NP-MRD: Showing NP-Card for (+)-Avicequinone A (NP0072744)

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Record Information

Version

2.0

Created at

2022-04-28 18:02:34 UTC

Updated at

2022-04-28 18:02:34 UTC

NP-MRD ID

NP0072744

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(+)-Avicequinone A

Description

AVICEQUINONE A belongs to the class of organic compounds known as naphthofurans. Naphthofurans are compounds containing a furan ring fused to a naphthalene moiety. Furan is a 5 membered- ring aromatic ring with four carbon and one oxygen atoms. Naphthalene is a polycyclic aromatic hydrocarbon made up of two fused benzene rings. (+)-Avicequinone A is found in Avicennia alba and Avicennia marina . (+)-Avicequinone A was first documented in 2007 (PMID: 17500572). Based on a literature review very few articles have been published on AVICEQUINONE A.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 34 36  0  0  0  0  0  0  0  0999 V2000
   -2.3086   -0.4593   -1.7146 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0128   -0.2979   -0.4114 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.0423    0.7981   -0.5360 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7298   -1.4856   -0.1696 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0826   -0.0766    0.7510 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1652   -1.1390    0.9170 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1132   -0.7108    0.5021 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1065    0.5904    0.3302 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3297    1.2707   -0.1029 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2987    2.5148   -0.2604 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5257    0.4743   -0.3312 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6684    1.1664   -0.7434 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8108    0.4430   -0.9665 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8162   -0.9229   -0.7856 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7181   -1.6108   -0.3865 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5430   -0.8934   -0.1535 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3250   -1.5227    0.2714 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2863   -2.7689    0.4486 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2618    1.1596    0.6371 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1691    1.8497    1.8510 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4122    0.1699   -1.8374 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0898   -1.5436   -1.8973 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0268   -0.1504   -2.5289 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5230    1.0381    0.4431 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8746    0.3785   -1.1727 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6809    1.6850   -1.0682 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1069   -2.1260    0.2560 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6790   -0.0146    1.6847 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6150    2.2457   -0.8726 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7185    0.9686   -1.2907 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7326   -1.4659   -0.9695 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6562   -2.6692   -0.2278 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5185    1.8134   -0.2090 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5800    1.2912    2.4500 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  1  1
  2  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  8 19  1  0
 19 20  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
 11 16  2  0
 16 15  1  0
 15 14  2  0
 14 13  1  0
 13 12  2  0
 16 17  1  0
 17 18  2  0
 19  5  1  0
 12 11  1  0
 17  7  1  0
  1 21  1  0
  1 22  1  0
  1 23  1  0
  3 24  1  0
  3 25  1  0
  3 26  1  0
  4 27  1  0
  5 28  1  1
 19 33  1  6
 20 34  1  0
 15 32  1  0
 14 31  1  0
 13 30  1  0
 12 29  1  0
M  END


  Mrv1652304282220022D          

 20 22  0  0  1  0            999 V2000
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6425    1.0799    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.1274    0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.6425   -0.2549    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9524    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7774    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9524   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9524    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8974    1.8646    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  1  7  1  0  0  0  0
  7  8  2  0  0  0  0
  6  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
  5 12  1  0  0  0  0
  2 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
  1 15  1  0  0  0  0
 14 16  1  1  0  0  0
 16 17  1  0  0  0  0
 16 18  1  0  0  0  0
 16 19  1  0  0  0  0
 13 20  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0072744

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(C)(O)[C@H]1OC2=C([C@@H]1O)C(=O)C1=C(C=CC=C1)C2=O

> <INCHI_IDENTIFIER>
InChI=1S/C15H14O5/c1-15(2,19)14-12(18)9-10(16)7-5-3-4-6-8(7)11(17)13(9)20-14/h3-6,12,14,18-19H,1-2H3/t12-,14-/m0/s1

> <INCHI_KEY>
AAULQOBOWPLXLU-JSGCOSHPSA-N

> <FORMULA>
C15H14O5

> <MOLECULAR_WEIGHT>
274.272

> <EXACT_MASS>
274.084123551

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
34

> <JCHEM_AVERAGE_POLARIZABILITY>
27.659462781890955

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2S,3S)-3-hydroxy-2-(2-hydroxypropan-2-yl)-2H,3H,4H,9H-naphtho[2,3-b]furan-4,9-dione

