NP-MRD: Showing NP-Card for (+)-6,11-epoxy-isodaucane (NP0030879)

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Record Information

Version

2.0

Created at

2021-06-19 22:07:07 UTC

Updated at

2021-06-29 23:59:08 UTC

NP-MRD ID

NP0030879

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(+)-6,11-epoxy-isodaucane

Provided By

JEOL Database JEOL Logo

Description

(1R,4S,7R,11R,12S)-3,3,7,11-tetramethyl-2-oxatricyclo[5.4.1.0⁴,¹²]Dodecane belongs to the class of organic compounds known as germacrane sesquiterpenoids. These are sesquiterpenoids having the germacrane skeleton, with a structure characterized by a cyclodecane ring substituted with an isopropyl and two methyl groups. (+)-6,11-epoxy-isodaucane is found in Tritomaria polita. (+)-6,11-epoxy-isodaucane was first documented in 2003 (Adio, A. M., et al.). Based on a literature review very few articles have been published on (1R,4S,7R,11R,12S)-3,3,7,11-tetramethyl-2-oxatricyclo[5.4.1.0⁴,¹²]Dodecane.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306202100073D          

 42 44  0  0  0  0            999 V2000
   -5.2328    0.6774    1.2300 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4528   -0.6376    1.0449 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0588   -1.1474    2.4372 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.5785   -2.5893    2.4824 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.3055   -2.8639    1.6902 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.4404   -2.9306    0.1495 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5610   -3.8985   -0.2677 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1067   -3.4360   -0.4521 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.2098   -2.2087   -0.4365 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1452   -1.0582   -0.8183 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.5812   -1.5651   -0.5612 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.2670   -0.3823    0.1042 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.2263    0.3600    0.7564 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0345    0.2741   -0.0508 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1642    0.4282    0.8830 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0446    1.4606   -1.0303 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6154    1.4464    1.7067 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5771    1.0667    0.2658 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1199    0.5202    1.8532 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1405   -1.3486    0.5724 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3003   -0.4942    2.8864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9325   -1.0832    3.0997 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3716   -2.8293    3.5341 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3867   -3.2658    2.1864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5449   -2.1333    1.9872 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9271   -3.8360    2.0365 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5538   -4.0763   -1.3494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4417   -4.8710    0.2228 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5530   -3.5108   -0.0208 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6689   -4.2685    0.1085 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2426   -3.7724   -1.4883 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6166   -2.3068   -1.1483 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2352   -2.0991    0.5547 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0193   -0.8815   -1.8954 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0702   -1.7382   -1.5309 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6341    0.2595   -0.7094 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1753    1.4264    1.3372 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1115    0.2852    0.3537 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1106   -0.2704    1.7245 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9049    1.4205   -1.7072 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1340    1.4808   -1.6384 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1250    2.4110   -0.4902 H   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  1  0  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
  3  2  1  0  0  0  0
 12 13  1  0  0  0  0
 12  2  1  0  0  0  0
 10 14  1  0  0  0  0
 11  6  1  0  0  0  0
  2  1  1  0  0  0  0
  6  5  1  0  0  0  0
  6  7  1  1  0  0  0
 14 13  1  0  0  0  0
  4  3  1  0  0  0  0
 14 15  1  1  0  0  0
 14 16  1  0  0  0  0
 11 12  1  0  0  0  0
 11 35  1  6  0  0  0
  5 25  1  0  0  0  0
  5 26  1  0  0  0  0
  4 23  1  0  0  0  0
  4 24  1  0  0  0  0
  3 21  1  0  0  0  0
  3 22  1  0  0  0  0
 12 36  1  6  0  0  0
  2 20  1  6  0  0  0
  8 30  1  0  0  0  0
  8 31  1  0  0  0  0
  9 32  1  0  0  0  0
  9 33  1  0  0  0  0
 10 34  1  6  0  0  0
  1 17  1  0  0  0  0
  1 18  1  0  0  0  0
  1 19  1  0  0  0  0
  7 27  1  0  0  0  0
  7 28  1  0  0  0  0
  7 29  1  0  0  0  0
 15 37  1  0  0  0  0
 15 38  1  0  0  0  0
 15 39  1  0  0  0  0
 16 40  1  0  0  0  0
 16 41  1  0  0  0  0
 16 42  1  0  0  0  0
M  END

