   -0.5984 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7926   -2.0286    1.5031 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9129   -2.6003    0.2907 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5815   -0.7267   -2.1121 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3832   -1.6594   -0.7589 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0652    0.2214   -1.9450 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2078    1.3793   -0.7829 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3500   -0.7264   -0.1693 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3524    2.3376   -0.1046 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4103    1.3394    0.9942 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5743    1.1548   -0.7608 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3831    1.2613    0.1280 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3751    1.4818   -1.7109 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8446    0.7137   -1.8996 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6558    1.8411    0.9488 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7739    3.0010   -1.6680 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1932    5.1137   -0.4376 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2240    4.1095   -1.0225 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2850    4.1638    0.7519 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0220    1.0867   -0.8262 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2779   -0.2823    0.9524 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3 26  1  0
 26 25  1  0
 25 23  1  0
 23 24  2  0
 23 21  1  0
 21 22  1  0
 21 20  1  0
 20 19  1  0
 19 18  1  0
 18 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 13 15  1  0
 15 16  2  0
 15 17  1  0
 10  9  1  0
  9  8  1  0
  8  7  1  0
  7  6  1  0
  6  5  1  0
  5  4  1  0
  4 27  1  0
  4  3  1  0
 20 26  1  0
 27 19  1  0
 17 11  1  0
 27  9  1  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  2 31  1  0
  2 32  1  0
  3 33  1  1
 26 59  1  6
 21 55  1  6
 22 56  1  0
 22 57  1  0
 22 58  1  0
 20 54  1  1
 19 53  1  6
 18 51  1  0
 18 52  1  0
 10 43  1  6
 11 44  1  1
 12 45  1  0
 12 46  1  0
 13 47  1  6
 14 48  1  0
 14 49  1  0
 14 50  1  0
  8 41  1  0
  8 42  1  0
  7 39  1  0
  7 40  1  0
  6 37  1  0
  6 38  1  0
  5 35  1  0
  5 36  1  0
  4 34  1  6
 27 60  1  1
M  END


  Mrv0541 04121514262D          

 27 31  0  0  0  0            999 V2000
    4.0829   -2.4871    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3558   -2.0973    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3298   -1.2727    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5586   -0.8726    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8927   -1.3596    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0968   -1.1426    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7702   -0.3850    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1589    0.3427    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9701    0.4925    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.2920    1.2522    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1139    1.1808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3000    0.3770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0218   -0.0225    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8017    0.2466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0424    1.0357    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2986   -0.4120    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1235   -0.3971    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8258   -1.0881    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0367   -0.8474    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5931   -0.0483    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8667    1.9591    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0448    2.0305    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8587    2.8342    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0991    3.1561    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5656    3.2595    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6370    4.0814    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1886    2.7187    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 14 16  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
  3 19  1  0  0  0  0
 13 19  1  0  0  0  0
 12 20  1  0  0  0  0
  4 20  1  0  0  0  0
  9 20  1  0  0  0  0
 10 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 23 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 21 27  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0138992

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCC1C2OC(=O)C(C)C2C2CC(C3CC(C)C(=O)O3)N3CCCCC1C23

> <INCHI_IDENTIFIER>
InChI=1S/C22H33NO4/c1-4-13-14-7-5-6-8-23-16(17-9-11(2)21(24)26-17)10-15(19(14)23)18-12(3)22(25)27-20(13)18/h11-20H,4-10H2,1-3H3

> <INCHI_KEY>
GYOGHROCTSEKDY-UHFFFAOYSA-N

> <FORMULA>
C22H33NO4

> <MOLECULAR_WEIGHT>
375.509

> <EXACT_MASS>
375.240958547

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
60

> <JCHEM_AVERAGE_POLARIZABILITY>
42.23582004651776

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
10-ethyl-14-methyl-3-(4-methyl-5-oxooxolan-2-yl)-12-oxa-4-azatetracyclo[7.6.1.0⁴,¹⁶.0¹¹,¹⁵]hexadecan-13-one