> <ALOGPS_LOGP>
1.21

> <JCHEM_LOGP>
0.15832586899999973

> <ALOGPS_LOGS>
-1.64

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.349508365815016

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.12102080837738

> <JCHEM_PKA_STRONGEST_BASIC>
-3.143234542461678

> <JCHEM_POLAR_SURFACE_AREA>
83.83000000000001

> <JCHEM_REFRACTIVITY>
71.7543

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
6.29e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2S,3S)-3-hydroxy-2-(2-hydroxypropan-2-yl)-2H,3H-naphtho[2,3-b]furan-4,9-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 28-APR-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   28-APR-22         0                                  
HETATM    1  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       5.335   1.540   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       4.001   2.310   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       4.001   3.850   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       4.001  -2.310   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.000  -0.000   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.799   2.016   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       7.705   0.770   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       6.799  -0.476   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       9.245   0.770   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      10.785   0.770   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0       9.245  -0.770   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       9.245   2.310   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       7.275   3.481   0.000  0.00  0.00           O+0
CONECT    1    2    7   15                                                  
CONECT    2    1    3   13                                                  
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6   12                                                  
CONECT    6    5    7    9                                                  
CONECT    7    6    1    8                                                  
CONECT    8    7                                                            
CONECT    9    6   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11    5                                                       
CONECT   13    2   14   20                                                  
CONECT   14   13   15   16                                                  
CONECT   15   14    1                                                       
CONECT   16   14   17   18   19                                             
CONECT   17   16                                                            
CONECT   18   16                                                            
CONECT   19   16                                                            
CONECT   20   13                                                            
MASTER        0    0    0    0    0    0    0    0   20    0   44    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₅H₁₄O₅

Average Mass

274.2720 Da

Monoisotopic Mass

274.08412 Da

IUPAC Name

(2S,3S)-3-hydroxy-2-(2-hydroxypropan-2-yl)-2H,3H,4H,9H-naphtho[2,3-b]furan-4,9-dione

Traditional Name

(2S,3S)-3-hydroxy-2-(2-hydroxypropan-2-yl)-2H,3H-naphtho[2,3-b]furan-4,9-dione

CAS Registry Number

Not Available

SMILES

CC(C)(O)[C@H]1OC2=C([C@@H]1O)C(=O)C1=C(C=CC=C1)C2=O

InChI Identifier

InChI=1S/C15H14O5/c1-15(2,19)14-12(18)9-10(16)7-5-3-4-6-8(7)11(17)13(9)20-14/h3-6,12,14,18-19H,1-2H3/t12-,14-/m0/s1

InChI Key

AAULQOBOWPLXLU-JSGCOSHPSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Avicennia alba	Plant	KNApSAcK
Avicennia marina	Plant	KNApSAcK

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as naphthofurans. Naphthofurans are compounds containing a furan ring fused to a naphthalene moiety. Furan is a 5 membered- ring aromatic ring with four carbon and one oxygen atoms. Naphthalene is a polycyclic aromatic hydrocarbon made up of two fused benzene rings.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Naphthofurans

Sub Class

Not Available

Direct Parent

Naphthofurans

Alternative Parents

Substituents

Naphthofuran
Naphthoquinone
Naphthalene
Quinone
Aryl ketone
Benzenoid
Dihydrofuran
Tertiary alcohol
Vinylogous ester
Ketone
Secondary alcohol
Oxacycle
Organooxygen compound
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.21	ALOGPS
logP	0.16	ChemAxon
logS	-1.6	ALOGPS
pKa (Strongest Acidic)	13.12	ChemAxon
pKa (Strongest Basic)	-3.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	83.83 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	71.75 m³·mol⁻¹	ChemAxon
Polarizability	27.66 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00032748

Chemspider ID

23283426

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

16757531

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Han L, Huang X, Dahse HM, Moellmann U, Fu H, Grabley S, Sattler I, Lin W: Unusual naphthoquinone derivatives from the twigs of Avicennia marina. J Nat Prod. 2007 Jun;70(6):923-7. doi: 10.1021/np060587g. Epub 2007 May 15. [PubMed:17500572 ]

Showing NP-Card for (+)-Avicequinone A (NP0072744)

MOL for NP0072744 ((+)-Avicequinone A)

3D MOL for NP0072744 ((+)-Avicequinone A)

3D SDF for NP0072744 ((+)-Avicequinone A)

3D-SDF for NP0072744 ((+)-Avicequinone A)

PDB for NP0072744 ((+)-Avicequinone A)

3D PDB for NP0072744 ((+)-Avicequinone A)

SMILES for NP0072744 ((+)-Avicequinone A)

INCHI for NP0072744 ((+)-Avicequinone A)

Structure for NP0072744 ((+)-Avicequinone A)

3D Structure for NP0072744 ((+)-Avicequinone A)