Np mrd loader

Record Information
Version2.0
Created at2022-04-28 16:06:20 UTC
Updated at2022-04-28 16:06:20 UTC
NP-MRD IDNP0070656
Secondary Accession NumbersNone
Natural Product Identification
Common Name(+)-4-Hydroxypanduratin A
Description4-Hydroxypanduratin A belongs to the class of organic compounds known as linear diarylheptanoids. These are diarylheptanoids with an open heptane chain. The two aromatic rings are linked only by the heptane chain. (+)-4-Hydroxypanduratin A is found in Boesenbergia rotunda and Boesenbergia rotunda (LINN.) MANSF. . (+)-4-Hydroxypanduratin A was first documented in 2006 (PMID: 16960369). Based on a literature review a significant number of articles have been published on 4-hydroxypanduratin A (PMID: 30606988) (PMID: 18591809) (PMID: 17978489) (PMID: 33271853) (PMID: 25883671) (PMID: 23390345).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC25H28O4
Average Mass392.4950 Da
Monoisotopic Mass392.19876 Da
IUPAC Name2-[(1R,2S,6R)-3-methyl-2-(3-methylbut-2-en-1-yl)-6-phenylcyclohex-3-ene-1-carbonyl]benzene-1,3,5-triol
Traditional Name2-[(1R,2S,6R)-3-methyl-2-(3-methylbut-2-en-1-yl)-6-phenylcyclohex-3-ene-1-carbonyl]benzene-1,3,5-triol
CAS Registry NumberNot Available
SMILES
CC(C)=CC[C@H]1[C@H]([C@@H](CC=C1C)C1=CC=CC=C1)C(=O)C1=C(O)C=C(O)C=C1O
InChI Identifier
InChI=1S/C25H28O4/c1-15(2)9-11-19-16(3)10-12-20(17-7-5-4-6-8-17)23(19)25(29)24-21(27)13-18(26)14-22(24)28/h4-10,13-14,19-20,23,26-28H,11-12H2,1-3H3/t19-,20+,23-/m1/s1
InChI KeyAYPOOQWQTQIRFW-ZRCGQRJVSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Boesenbergia rotundaLOTUS Database
Boesenbergia rotunda (LINN.) MANSF.Plant
Chemical Taxonomy
Description Belongs to the class of organic compounds known as linear diarylheptanoids. These are diarylheptanoids with an open heptane chain. The two aromatic rings are linked only by the heptane chain.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassDiarylheptanoids
Sub ClassLinear diarylheptanoids
Direct ParentLinear diarylheptanoids
Alternative Parents
Substituents
  • Linear 1,7-diphenylheptane skeleton
  • Alkyl-phenylketone
  • Acylphloroglucinol derivative
  • Monocyclic monoterpenoid
  • Aromatic monoterpenoid
  • Monoterpenoid
  • Phenylketone
  • Phloroglucinol derivative
  • Benzenetriol
  • Benzoyl
  • Aryl alkyl ketone
  • Aryl ketone
  • Phenol
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Benzenoid
  • Monocyclic benzene moiety
  • Vinylogous acid
  • Ketone
  • Polyol
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organic oxygen compound
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP5.06ALOGPS
logP6.84ChemAxon
logS-4.6ALOGPS
pKa (Strongest Acidic)7.96ChemAxon
pKa (Strongest Basic)-4.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area77.76 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity117.4 m³·mol⁻¹ChemAxon
Polarizability43.56 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00029276
Chemspider ID552296
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound636530
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Tanigaki R, Takahashi R, Nguyen MTT, Nguyen NT, Do TVN, Nguyen HX, Kataoka T: 4-Hydroxypanduratin A and Isopanduratin A Inhibit Tumor Necrosis Factor alpha-Stimulated Gene Expression and the Nuclear Factor kappaB-Dependent Signaling Pathway in Human Lung Adenocarcinoma A549 Cells. Biol Pharm Bull. 2019;42(1):26-33. doi: 10.1248/bpb.b18-00457. [PubMed:30606988 ]
  2. Morikawa T, Funakoshi K, Ninomiya K, Yasuda D, Miyagawa K, Matsuda H, Yoshikawa M: Medicinal foodstuffs. XXXIV. Structures of new prenylchalcones and prenylflavanones with TNF-alpha and aminopeptidase N inhibitory activities from Boesenbergia rotunda. Chem Pharm Bull (Tokyo). 2008 Jul;56(7):956-62. doi: 10.1248/cpb.56.956. [PubMed:18591809 ]
  3. Yoon JH, Shim JS, Cho Y, Baek NI, Lee CW, Kim HS, Hwang JK: Depigmentation of melanocytes by isopanduratin A and 4-hydroxypanduratin A isolated from Kaempferia pandurata ROXB. Biol Pharm Bull. 2007 Nov;30(11):2141-5. doi: 10.1248/bpb.30.2141. [PubMed:17978489 ]
  4. Adhikari D, Gong DS, Oh SH, Sung EH, Lee SO, Kim DW, Oak MH, Kim HJ: Vasorelaxant Effect of Boesenbergia rotunda and Its Active Ingredients on an Isolated Coronary Artery. Plants (Basel). 2020 Dec 1;9(12). pii: plants9121688. doi: 10.3390/plants9121688. [PubMed:33271853 ]
  5. Tan BC, Tan SK, Wong SM, Ata N, Rahman NA, Khalid N: Distribution of Flavonoids and Cyclohexenyl Chalcone Derivatives in Conventional Propagated and In Vitro-Derived Field-Grown Boesenbergia rotunda (L.) Mansf. Evid Based Complement Alternat Med. 2015;2015:451870. doi: 10.1155/2015/451870. Epub 2015 Apr 7. [PubMed:25883671 ]
  6. Seniya C, Mishra H, Yadav A, Sagar N, Chaturvedi B, Uchadia K, Wadhwa G: Antiviral potential of 4-hydroxypanduratin A, secondary metabolite of Fingerroot, Boesenbergia pandurata (Schult.), towards Japanese Encephalitis virus NS2B/NS3 protease. Bioinformation. 2013;9(1):54-60. doi: 10.6026/97320630009054. Epub 2013 Jan 9. [PubMed:23390345 ]
  7. Kannappan P, Narayanan S: Mutation and docking studies on NS2b-NS3 complex from yellow fever virus towards drug discovery. Bioinformation. 2011;6(8):303-6. doi: 10.6026/97320630006303. Epub 2011 Jul 6. [PubMed:21769191 ]
  8. Frimayanti N, Chee CF, Zain SM, Rahman NA: Design of new competitive dengue NS2B/NS3 protease inhibitors-a computational approach. Int J Mol Sci. 2011 Feb 9;12(2):1089-100. doi: 10.3390/ijms12021089. [PubMed:21541045 ]
  9. Shim JS, Han YS, Hwang JK: The effect of 4-hydroxypanduratin A on the mitogen-activated protein kinase-dependent activation of matrix metalloproteinase-1 expression in human skin fibroblasts. J Dermatol Sci. 2009 Feb;53(2):129-34. doi: 10.1016/j.jdermsci.2008.09.002. Epub 2008 Dec 2. [PubMed:19054653 ]
  10. Shindo K, Kato M, Kinoshita A, Kobayashi A, Koike Y: Analysis of antioxidant activities contained in the Boesenbergia pandurata Schult. Rhizome. Biosci Biotechnol Biochem. 2006 Sep;70(9):2281-4. doi: 10.1271/bbb.60086. Epub 2006 Sep 7. [PubMed:16960369 ]