     RDKit          3D

 42 44  0  0  0  0  0  0  0  0999 V2000
   -5.2328    0.6774    1.2300 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4528   -0.6376    1.0449 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0588   -1.1474    2.4372 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5785   -2.5893    2.4824 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3055   -2.8639    1.6902 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4404   -2.9306    0.1495 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5610   -3.8985   -0.2677 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1067   -3.4360   -0.4521 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2098   -2.2087   -0.4365 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1452   -1.0582   -0.8183 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.5812   -1.5651   -0.5612 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.2670   -0.3823    0.1042 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.2263    0.3600    0.7564 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0345    0.2741   -0.0508 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1642    0.4282    0.8830 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0446    1.4606   -1.0303 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6154    1.4464    1.7067 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5771    1.0667    0.2658 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1199    0.5202    1.8532 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1405   -1.3486    0.5724 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3003   -0.4942    2.8864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9325   -1.0832    3.0997 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3716   -2.8293    3.5341 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3867   -3.2658    2.1864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5449   -2.1333    1.9872 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9271   -3.8360    2.0365 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5538   -4.0763   -1.3494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4417   -4.8710    0.2228 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5530   -3.5108   -0.0208 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6689   -4.2685    0.1085 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2426   -3.7724   -1.4883 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6166   -2.3068   -1.1483 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2352   -2.0991    0.5547 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0193   -0.8815   -1.8954 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0702   -1.7382   -1.5309 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6341    0.2595   -0.7094 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1753    1.4264    1.3372 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1115    0.2852    0.3537 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1106   -0.2704    1.7245 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9049    1.4205   -1.7072 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1340    1.4808   -1.6384 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1250    2.4110   -0.4902 H   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  1  0
  6  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
  3  2  1  0
 12 13  1  0
 12  2  1  0
 10 14  1  0
 11  6  1  0
  2  1  1  0
  6  5  1  0
  6  7  1  1
 14 13  1  0
  4  3  1  0
 14 15  1  1
 14 16  1  0
 11 12  1  0
 11 35  1  6
  5 25  1  0
  5 26  1  0
  4 23  1  0
  4 24  1  0
  3 21  1  0
  3 22  1  0
 12 36  1  6
  2 20  1  6
  8 30  1  0
  8 31  1  0
  9 32  1  0
  9 33  1  0
 10 34  1  6
  1 17  1  0
  1 18  1  0
  1 19  1  0
  7 27  1  0
  7 28  1  0
  7 29  1  0
 15 37  1  0
 15 38  1  0
 15 39  1  0
 16 40  1  0
 16 41  1  0
 16 42  1  0
M  END


  Mrv1652306202100073D          

 42 44  0  0  0  0            999 V2000
   -5.2328    0.6774    1.2300 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4528   -0.6376    1.0449 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0588   -1.1474    2.4372 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.5785   -2.5893    2.4824 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.3055   -2.8639    1.6902 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.4404   -2.9306    0.1495 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5610   -3.8985   -0.2677 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1067   -3.4360   -0.4521 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.2098   -2.2087   -0.4365 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1452   -1.0582   -0.8183 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.5812   -1.5651   -0.5612 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.2670   -0.3823    0.1042 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.2263    0.3600    0.7564 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0345    0.2741   -0.0508 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1642    0.4282    0.8830 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0446    1.4606   -1.0303 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6154    1.4464    1.7067 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5771    1.0667    0.2658 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1199    0.5202    1.8532 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1405   -1.3486    0.5724 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3003   -0.4942    2.8864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9325   -1.0832    3.0997 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3716   -2.8293    3.5341 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3867   -3.2658    2.1864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5449   -2.1333    1.9872 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9271   -3.8360    2.0365 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5538   -4.0763   -1.3494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4417   -4.8710    0.2228 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5530   -3.5108   -0.0208 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6689   -4.2685    0.1085 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2426   -3.7724   -1.4883 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6166   -2.3068   -1.1483 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2352   -2.0991    0.5547 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0193   -0.8815   -1.8954 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0702   -1.7382   -1.5309 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6341    0.2595   -0.7094 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1753    1.4264    1.3372 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1115    0.2852    0.3537 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1106   -0.2704    1.7245 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9049    1.4205   -1.7072 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1340    1.4808   -1.6384 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1250    2.4110   -0.4902 H   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  1  0  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
  3  2  1  0  0  0  0
 12 13  1  0  0  0  0
 12  2  1  0  0  0  0
 10 14  1  0  0  0  0
 11  6  1  0  0  0  0
  2  1  1  0  0  0  0
  6  5  1  0  0  0  0
  6  7  1  1  0  0  0
 14 13  1  0  0  0  0
  4  3  1  0  0  0  0
 14 15  1  1  0  0  0
 14 16  1  0  0  0  0
 11 12  1  0  0  0  0
 11 35  1  6  0  0  0
  5 25  1  0  0  0  0
  5 26  1  0  0  0  0
  4 23  1  0  0  0  0
  4 24  1  0  0  0  0
  3 21  1  0  0  0  0
  3 22  1  0  0  0  0
 12 36  1  6  0  0  0
  2 20  1  6  0  0  0
  8 30  1  0  0  0  0
  8 31  1  0  0  0  0
  9 32  1  0  0  0  0
  9 33  1  0  0  0  0
 10 34  1  6  0  0  0
  1 17  1  0  0  0  0
  1 18  1  0  0  0  0
  1 19  1  0  0  0  0
  7 27  1  0  0  0  0
  7 28  1  0  0  0  0
  7 29  1  0  0  0  0
 15 37  1  0  0  0  0
 15 38  1  0  0  0  0
 15 39  1  0  0  0  0
 16 40  1  0  0  0  0
 16 41  1  0  0  0  0
 16 42  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0030879

