Np mrd loader

Record Information
Version2.0
Created at2021-06-20 22:45:07 UTC
Updated at2021-06-30 00:14:40 UTC
NP-MRD IDNP0040644
Secondary Accession NumbersNone
Natural Product Identification
Common Nameisopimaric acid
Provided ByJEOL DatabaseJEOL Logo
DescriptionZINC13831584 belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. isopimaric acid is found in Abies sibirica, Abies spectabilis, Biota orientalis, Boesenbergia rotunda, Boesenbergia rotunda (L.) Mansf.Kulturpfl. , Calamus draco, Cephalotaxus wilsoniana, Chamaecyparis formosensis, Chrozophora oblongifolia, Cryptomeria japonica, Dracaena cochinchinensis, Halocarpus bidwillii, Homo sapiens, Isodon interruptus, Juniperus communis, Juniperus conferta, Juniperus excelsa , Juniperus phoenicea , Juniperus rigida, Juniperus thurifera, Juniperus thurifera var.africana, Larix decidua, Larix gmelinii, Larix gmelinii, Larix kaempferi, Mitrephora celebica, Nepeta tuberosa, Picea glehnii L., Picea jezoensis, Picea ajanensis, Picea koraiensis, Picea obovata, Sitka spruce, Pinus brutia, Pinus merkusii, Pinus nigra, Pinus palustris , Pinus pinaster, Pinus ponderosa, Pinus pumila, Pinus resinosa, Pinus roxburghii , Pinus sibirica, Pinus strobus, Pinus sylvestris L. , Pinus taeda, Thuja orientalis , Rhizoclonium hieroglyphicum, Salvia caespitosa, Salvia caespitosa Montbret and Aucher ex.Bentham, Salvia greggii, Salvia wiedemannii, Tetraclinis articulata, Thuja occidentalis, Tillandsia brachycaulos and Torreya nucifera. isopimaric acid was first documented in 2011 (Zaugg, J., et al.). Based on a literature review very few articles have been published on ZINC13831584.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC20H30O2
Average Mass302.4580 Da
Monoisotopic Mass302.22458 Da
IUPAC Name(1R,4aR,4bS,7S,10aS)-7-ethenyl-1,4a,7-trimethyl-1,2,3,4,4a,4b,5,6,7,8,10,10a-dodecahydrophenanthrene-1-carboxylic acid
Traditional Name(1R,4aR,4bS,7S,10aS)-7-ethenyl-1,4a,7-trimethyl-3,4,4b,5,6,8,10,10a-octahydro-2H-phenanthrene-1-carboxylic acid
CAS Registry NumberNot Available
SMILES
[H]OC(=O)[C@]1(C([H])([H])[H])C([H])([H])C([H])([H])C([H])([H])[C@]2(C([H])([H])[H])[C@]3([H])C(=C([H])C([H])([H])[C@]12[H])C([H])([H])[C@](C([H])=C([H])[H])(C([H])([H])[H])C([H])([H])C3([H])[H]
InChI Identifier
InChI=1S/C20H30O2/c1-5-18(2)12-9-15-14(13-18)7-8-16-19(15,3)10-6-11-20(16,4)17(21)22/h5,7,15-16H,1,6,8-13H2,2-4H3,(H,21,22)/t15-,16-,18-,19+,20+/m0/s1
InChI KeyMXYATHGRPJZBNA-FLFBIERCSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 500 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Abies sibiricaLOTUS Database
Abies spectabilisLOTUS Database
Biota orientalisJEOL database
    • Zaugg, J., et al, J. Nat. Prod. 74, 1764 (2011)
Boesenbergia rotundaLOTUS Database
Boesenbergia rotunda (L.) Mansf.Kulturpfl.Plant
Calamus dracoLOTUS Database
Cephalotaxus wilsonianaPlant
Chamaecyparis formosensisPlant
Chrozophora oblongifoliaLOTUS Database
Cryptomeria japonicaLOTUS Database
Dracaena cochinchinensisPlant
Halocarpus bidwilliiLOTUS Database
Homo sapiensLOTUS Database
Isodon interruptusLOTUS Database
Juniperus communisLOTUS Database
Juniperus confertaPlant
Juniperus excelsaPlant
Juniperus phoeniceaPlant
Juniperus rigidaPlant
Juniperus thuriferaLOTUS Database
Juniperus thurifera var.africanaPlant
Larix deciduaLOTUS Database
Larix gmeliniLOTUS Database
Larix gmelinii var. olgensisLOTUS Database
Larix kaempferiLOTUS Database
Mitrephora celebicaLOTUS Database
Nepeta tuberosaLOTUS Database
Picea glehnii L.Plant
Picea jezoensisLOTUS Database
Picea jezoensis var. jezoensisPlant
Picea koraiensisPlant
Picea obovataLOTUS Database
Picea sitchensis-
Pinus brutiaLOTUS Database
Pinus merkusiiLOTUS Database
Pinus nigraLOTUS Database
Pinus palustrisPlant
Pinus pinasterLOTUS Database
Pinus ponderosaLOTUS Database
Pinus pumilaLOTUS Database
Pinus resinosaLOTUS Database
Pinus roxburghiiPlant
Pinus sibiricaPlant
Pinus strobusLOTUS Database
Pinus sylvestrisPlant
Pinus taedaPlant
Platycladus orientalisPlant
Rhizoclonium hieroglyphicumLOTUS Database
Salvia caespitosaLOTUS Database
Salvia caespitosa Montbret and Aucher ex.BenthamPlant
Salvia greggiiLOTUS Database
Salvia wiedemanniiLOTUS Database
Tetraclinis articulataPlant
Thuja occidentalisLOTUS Database
Tillandsia brachycaulosLOTUS Database
Torreya nuciferaLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassDiterpenoids
Direct ParentDiterpenoids
Alternative Parents
Substituents
  • Pimarane diterpenoid
  • Diterpenoid
  • Phenanthrene
  • Hydrophenanthrene
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP5.28ALOGPS
logP5.07ChemAxon
logS-5.7ALOGPS
pKa (Strongest Acidic)4.8ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area37.3 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity90.33 m³·mol⁻¹ChemAxon
Polarizability35.36 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound25886829
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Zaugg, J., et al. (2011). Zaugg, J., et al, J. Nat. Prod. 74, 1764 (2011). J. Nat. Prod..