Np mrd loader

Record Information
Version2.0
Created at2022-04-28 18:54:52 UTC
Updated at2022-04-28 18:54:52 UTC
NP-MRD IDNP0073690
Secondary Accession NumbersNone
Natural Product Identification
Common NamePyramidatine
DescriptionPyramidatine belongs to the class of organic compounds known as cinnamic acid amides. These are amides of cinnamic acids. Cinnamic acid is an aromatic compound containing a benzene and a carboxylic acid group forming 3-phenylprop-2-enoic acid. Pyramidatine is found in Aglaia elaeagnoidea, Aglaia forbesii , Aglaia foveolata, Aglaia gracilis, Aglaia perviridis, Aglaia silvestris and Haplophyllum latifolium. Pyramidatine was first documented in 2007 (PMID: 18698338). Based on a literature review a small amount of articles have been published on Pyramidatine (PMID: 17707871) (PMID: 28782465).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC20H22N2O2
Average Mass322.4080 Da
Monoisotopic Mass322.16813 Da
IUPAC Name(2E)-3-phenyl-N-[4-(phenylformamido)butyl]prop-2-enamide
Traditional Name(2E)-3-phenyl-N-[4-(phenylformamido)butyl]prop-2-enamide
CAS Registry NumberNot Available
SMILES
O=C(NCCCCNC(=O)C1=CC=CC=C1)\C=C\C1=CC=CC=C1
InChI Identifier
InChI=1S/C20H22N2O2/c23-19(14-13-17-9-3-1-4-10-17)21-15-7-8-16-22-20(24)18-11-5-2-6-12-18/h1-6,9-14H,7-8,15-16H2,(H,21,23)(H,22,24)/b14-13+
InChI KeyXYVZRTYPQHUZGY-BUHFOSPRSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Aglaia elaeagnoideaLOTUS Database
Aglaia forbesiiPlant
Aglaia foveolataLOTUS Database
Aglaia gracilisPlant
Aglaia perviridisLOTUS Database
Aglaia silvestrisLOTUS Database
Haplophyllum latifoliumLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as cinnamic acid amides. These are amides of cinnamic acids. Cinnamic acid is an aromatic compound containing a benzene and a carboxylic acid group forming 3-phenylprop-2-enoic acid.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassCinnamic acids and derivatives
Sub ClassCinnamic acid amides
Direct ParentCinnamic acid amides
Alternative Parents
Substituents
  • Cinnamic acid amide
  • Benzamide
  • Benzoic acid or derivatives
  • Benzoyl
  • Styrene
  • Monocyclic benzene moiety
  • Benzenoid
  • Secondary carboxylic acid amide
  • Carboxamide group
  • Carboxylic acid derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Organic oxide
  • Carbonyl group
  • Organopnictogen compound
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organic nitrogen compound
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP2.94ALOGPS
logP3.01ChemAxon
logS-5.4ALOGPS
pKa (Strongest Acidic)14.93ChemAxon
pKa (Strongest Basic)-0.18ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area58.2 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity97.35 m³·mol⁻¹ChemAxon
Polarizability37.22 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00034182
Chemspider ID1387420
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound1755965
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Joycharat N, Greger H, Hofer O, Saifah E: Flavaglines and triterpenoids from the leaves of Aglaia forbesii. Phytochemistry. 2008 Jan;69(1):206-11. doi: 10.1016/j.phytochem.2007.06.016. Epub 2007 Aug 20. [PubMed:17707871 ]
  2. Liu Z, Zhu H, Qu S, Tang L, Cao L, Yu W, Yang X, Jiang S, Zhu D, Tan C, Yu L: Pyramidatine (Z88) Sensitizes Vincristine-Resistant Human Oral Cancer (KB/VCR) Cells to Chemotherapeutic Agents by Inhibition of P-glycoprotein. Anticancer Agents Med Chem. 2018;18(2):286-294. doi: 10.2174/1871520617666170803155025. [PubMed:28782465 ]
  3. Salim AA, Chai HB, Rachman I, Riswan S, Kardono LB, Farnsworth NR, Carcache-Blanco EJ, Kinghorn AD: Constituents of the Leaves and Stem Bark of Aglaia foveolata. Tetrahedron. 2007 Aug 13;63(33):7926-7934. doi: 10.1016/j.tet.2007.05.074. [PubMed:18698338 ]