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]C([H])([H])[C@]1([H])C([H])([H])C([H])([H])C([H])([H])[C@]2(C([H])([H])[H])C([H])([H])C([H])([H])[C@@]3([H])[C@]2([H])[C@]1([H])OC3(C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C15H26O/c1-10-6-5-8-15(4)9-7-11-12(15)13(10)16-14(11,2)3/h10-13H,5-9H2,1-4H3/t10-,11+,12-,13-,15-/m1/s1

> <INCHI_KEY>
GAZOZLXFXCZLCJ-WPLOAARJSA-N

> <FORMULA>
C15H26O

> <MOLECULAR_WEIGHT>
222.372

> <EXACT_MASS>
222.198365457

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_ATOM_COUNT>
42

> <JCHEM_AVERAGE_POLARIZABILITY>
27.086287600761047

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,4S,7R,11R,12S)-3,3,7,11-tetramethyl-2-oxatricyclo[5.4.1.0^{4,12}]dodecane

> <ALOGPS_LOGP>
3.95

> <JCHEM_LOGP>
3.8102662343333327

> <ALOGPS_LOGS>
-5.66

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-4.190213635113866

> <JCHEM_POLAR_SURFACE_AREA>
9.23

> <JCHEM_REFRACTIVITY>
66.5894

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.84e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,4S,7R,11R,12S)-3,3,7,11-tetramethyl-2-oxatricyclo[5.4.1.0^{4,12}]dodecane