> <ALOGPS_LOGP>
2.97

> <JCHEM_LOGP>
3.421584088333332

> <ALOGPS_LOGS>
-3.77

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_BASIC>
11.733022972989646

> <JCHEM_POLAR_SURFACE_AREA>
55.84

> <JCHEM_REFRACTIVITY>
100.50069999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
6.37e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
10-ethyl-14-methyl-3-(4-methyl-5-oxooxolan-2-yl)-12-oxa-4-azatetracyclo[7.6.1.0⁴,¹⁶.0¹¹,¹⁵]hexadecan-13-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 12-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   12-APR-15         0                                  
HETATM    1  C   UNK     0       7.621  -4.643   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       6.264  -3.915   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.216  -2.376   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.776  -1.629   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       3.533  -2.538   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.047  -2.133   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.438  -0.719   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       2.163   0.640   0.000  0.00  0.00           C+0
HETATM    9  N   UNK     0       3.678   0.919   0.000  0.00  0.00           N+0
HETATM   10  C   UNK     0       4.278   2.337   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       5.813   2.204   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.160   0.704   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       7.507  -0.042   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       8.963   0.460   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       9.413   1.933   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       9.891  -0.769   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      11.430  -0.741   0.000  0.00  0.00           O+0
HETATM   18  O   UNK     0       9.008  -2.031   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       7.535  -1.582   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       4.840  -0.090   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       3.484   3.657   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       1.950   3.790   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       1.603   5.291   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       0.185   5.891   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       2.922   6.084   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       3.056   7.619   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0       4.085   5.075   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   19                                                  
CONECT    4    3    5   20                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   20                                                  
CONECT   10    9   11   21                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13   20                                                  
CONECT   13   12   14   19                                                  
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18    3   13                                                  
CONECT   20   12    4    9                                                  
CONECT   21   10   22   27                                                  
CONECT   22   21   23                                                       
CONECT   23   22   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   21                                                       
MASTER        0    0    0    0    0    0    0    0   27    0   62    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₂H₃₃NO₄

Average Mass

375.5090 Da

Monoisotopic Mass

375.24096 Da

IUPAC Name

10-ethyl-14-methyl-3-(4-methyl-5-oxooxolan-2-yl)-12-oxa-4-azatetracyclo[7.6.1.0⁴,¹⁶.0¹¹,¹⁵]hexadecan-13-one

Traditional Name

10-ethyl-14-methyl-3-(4-methyl-5-oxooxolan-2-yl)-12-oxa-4-azatetracyclo[7.6.1.0⁴,¹⁶.0¹¹,¹⁵]hexadecan-13-one

CAS Registry Number

Not Available

SMILES

CCC1C2OC(=O)C(C)C2C2CC(C3CC(C)C(=O)O3)N3CCCCC1C23

InChI Identifier

InChI=1S/C22H33NO4/c1-4-13-14-7-5-6-8-23-16(17-9-11(2)21(24)26-17)10-15(19(14)23)18-12(3)22(25)27-20(13)18/h11-20H,4-10H2,1-3H3

InChI Key

GYOGHROCTSEKDY-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Stemona japonica	LOTUS Database	35616633
Stemona mairei	LOTUS Database	35616633
Stemona sessilifolia	LOTUS Database	35616633
Stemona tuberosa	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as stichoneurine-type alkaloids. These are stemona alkaloids with a structure that typically contains a 3-methyloxolan-2-one and a 5-propyloxolan-2-one moieties that are attached to the characteristic pyrrolo[1,2-a]azepine skeleton at the C3 and C9 position, respectively.

Kingdom

Organic compounds

Super Class

Alkaloids and derivatives

Class

Stemona alkaloids

Sub Class

Stemoamide-type alkaloids

Direct Parent

Stichoneurine-type alkaloids

Alternative Parents

Substituents

Stichoneurine-type alkaloid
Stenine backbone
Indole or derivatives
Azepane
Dicarboxylic acid or derivatives
Gamma butyrolactone
N-alkylpyrrolidine
Pyrrolidine
Tetrahydrofuran
Amino acid or derivatives
Carboxylic acid ester
Lactone
Tertiary amine
Tertiary aliphatic amine
Carboxylic acid derivative
Oxacycle
Azacycle
Organoheterocyclic compound
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Organic oxide
Organopnictogen compound
Organic oxygen compound
Amine
Organic nitrogen compound
Carbonyl group
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.97	ALOGPS
logP	3.42	ChemAxon
logS	-3.8	ALOGPS
pKa (Strongest Basic)	11.73	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	55.84 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	100.5 m³·mol⁻¹	ChemAxon
Polarizability	42.24 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

435242

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Not Available

Showing NP-Card for Tuberostemonin (NP0138992)

MOL for NP0138992 (Tuberostemonin)

3D MOL for NP0138992 (Tuberostemonin)

3D SDF for NP0138992 (Tuberostemonin)

3D-SDF for NP0138992 (Tuberostemonin)

PDB for NP0138992 (Tuberostemonin)

3D PDB for NP0138992 (Tuberostemonin)

SMILES for NP0138992 (Tuberostemonin)

INCHI for NP0138992 (Tuberostemonin)

Structure for NP0138992 (Tuberostemonin)

3D Structure for NP0138992 (Tuberostemonin)