> <JCHEM_VEBER_RULE>
1

$$$$

     RDKit          3D

 42 44  0  0  0  0  0  0  0  0999 V2000
   -5.2328    0.6774    1.2300 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4528   -0.6376    1.0449 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0588   -1.1474    2.4372 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5785   -2.5893    2.4824 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3055   -2.8639    1.6902 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4404   -2.9306    0.1495 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5610   -3.8985   -0.2677 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1067   -3.4360   -0.4521 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2098   -2.2087   -0.4365 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1452   -1.0582   -0.8183 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.5812   -1.5651   -0.5612 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.2670   -0.3823    0.1042 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.2263    0.3600    0.7564 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0345    0.2741   -0.0508 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1642    0.4282    0.8830 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0446    1.4606   -1.0303 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6154    1.4464    1.7067 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5771    1.0667    0.2658 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1199    0.5202    1.8532 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1405   -1.3486    0.5724 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3003   -0.4942    2.8864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9325   -1.0832    3.0997 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3716   -2.8293    3.5341 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3867   -3.2658    2.1864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5449   -2.1333    1.9872 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9271   -3.8360    2.0365 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5538   -4.0763   -1.3494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4417   -4.8710    0.2228 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5530   -3.5108   -0.0208 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6689   -4.2685    0.1085 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2426   -3.7724   -1.4883 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6166   -2.3068   -1.1483 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2352   -2.0991    0.5547 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0193   -0.8815   -1.8954 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0702   -1.7382   -1.5309 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6341    0.2595   -0.7094 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1753    1.4264    1.3372 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1115    0.2852    0.3537 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1106   -0.2704    1.7245 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9049    1.4205   -1.7072 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1340    1.4808   -1.6384 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1250    2.4110   -0.4902 H   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  1  0
  6  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
  3  2  1  0
 12 13  1  0
 12  2  1  0
 10 14  1  0
 11  6  1  0
  2  1  1  0
  6  5  1  0
  6  7  1  1
 14 13  1  0
  4  3  1  0
 14 15  1  1
 14 16  1  0
 11 12  1  0
 11 35  1  6
  5 25  1  0
  5 26  1  0
  4 23  1  0
  4 24  1  0
  3 21  1  0
  3 22  1  0
 12 36  1  6
  2 20  1  6
  8 30  1  0
  8 31  1  0
  9 32  1  0
  9 33  1  0
 10 34  1  6
  1 17  1  0
  1 18  1  0
  1 19  1  0
  7 27  1  0
  7 28  1  0
  7 29  1  0
 15 37  1  0
 15 38  1  0
 15 39  1  0
 16 40  1  0
 16 41  1  0
 16 42  1  0
M  END

HEADER    PROTEIN                                 20-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   20-JUN-21         0                                  
HETATM    1  C   UNK     0      -5.233   0.677   1.230  0.00  0.00           C+0
HETATM    2  C   UNK     0      -4.453  -0.638   1.045  0.00  0.00           C+0
HETATM    3  C   UNK     0      -4.059  -1.147   2.437  0.00  0.00           C+0
HETATM    4  C   UNK     0      -3.579  -2.589   2.482  0.00  0.00           C+0
HETATM    5  C   UNK     0      -2.305  -2.864   1.690  0.00  0.00           C+0
HETATM    6  C   UNK     0      -2.440  -2.931   0.150  0.00  0.00           C+0
HETATM    7  C   UNK     0      -3.561  -3.898  -0.268  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.107  -3.436  -0.452  0.00  0.00           C+0
HETATM    9  C   UNK     0      -0.210  -2.209  -0.437  0.00  0.00           C+0
HETATM   10  C   UNK     0      -1.145  -1.058  -0.818  0.00  0.00           C+0
HETATM   11  C   UNK     0      -2.581  -1.565  -0.561  0.00  0.00           C+0
HETATM   12  C   UNK     0      -3.267  -0.382   0.104  0.00  0.00           C+0
HETATM   13  O   UNK     0      -2.226   0.360   0.756  0.00  0.00           O+0
HETATM   14  C   UNK     0      -1.034   0.274  -0.051  0.00  0.00           C+0
HETATM   15  C   UNK     0       0.164   0.428   0.883  0.00  0.00           C+0
HETATM   16  C   UNK     0      -1.045   1.461  -1.030  0.00  0.00           C+0
HETATM   17  H   UNK     0      -4.615   1.446   1.707  0.00  0.00           H+0
HETATM   18  H   UNK     0      -5.577   1.067   0.266  0.00  0.00           H+0
HETATM   19  H   UNK     0      -6.120   0.520   1.853  0.00  0.00           H+0
HETATM   20  H   UNK     0      -5.141  -1.349   0.572  0.00  0.00           H+0
HETATM   21  H   UNK     0      -3.300  -0.494   2.886  0.00  0.00           H+0
HETATM   22  H   UNK     0      -4.933  -1.083   3.100  0.00  0.00           H+0
HETATM   23  H   UNK     0      -3.372  -2.829   3.534  0.00  0.00           H+0
HETATM   24  H   UNK     0      -4.387  -3.266   2.186  0.00  0.00           H+0
HETATM   25  H   UNK     0      -1.545  -2.133   1.987  0.00  0.00           H+0
HETATM   26  H   UNK     0      -1.927  -3.836   2.037  0.00  0.00           H+0
HETATM   27  H   UNK     0      -3.554  -4.076  -1.349  0.00  0.00           H+0
HETATM   28  H   UNK     0      -3.442  -4.871   0.223  0.00  0.00           H+0
HETATM   29  H   UNK     0      -4.553  -3.511  -0.021  0.00  0.00           H+0
HETATM   30  H   UNK     0      -0.669  -4.269   0.109  0.00  0.00           H+0
HETATM   31  H   UNK     0      -1.243  -3.772  -1.488  0.00  0.00           H+0
HETATM   32  H   UNK     0       0.617  -2.307  -1.148  0.00  0.00           H+0
HETATM   33  H   UNK     0       0.235  -2.099   0.555  0.00  0.00           H+0
HETATM   34  H   UNK     0      -1.019  -0.882  -1.895  0.00  0.00           H+0
HETATM   35  H   UNK     0      -3.070  -1.738  -1.531  0.00  0.00           H+0
HETATM   36  H   UNK     0      -3.634   0.260  -0.709  0.00  0.00           H+0
HETATM   37  H   UNK     0       0.175   1.426   1.337  0.00  0.00           H+0
HETATM   38  H   UNK     0       1.111   0.285   0.354  0.00  0.00           H+0
HETATM   39  H   UNK     0       0.111  -0.270   1.724  0.00  0.00           H+0
HETATM   40  H   UNK     0      -1.905   1.421  -1.707  0.00  0.00           H+0
HETATM   41  H   UNK     0      -0.134   1.481  -1.638  0.00  0.00           H+0
HETATM   42  H   UNK     0      -1.125   2.411  -0.490  0.00  0.00           H+0
CONECT    1    2   17   18   19                                             
CONECT    2    3   12    1   20                                             
CONECT    3    2    4   21   22                                             
CONECT    4    5    3   23   24                                             
CONECT    5    4    6   25   26                                             
CONECT    6    8   11    5    7                                             
CONECT    7    6   27   28   29                                             
CONECT    8    6    9   30   31                                             
CONECT    9    8   10   32   33                                             
CONECT   10    9   11   14   34                                             
CONECT   11   10    6   12   35                                             
CONECT   12   13    2   11   36                                             
CONECT   13   12   14                                                       
CONECT   14   10   13   15   16                                             
CONECT   15   14   37   38   39                                             
CONECT   16   14   40   41   42                                             
CONECT   17    1                                                            
CONECT   18    1                                                            
CONECT   19    1                                                            
CONECT   20    2                                                            
CONECT   21    3                                                            
CONECT   22    3                                                            
CONECT   23    4                                                            
CONECT   24    4                                                            
CONECT   25    5                                                            
CONECT   26    5                                                            
CONECT   27    7                                                            
CONECT   28    7                                                            
CONECT   29    7                                                            
CONECT   30    8                                                            
CONECT   31    8                                                            
CONECT   32    9                                                            
CONECT   33    9                                                            
CONECT   34   10                                                            
CONECT   35   11                                                            
CONECT   36   12                                                            
CONECT   37   15                                                            
CONECT   38   15                                                            
CONECT   39   15                                                            
CONECT   40   16                                                            
CONECT   41   16                                                            
CONECT   42   16                                                            
MASTER        0    0    0    0    0    0    0    0   42    0   88    0
END

RDKit          3D

42 44  0  0  0  0  0  0  0  0999 V2000
   -5.2328    0.6774    1.2300 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4528   -0.6376    1.0449 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0588   -1.1474    2.4372 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5785   -2.5893    2.4824 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3055   -2.8639    1.6902 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4404   -2.9306    0.1495 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5610   -3.8985   -0.2677 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1067   -3.4360   -0.4521 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2098   -2.2087   -0.4365 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1452   -1.0582   -0.8183 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.5812   -1.5651   -0.5612 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.2670   -0.3823    0.1042 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.2263    0.3600    0.7564 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0345    0.2741   -0.0508 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1642    0.4282    0.8830 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0446    1.4606   -1.0303 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6154    1.4464    1.7067 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5771    1.0667    0.2658 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1199    0.5202    1.8532 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1405   -1.3486    0.5724 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3003   -0.4942    2.8864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9325   -1.0832    3.0997 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3716   -2.8293    3.5341 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3867   -3.2658    2.1864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5449   -2.1333    1.9872 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9271   -3.8360    2.0365 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5538   -4.0763   -1.3494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4417   -4.8710    0.2228 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5530   -3.5108   -0.0208 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6689   -4.2685    0.1085 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2426   -3.7724   -1.4883 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6166   -2.3068   -1.1483 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2352   -2.0991    0.5547 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0193   -0.8815   -1.8954 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0702   -1.7382   -1.5309 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6341    0.2595   -0.7094 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1753    1.4264    1.3372 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1115    0.2852    0.3537 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1106   -0.2704    1.7245 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9049    1.4205   -1.7072 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1340    1.4808   -1.6384 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1250    2.4110   -0.4902 H   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  1  0
  6  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
  3  2  1  0
 12 13  1  0
 12  2  1  0
 10 14  1  0
 11  6  1  0
  2  1  1  0
  6  5  1  0
  6  7  1  1
 14 13  1  0
  4  3  1  0
 14 15  1  1
 14 16  1  0
 11 12  1  0
 11 35  1  6
  5 25  1  0
  5 26  1  0
  4 23  1  0
  4 24  1  0
  3 21  1  0
  3 22  1  0
 12 36  1  6
  2 20  1  6
  8 30  1  0
  8 31  1  0
  9 32  1  0
  9 33  1  0
 10 34  1  6
  1 17  1  0
  1 18  1  0
  1 19  1  0
  7 27  1  0
  7 28  1  0
  7 29  1  0
 15 37  1  0
 15 38  1  0
 15 39  1  0
 16 40  1  0
 16 41  1  0
 16 42  1  0
M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₅H₂₆O

Average Mass

222.3720 Da

Monoisotopic Mass

222.19837 Da

IUPAC Name

(1R,4S,7R,11R,12S)-3,3,7,11-tetramethyl-2-oxatricyclo[5.4.1.0^{4,12}]dodecane

Traditional Name

(1R,4S,7R,11R,12S)-3,3,7,11-tetramethyl-2-oxatricyclo[5.4.1.0^{4,12}]dodecane

CAS Registry Number

Not Available

SMILES

[H]C([H])([H])[C@]1([H])C([H])([H])C([H])([H])C([H])([H])[C@]2(C([H])([H])[H])C([H])([H])C([H])([H])[C@@]3([H])[C@]2([H])[C@]1([H])OC3(C([H])([H])[H])C([H])([H])[H]

InChI Identifier

InChI=1S/C15H26O/c1-10-6-5-8-15(4)9-7-11-12(15)13(10)16-14(11,2)3/h10-13H,5-9H2,1-4H3/t10-,11+,12-,13-,15-/m1/s1

InChI Key

GAZOZLXFXCZLCJ-WPLOAARJSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, C₆D₆, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Saccobasis polita	JEOL database	Adio, A. M., et al, Phytochemistry 64, 637 (2003)

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as germacrane sesquiterpenoids. These are sesquiterpenoids having the germacrane skeleton, with a structure characterized by a cyclodecane ring substituted with an isopropyl and two methyl groups.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Sesquiterpenoids

Direct Parent

Germacrane sesquiterpenoids

Alternative Parents

Substituents

Germacrane sesquiterpenoid
Tetrahydrofuran
Oxacycle
Organoheterocyclic compound
Ether
Dialkyl ether
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.95	ALOGPS
logP	3.81	ChemAxon
logS	-5.7	ALOGPS
pKa (Strongest Basic)	-4.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	1	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	9.23 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	66.59 m³·mol⁻¹	ChemAxon
Polarizability	27.09 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

552957

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

637331

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Adio, A. M., et al. (2003). Adio, A. M., et al, Phytochemistry 64, 637 (2003). Phytochem..

Showing NP-Card for (+)-6,11-epoxy-isodaucane (NP0030879)

MOL for NP0030879 ((+)-6,11-epoxy-isodaucane)

3D MOL for NP0030879 ((+)-6,11-epoxy-isodaucane)

3D SDF for NP0030879 ((+)-6,11-epoxy-isodaucane)

3D-SDF for NP0030879 ((+)-6,11-epoxy-isodaucane)

PDB for NP0030879 ((+)-6,11-epoxy-isodaucane)

3D PDB for NP0030879 ((+)-6,11-epoxy-isodaucane)

SMILES for NP0030879 ((+)-6,11-epoxy-isodaucane)

INCHI for NP0030879 ((+)-6,11-epoxy-isodaucane)

Structure for NP0030879 ((+)-6,11-epoxy-isodaucane)

3D Structure for NP0030879 ((+)-6,11-epoxy-isodaucane)